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MELO3C016228 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C016228
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionRetrotransposon protein
Genome locationchr07:20765406..20765606
RNA-Seq ExpressionMELO3C016228
SyntenyMELO3C016228
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032141.1 retrotransposon protein [Cucumis melo var. makuwa]3.0e-1977.46Show/hide
Query:  GHFVETFTDIRSNEPTEYEVFDMPNGNEEFPSVYSQGIDMFQEDVRASK------GKVGSSKSKRKRGSQR
        GHF ETF +IRSNEP  YE FDMPNGNEEFPS+YSQGIDMFQEDVRAS+      G+VGSSKSKRKR SQR
Subjt:  GHFVETFTDIRSNEPTEYEVFDMPNGNEEFPSVYSQGIDMFQEDVRASK------GKVGSSKSKRKRGSQR

KAA0045003.1 retrotransposon protein [Cucumis melo var. makuwa]8.4e-2287.69Show/hide
Query:  GHFVETFTDIRSNEPTEYEVFDMPNGNEEFPSVYSQGIDMFQEDVRASKGKVGSSKSKRKRGSQR
        GHF ETFTDIR NEP  YEVFDMPNGNEEFPSVYSQGIDM QEDVRASKG+VGSS+SKRK GSQR
Subjt:  GHFVETFTDIRSNEPTEYEVFDMPNGNEEFPSVYSQGIDMFQEDVRASKGKVGSSKSKRKRGSQR

KAA0065782.1 retrotransposon protein [Cucumis melo var. makuwa]5.3e-1669.01Show/hide
Query:  GHFVETFTDIRSNEPTEYEVFDMPNGNEEFPSVYSQGIDMFQEDVRAS------KGKVGSSKSKRKRGSQR
        GHF ETFTD+ SNEP  YE FD+P+GN+EFPSVY+QGI+M QEDVRAS      +G+VGSS SKRKRGSQ+
Subjt:  GHFVETFTDIRSNEPTEYEVFDMPNGNEEFPSVYSQGIDMFQEDVRAS------KGKVGSSKSKRKRGSQR

KAA0066185.1 retrotransposon protein [Cucumis melo var. makuwa]2.0e-1569.57Show/hide
Query:  FVETFTDIRSNEPTEYEVFDMPNGNEEFPSVYSQGIDMFQEDVRASK------GKVGSSKSKRKRGSQR
        FVETF D+RSNEP EYE FDMPNGNEEFPS+Y+QGIDM Q+DVR S+      G+  SS+ KRKRGSQR
Subjt:  FVETFTDIRSNEPTEYEVFDMPNGNEEFPSVYSQGIDMFQEDVRASK------GKVGSSKSKRKRGSQR

TYK16470.1 retrotransposon protein [Cucumis melo var. makuwa]1.7e-27100Show/hide
Query:  MGHFVETFTDIRSNEPTEYEVFDMPNGNEEFPSVYSQGIDMFQEDVRASKGKVGSSKSKRKRGSQR
        MGHFVETFTDIRSNEPTEYEVFDMPNGNEEFPSVYSQGIDMFQEDVRASKGKVGSSKSKRKRGSQR
Subjt:  MGHFVETFTDIRSNEPTEYEVFDMPNGNEEFPSVYSQGIDMFQEDVRASKGKVGSSKSKRKRGSQR

TrEMBL top hitse value%identityAlignment
A0A5A7SRG8 Retrotransposon protein1.4e-1977.46Show/hide
Query:  GHFVETFTDIRSNEPTEYEVFDMPNGNEEFPSVYSQGIDMFQEDVRASK------GKVGSSKSKRKRGSQR
        GHF ETF +IRSNEP  YE FDMPNGNEEFPS+YSQGIDMFQEDVRAS+      G+VGSSKSKRKR SQR
Subjt:  GHFVETFTDIRSNEPTEYEVFDMPNGNEEFPSVYSQGIDMFQEDVRASK------GKVGSSKSKRKRGSQR

A0A5A7TNB5 Retrotransposon protein4.1e-2287.69Show/hide
Query:  GHFVETFTDIRSNEPTEYEVFDMPNGNEEFPSVYSQGIDMFQEDVRASKGKVGSSKSKRKRGSQR
        GHF ETFTDIR NEP  YEVFDMPNGNEEFPSVYSQGIDM QEDVRASKG+VGSS+SKRK GSQR
Subjt:  GHFVETFTDIRSNEPTEYEVFDMPNGNEEFPSVYSQGIDMFQEDVRASKGKVGSSKSKRKRGSQR

A0A5D3BD15 Retrotransposon protein2.6e-1669.01Show/hide
Query:  GHFVETFTDIRSNEPTEYEVFDMPNGNEEFPSVYSQGIDMFQEDVRAS------KGKVGSSKSKRKRGSQR
        GHF ETFTD+ SNEP  YE FD+P+GN+EFPSVY+QGI+M QEDVRAS      +G+VGSS SKRKRGSQ+
Subjt:  GHFVETFTDIRSNEPTEYEVFDMPNGNEEFPSVYSQGIDMFQEDVRAS------KGKVGSSKSKRKRGSQR

A0A5D3CUK6 Retrotransposon protein9.7e-1669.57Show/hide
Query:  FVETFTDIRSNEPTEYEVFDMPNGNEEFPSVYSQGIDMFQEDVRASK------GKVGSSKSKRKRGSQR
        FVETF D+RSNEP EYE FDMPNGNEEFPS+Y+QGIDM Q+DVR S+      G+  SS+ KRKRGSQR
Subjt:  FVETFTDIRSNEPTEYEVFDMPNGNEEFPSVYSQGIDMFQEDVRASK------GKVGSSKSKRKRGSQR

A0A5D3CYN6 Retrotransposon protein8.5e-28100Show/hide
Query:  MGHFVETFTDIRSNEPTEYEVFDMPNGNEEFPSVYSQGIDMFQEDVRASKGKVGSSKSKRKRGSQR
        MGHFVETFTDIRSNEPTEYEVFDMPNGNEEFPSVYSQGIDMFQEDVRASKGKVGSSKSKRKRGSQR
Subjt:  MGHFVETFTDIRSNEPTEYEVFDMPNGNEEFPSVYSQGIDMFQEDVRASKGKVGSSKSKRKRGSQR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCACTTCGTTGAGACATTCACGGACATAAGGTCTAACGAGCCTACCGAATATGAGGTGTTTGACATGCCCAATGGGAACGAGGAGTTCCCATCAGTATATAGCCA
AGGGATTGACATGTTCCAAGAGGATGTACGCGCGTCTAAGGGTAAGGTCGGATCGAGCAAATCGAAGAGGAAAAGGGGAAGCCAGCGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTCACTTCGTTGAGACATTCACGGACATAAGGTCTAACGAGCCTACCGAATATGAGGTGTTTGACATGCCCAATGGGAACGAGGAGTTCCCATCAGTATATAGCCA
AGGGATTGACATGTTCCAAGAGGATGTACGCGCGTCTAAGGGTAAGGTCGGATCGAGCAAATCGAAGAGGAAAAGGGGAAGCCAGCGATAG
Protein sequenceShow/hide protein sequence
MGHFVETFTDIRSNEPTEYEVFDMPNGNEEFPSVYSQGIDMFQEDVRASKGKVGSSKSKRKRGSQR