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MELO3C016376 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C016376
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionRNA-binding family protein isoform 1
Genome locationchr07:22227905..22233482
RNA-Seq ExpressionMELO3C016376
SyntenyMELO3C016376
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044809.1 uncharacterized protein E6C27_scaffold74G001000 [Cucumis melo var. makuwa]3.2e-6199.26Show/hide
Query:  MGASESALSRSLSTRSADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRKWQDEKVQEINKNQ
        MGASESALSRSLSTRSADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRKWQDEKVQEINKNQ
Subjt:  MGASESALSRSLSTRSADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRKWQDEKVQEINKNQ

Query:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLS
        EDIENKIEV DALAVKLLQRLNFSVSAVKSASQHLS
Subjt:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLS
XP_004146513.1 uncharacterized protein LOC101208248 [Cucumis sativus]3.0e-5996.35Show/hide
Query:  MGASESALSRSLSTRSADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRKWQDEKVQEINKNQ
        MGASESALSRS S R+ADVISTVSERSEAVDPILE LKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRKWQD KVQEINKNQ
Subjt:  MGASESALSRSLSTRSADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRKWQDEKVQEINKNQ

Query:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSE
        EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSE
Subjt:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSE
XP_008452067.1 PREDICTED: uncharacterized protein LOC103493183 [Cucumis melo]1.7e-62100Show/hide
Query:  MGASESALSRSLSTRSADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRKWQDEKVQEINKNQ
        MGASESALSRSLSTRSADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRKWQDEKVQEINKNQ
Subjt:  MGASESALSRSLSTRSADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRKWQDEKVQEINKNQ

Query:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSE
        EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSE
Subjt:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSE
XP_022942738.1 uncharacterized protein LOC111447685 [Cucurbita moschata]1.8e-5690.51Show/hide
Query:  MGASESALSRSLSTRSADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRKWQDEKVQEINKNQ
        MGASES+LS S   R ADVISTVSERSEAVDPILERLKSL+ITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFS+YR WQDE+VQ+INKNQ
Subjt:  MGASESALSRSLSTRSADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRKWQDEKVQEINKNQ

Query:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSE
        EDIENKIEVTDALAVKLLQRLNFSVSAVK+AS+HLSE
Subjt:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSE
XP_038891870.1 uncharacterized protein LOC120081229 [Benincasa hispida]1.1e-5894.89Show/hide
Query:  MGASESALSRSLSTRSADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRKWQDEKVQEINKNQ
        MGASESALSRS S R ADVISTVSERSEA DPILERL SLQITTPILQ+PP EGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRKWQDEKVQEINKNQ
Subjt:  MGASESALSRSLSTRSADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRKWQDEKVQEINKNQ

Query:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSE
        EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSE
Subjt:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSE
TrEMBL top hitse value%identityAlignment
A0A0A0KUT6 Uncharacterized protein1.5e-5996.35Show/hide
Query:  MGASESALSRSLSTRSADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRKWQDEKVQEINKNQ
        MGASESALSRS S R+ADVISTVSERSEAVDPILE LKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRKWQD KVQEINKNQ
Subjt:  MGASESALSRSLSTRSADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRKWQDEKVQEINKNQ

Query:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSE
        EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSE
Subjt:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSE
A0A1S3BSD9 uncharacterized protein LOC1034931838.3e-63100Show/hide
Query:  MGASESALSRSLSTRSADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRKWQDEKVQEINKNQ
        MGASESALSRSLSTRSADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRKWQDEKVQEINKNQ
Subjt:  MGASESALSRSLSTRSADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRKWQDEKVQEINKNQ

Query:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSE
        EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSE
Subjt:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSE
A0A5A7TU92 Uncharacterized protein1.6e-6199.26Show/hide
Query:  MGASESALSRSLSTRSADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRKWQDEKVQEINKNQ
        MGASESALSRSLSTRSADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRKWQDEKVQEINKNQ
Subjt:  MGASESALSRSLSTRSADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRKWQDEKVQEINKNQ

Query:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLS
        EDIENKIEV DALAVKLLQRLNFSVSAVKSASQHLS
Subjt:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLS
A0A5D3CYS3 Uncharacterized protein8.3e-63100Show/hide
Query:  MGASESALSRSLSTRSADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRKWQDEKVQEINKNQ
        MGASESALSRSLSTRSADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRKWQDEKVQEINKNQ
Subjt:  MGASESALSRSLSTRSADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRKWQDEKVQEINKNQ

