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MELO3C016549 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C016549
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionU3 small nucleolar RNA-associated protein 14 B isoform 1
Genome locationchr06:26097910..26100750
RNA-Seq ExpressionMELO3C016549
SyntenyMELO3C016549
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149291.1 uncharacterized protein LOC101205846 [Cucumis sativus]3.9e-8792.61Show/hide
Query:  MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQRVFGKHRGFKGKRGRLIVARFNQGFGFNGG------GGDGG
        MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVV C PSGLRLRFYG RL FPGGGWV+QRVFGKH GFKGKRGRLIVARFNQGFGFNGG      GGDGG
Subjt:  MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQRVFGKHRGFKGKRGRLIVARFNQGFGFNGG------GGDGG

Query:  DDGATARLLGNIALAAGLTYLSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK
        DDGATARL+GNIALAAGLTYLSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK
Subjt:  DDGATARLLGNIALAAGLTYLSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK

XP_008452285.1 PREDICTED: uncharacterized protein LOC103493356 [Cucumis melo]2.1e-93100Show/hide
Query:  MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQRVFGKHRGFKGKRGRLIVARFNQGFGFNGGGGDGGDDGATA
        MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQRVFGKHRGFKGKRGRLIVARFNQGFGFNGGGGDGGDDGATA
Subjt:  MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQRVFGKHRGFKGKRGRLIVARFNQGFGFNGGGGDGGDDGATA

Query:  RLLGNIALAAGLTYLSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK
        RLLGNIALAAGLTYLSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK
Subjt:  RLLGNIALAAGLTYLSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK

XP_022985259.1 uncharacterized protein LOC111483302 [Cucurbita maxima]4.0e-6880.81Show/hide
Query:  MTSFIRFSTFN-ILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQRVFGKHRGFKGKRGRLIVARFNQGFGFN-GGGGDGGDDGA
        MTSFIRFS+FN +LH+NF  KPT+FNPLPPPKV  C+ +G RLR  G +L F  GGW  + V GK+  FKGKRG LIVARFNQGFGFN GGGG GGDDGA
Subjt:  MTSFIRFSTFN-ILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQRVFGKHRGFKGKRGRLIVARFNQGFGFN-GGGGDGGDDGA

Query:  TARLLGNIALAAGLTYLSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK
        TARLLGNIALAAGLTYLSVTGQLGW+LDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQS CPNCGNEFQIFK
Subjt:  TARLLGNIALAAGLTYLSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK

XP_038905448.1 uncharacterized protein LOC120091477 isoform X1 [Benincasa hispida]6.2e-6983.14Show/hide
Query:  MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQRVFGKHRGFKGKRGRLIVARFNQGFGFN--GGGGDGGDDGA
        MTSFIRFST NILH++FCNKPTKFNPLP PKV   + +G RLR YGRRL F        RVFGKH G KGKRG LIVARFNQGFGFN  GGGG GGDDGA
Subjt:  MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQRVFGKHRGFKGKRGRLIVARFNQGFGFN--GGGGDGGDDGA

Query:  TARLLGNIALAAGLTYLSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK
        TARLLGNIALA GLTYLSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQS CPNCGNEFQIFK
Subjt:  TARLLGNIALAAGLTYLSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK

XP_038905451.1 uncharacterized protein LOC120091477 isoform X2 [Benincasa hispida]6.2e-6983.14Show/hide
Query:  MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQRVFGKHRGFKGKRGRLIVARFNQGFGFN--GGGGDGGDDGA
        MTSFIRFST NILH++FCNKPTKFNPLP PKV   + +G RLR YGRRL F        RVFGKH G KGKRG LIVARFNQGFGFN  GGGG GGDDGA
Subjt:  MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQRVFGKHRGFKGKRGRLIVARFNQGFGFN--GGGGDGGDDGA

Query:  TARLLGNIALAAGLTYLSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK
        TARLLGNIALA GLTYLSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQS CPNCGNEFQIFK
Subjt:  TARLLGNIALAAGLTYLSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK

TrEMBL top hitse value%identityAlignment
A0A0A0L5A4 Uncharacterized protein1.9e-8792.61Show/hide
Query:  MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQRVFGKHRGFKGKRGRLIVARFNQGFGFNGG------GGDGG
        MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVV C PSGLRLRFYG RL FPGGGWV+QRVFGKH GFKGKRGRLIVARFNQGFGFNGG      GGDGG
Subjt:  MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQRVFGKHRGFKGKRGRLIVARFNQGFGFNGG------GGDGG

Query:  DDGATARLLGNIALAAGLTYLSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK
        DDGATARL+GNIALAAGLTYLSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK
Subjt:  DDGATARLLGNIALAAGLTYLSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK

A0A1S3BUA7 uncharacterized protein LOC1034933561.0e-93100Show/hide
Query:  MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQRVFGKHRGFKGKRGRLIVARFNQGFGFNGGGGDGGDDGATA
        MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQRVFGKHRGFKGKRGRLIVARFNQGFGFNGGGGDGGDDGATA
Subjt:  MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQRVFGKHRGFKGKRGRLIVARFNQGFGFNGGGGDGGDDGATA

Query:  RLLGNIALAAGLTYLSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK
        RLLGNIALAAGLTYLSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK
Subjt:  RLLGNIALAAGLTYLSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK

A0A5A7TVG5 Uncharacterized protein1.0e-93100Show/hide
Query:  MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQRVFGKHRGFKGKRGRLIVARFNQGFGFNGGGGDGGDDGATA
        MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQRVFGKHRGFKGKRGRLIVARFNQGFGFNGGGGDGGDDGATA
Subjt:  MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQRVFGKHRGFKGKRGRLIVARFNQGFGFNGGGGDGGDDGATA

Query:  RLLGNIALAAGLTYLSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK
        RLLGNIALAAGLTYLSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK
Subjt:  RLLGNIALAAGLTYLSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK

A0A6J1EMN9 uncharacterized protein LOC1114359817.4e-6880.23Show/hide
Query:  MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQRVFGKHRGFKGKRGRLIVARFNQGFGFNGG--GGDGGDDGA
        MTSFIRFS+FN+LH+NF  KPT+FNPLPPPKV  C+ +G RLR    +L F  GGW    V GK+  FKGKRG LIVARFNQGFGFNGG  GG GGDDGA
Subjt:  MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQRVFGKHRGFKGKRGRLIVARFNQGFGFNGG--GGDGGDDGA

Query:  TARLLGNIALAAGLTYLSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK
        TARLLGNIALAAGLTYLSVTGQLGW+LDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQS CPNCGNEFQIFK
Subjt:  TARLLGNIALAAGLTYLSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK

A0A6J1JCT5 uncharacterized protein LOC1114833021.9e-6880.81Show/hide
Query:  MTSFIRFSTFN-ILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQRVFGKHRGFKGKRGRLIVARFNQGFGFN-GGGGDGGDDGA
        MTSFIRFS+FN +LH+NF  KPT+FNPLPPPKV  C+ +G RLR  G +L F  GGW  + V GK+  FKGKRG LIVARFNQGFGFN GGGG GGDDGA
Subjt:  MTSFIRFSTFN-ILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQRVFGKHRGFKGKRGRLIVARFNQGFGFN-GGGGDGGDDGA

Query:  TARLLGNIALAAGLTYLSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK
        TARLLGNIALAAGLTYLSVTGQLGW+LDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQS CPNCGNEFQIFK
Subjt:  TARLLGNIALAAGLTYLSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G27390.1 unknown protein1.4e-3174.68Show/hide
Query:  DGGDDGATARLLGNIALAAGLTYLSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK
        +GGD+    R+LGN+ALA GLTYLS+TGQLGW+LDAIVS+WL+ V+VPI+G+ AF WWA RDIVQSNCPNCGNEFQIFK
Subjt:  DGGDDGATARLLGNIALAAGLTYLSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAGTTTCATCAGATTTTCTACCTTCAACATACTACACAACAATTTTTGCAACAAACCCACCAAATTCAATCCTCTTCCCCCTCCCAAGGTTGTCATCTGC
AATCCGAGTGGGCTTCGTTTGAGGTTTTATGGGCGGAGATTGTTCTTTCCGGGTGGTGGTTGGGTTGAACAACGGGTTTTTGGAAAACATAGAGGGTTTAAGGGA
AAAAGAGGGCGGCTAATTGTTGCAAGGTTTAATCAGGGTTTTGGGTTTAACGGCGGCGGCGGTGACGGCGGAGACGATGGGGCAACTGCAAGGCTTCTGGGTAAT
ATTGCTTTGGCTGCTGGCTTAACTTACCTTTCGGTGACAGGGCAGCTTGGCTGGGTTTTGGATGCCATTGTTTCCATTTGGCTTGTTGCAGTTCTTGTACCAATT
GTTGGAGTGGCCGCTTTTATATGGTGGGCAGGACGTGATATAGTTCAAAGCAATTGCCCTAACTGTGGAAATGAATTTCAAATATTCAAGTAA
mRNA sequenceShow/hide mRNA sequence
GAATTCCAACCTCATTTTTTTTCTGTAAAGGGACCAACAACGGCCACAGGATAACGAGGCAGCCGTATACGGAACAATCAATAACATCTTACTCACACTCACTCC
AGATAATCAATAATCCATCATGAATTTCTTCTTCACGTCTCAGATTTCAAACCCTGCTTCCTAATACTTCCTTCATTCCCAAATGACAAGTTTCATCAGATTTTC
TACCTTCAACATACTACACAACAATTTTTGCAACAAACCCACCAAATTCAATCCTCTTCCCCCTCCCAAGGTTGTCATCTGCAATCCGAGTGGGCTTCGTTTGAG
GTTTTATGGGCGGAGATTGTTCTTTCCGGGTGGTGGTTGGGTTGAACAACGGGTTTTTGGAAAACATAGAGGGTTTAAGGGAAAAAGAGGGCGGCTAATTGTTGC
AAGGTTTAATCAGGGTTTTGGGTTTAACGGCGGCGGCGGTGACGGCGGAGACGATGGGGCAACTGCAAGGCTTCTGGGTAATATTGCTTTGGCTGCTGGCTTAAC
TTACCTTTCGGTGACAGGGCAGCTTGGCTGGGTTTTGGATGCCATTGTTTCCATTTGGCTTGTTGCAGTTCTTGTACCAATTGTTGGAGTGGCCGCTTTTATATG
GTGGGCAGGACGTGATATAGTTCAAAGCAATTGCCCTAACTGTGGAAATGAATTTCAAATATTCAAGTAAGTGATCTTGAAAGAACTTGTTTGAGGAGATAACTC
GATCTTGAAATGATTAGCACACTTCATTTACATCCATATTACAGATCAACACTAAATGAAGAGCTGCAACTGTGCCCTTTTTGTAGCCAACCTTTCTCTGTGGTG
GATGACAAGTTTGTGAGGGACTCGGTGACGTTCTCCAAGAAAACTTCTTCCACCTTTGGACAGGCTTTTAGTGACTTTACTTCTCCCAGAAAAGGAAACTTCTGG
TGCAGTTGTCGACATAGAAGCAGAAGTAAAAGATGTGGACTGAACTCGTCTTGGTAAGCGGTTGATTTTGTTGTTGACCGTAGTCTTAAGATACTTGTAAGTGTT
CAAATAGCATGCTTTTTCTTATGCAATGCTTGTGAACCATGGATTACAGTTAGTAGTCTTCAGAAGCACATCAAAATTTAGGGGGACAAGATCAGTTGGTTCAAT
TGGGTTTGCCAGATTGAATTAATTTTTGACACTGGAGATCTTTGTATATTCGTTATATGTTCTTCATGGGTAGAATTTCCAATTCTGAAACAACTGTAGAAATTT
GTGAAATGCCTTCACTTTTTGTATATTGATTTTGATACAATAAGTCTAAGGTACAGGCTTTACTCTATAACTAATAAAGACTGATGGACTACAACAT
Protein sequenceShow/hide protein sequence
MTSFIRFSTFNILHNNFCNKPTKFNPLPPPKVVICNPSGLRLRFYGRRLFFPGGGWVEQRVFGKHRGFKGKRGRLIVARFNQGFGFNGGGGDGGDDGATARLLGN
IALAAGLTYLSVTGQLGWVLDAIVSIWLVAVLVPIVGVAAFIWWAGRDIVQSNCPNCGNEFQIFK