Query:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSE
        EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSE
Subjt:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSE
A0A6J1J3L4 uncharacterized protein LOC1114814988.8e-5790.51Show/hide
Query:  MGASESALSRSLSTRSADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRKWQDEKVQEINKNQ
        MGASES+LS S   R ADVISTVSERSEAVDPILERLKSL+ITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFS+YR WQDE+VQ+INKNQ
Subjt:  MGASESALSRSLSTRSADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRKWQDEKVQEINKNQ

Query:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSE
        EDIENKIEVTDALAVKLLQRLNFSVSAVK+AS+HLSE
Subjt:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G66290.1 unknown protein1.0e-4167.15Show/hide
Query:  MGASESALSRSLSTRSADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRKWQDEKVQEINKNQ
        MGAS+S L  S   R  DVI+T+S RSE VDPILE LK+L ++ PIL+SPPTE SLTDILVRK  SSS++ TV+PQ+L+ELFSIYR+WQ+ K QEI K Q
Subjt:  MGASESALSRSLSTRSADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRKWQDEKVQEINKNQ

Query:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSE
        EDIENKIEV DALA KLLQR N SVSA+++ +QHLS+
Subjt:  EDIENKIEVTDALAVKLLQRLNFSVSAVKSASQHLSE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGCTTCAGAATCCGCACTCTCACGCTCTCTCTCAACGAGGTCAGCTGATGTAATCTCCACCGTGTCGGAGCGATCAGAAGCTGTTGATCCCATCTTAGAGAGGCT
CAAATCCCTTCAAATCACAACACCGATATTGCAGTCACCCCCTACGGAAGGTAGCCTGACAGATATCTTAGTTAGAAAACCGCCCTCTTCTTCAAATGCTGTTACTGTGA
ATCCCCAAGTGCTTTTGGAGCTCTTCTCGATATACCGTAAGTGGCAGGACGAAAAGGTCCAAGAGATCAACAAAAATCAGGAAGATATTGAGAACAAGATCGAAGTCACA
GATGCTTTGGCTGTTAAACTTCTTCAACGCTTAAATTTTTCTGTTTCTGCAGTTAAGTCAGCTTCCCAACATCTATCAGAAGCATTCATCCATTGTCAAATTTGCTGTTT
ACAGCAACGTTAA
mRNA sequenceShow/hide mRNA sequence
GAGCTTGAGCCGAAACCCATTTTCGGACTTAGTCGGGGGGCCTTCGATCCGCTGGGTTTCTCCATCCCCTTGATTATATCGGAGGTTTCACTGATCGGAAACTTGAGAAT
TTACGAACATGGGGGCTTCAGAATCCGCACTCTCACGCTCTCTCTCAACGAGGTCAGCTGATGTAATCTCCACCGTGTCGGAGCGATCAGAAGCTGTTGATCCCATCTTA
GAGAGGCTCAAATCCCTTCAAATCACAACACCGATATTGCAGTCACCCCCTACGGAAGGTAGCCTGACAGATATCTTAGTTAGAAAACCGCCCTCTTCTTCAAATGCTGT
TACTGTGAATCCCCAAGTGCTTTTGGAGCTCTTCTCGATATACCGTAAGTGGCAGGACGAAAAGGTCCAAGAGATCAACAAAAATCAGGAAGATATTGAGAACAAGATCG
AAGTCACAGATGCTTTGGCTGTTAAACTTCTTCAACGCTTAAATTTTTCTGTTTCTGCAGTTAAGTCAGCTTCCCAACATCTATCAGAAGCATTCATCCATTGTCAAATT
TGCTGTTTACAGCAACGTTAAGCTGTCAAGAAAATGTCCTAAAGCAGTGTCCCAAAATCAAAATCTGGACCGCTGACCGTAGTAGCCTCTGTGAAAGGAGTTGGCTCCCA
CTAAAATCGCCACCGGCAGACCGATCAACCAACCAGCGGCCCAAGGCAGAGGCAACAGCCACATTACGAACTTCTCCTCTCTAGCCATTTCGTCCCCTGGGAGTTCCCCA
CCGATGTCACCTTCTCGTCTTGCTTGTTAAGATCCATCTTCTAGAGCCTGAACACACCACGTGACCCATTTTAATAAATCACATTGATTGTAAGATGGTACTGTCGGTGC
TTTCACCTAAGCTATAGCCTCAATTTTTAAGTGTTTTTAAAGGTTGATTTGTCTGAAACTCCATTTAAAAATAATGCAATCACG
Protein sequenceShow/hide protein sequence
MGASESALSRSLSTRSADVISTVSERSEAVDPILERLKSLQITTPILQSPPTEGSLTDILVRKPPSSSNAVTVNPQVLLELFSIYRKWQDEKVQEINKNQEDIENKIEVT
DALAVKLLQRLNFSVSAVKSASQHLSEAFIHCQICCLQQR