CuGenDBv2

Gene ID	MELO3C016559
Organism	Cucumis melo DHL92 (Melon (DHL92) v4)
Description	cullin 1
Genome location	chr06:26015087..26015654
RNA-Seq Expression	MELO3C016559
Synteny	MELO3C016559
Gene Ontology terms	GO:0006511 - ubiquitin-dependent protein catabolic process (biological process) GO:0016567 - protein ubiquitination (biological process) GO:0031461 - cullin-RING ubiquitin ligase complex (cellular component) GO:0004842 - ubiquitin-protein transferase activity (molecular function) GO:0008168 - methyltransferase activity (molecular function) GO:0031625 - ubiquitin protein ligase binding (molecular function)
InterPro domains	IPR001373 - Cullin, N-terminal IPR036317 - Cullin homology domain superfamily IPR045093 - Cullin

Homology

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GenBank top hits

e value

%identity

Alignment

ANC90259.1 cullin 1 [Vitis pseudoreticulata]

1.2e-13

83.33

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Query:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEKVVKLLAY
        EAFEVFCNKGVA SSS E LVTFCDNILKK   EKLSD+ I+ETLEKVVKLLAY
Subjt:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEKVVKLLAY

AQX44143.1 cullin 1 [Apostasia odorata]

2.6e-13

81.48

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Query:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEKVVKLLAY
        EAFEVFCNKGVA SSS E L TFCDNILKK   EKLSD+ I+ETLEKVVKLLAY
Subjt:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEKVVKLLAY

KAF2310979.1 hypothetical protein GH714_018889 [Hevea brasiliensis]

4.0e-14

68.12

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Query:  EKKKVIGDVDKDRRYEAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEKVVKLLAY
        +KK ++G + +    EAFEVFCNKGVA SSS E L TFCDNILKK   EKLSD+ I+ETLEKVVKLLAY
Subjt:  EKKKVIGDVDKDRRYEAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEKVVKLLAY

KAG6597512.1 Cullin-1, partial [Cucurbita argyrosperma subsp. sororia]

2.0e-13

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Query:  EKKKVIGDVDK-DRRYEAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEKVVKLLAY
        EK+ VIG  ++     EAFEVFCNKGVA SSS E L TFCDNILKK   EKLSD+ I+ETLEKVVKLLAY
Subjt:  EKKKVIGDVDK-DRRYEAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEKVVKLLAY

KAG8483254.1 hypothetical protein CXB51_022272 [Gossypium anomalum]

8.9e-14

68.12

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Query:  EKKKVIGDVDKDRRYEAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEKVVKLLAY
        +KK V+G + +    EAFEVFCNKGV  SSS E L TFCDNILKK   EKLSD+ I+ETLEKVVKLLAY
Subjt:  EKKKVIGDVDKDRRYEAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEKVVKLLAY

TrEMBL top hits

e value

%identity

Alignment

A0A172MAB9 Cullin 1

5.6e-14

83.33

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Query:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEKVVKLLAY
        EAFEVFCNKGVA SSS E LVTFCDNILKK   EKLSD+ I+ETLEKVVKLLAY
Subjt:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEKVVKLLAY

A0A1S6YFU7 Cullin 1

1.3e-13

81.48

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Query:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEKVVKLLAY
        EAFEVFCNKGVA SSS E L TFCDNILKK   EKLSD+ I+ETLEKVVKLLAY
Subjt:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEKVVKLLAY

A0A2I0B578 Cullin-1

1.3e-13

81.48

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Query:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEKVVKLLAY
        EAFEVFCNKGVA SSS E L TFCDNILKK   EKLSD+ I+ETLEKVVKLLAY
Subjt:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEKVVKLLAY

A0A6A6MG60 CULLIN_2 domain-containing protein

1.9e-14

68.12

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Query:  EKKKVIGDVDKDRRYEAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEKVVKLLAY
        +KK ++G + +    EAFEVFCNKGVA SSS E L TFCDNILKK   EKLSD+ I+ETLEKVVKLLAY
Subjt:  EKKKVIGDVDKDRRYEAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEKVVKLLAY

A0A6J1KEU4 cullin-1-like

1.6e-13

81.48

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Query:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEKVVKLLAY
        EAFEVFCNKGVA SSS E L TFCDNILKK   EKLSD+ I+ETLEKVVKLLAY
Subjt:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEKVVKLLAY

SwissProt top hits

e value

%identity

Alignment

P0CH31 Putative cullin-like protein 1

3.6e-10

65.45

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Query:  EAFEVFCNKGVARSSSIEFLVTFCDNILK-KSEREKLSDKKIKETLEKVVKLLAY
        EAFEVFCNK VA +SS E L T+CDNILK +   EKLSD+  + TLEKVV LL Y
Subjt:  EAFEVFCNKGVARSSSIEFLVTFCDNILK-KSEREKLSDKKIKETLEKVVKLLAY

Q5ZC88 Cullin-1

4.9e-15

75.93

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Query:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEKVVKLLAY
        EAFEVFCNKGV+ SSS E L TFCDNILKK   EKLSD+ I++TLEKVV+LLAY
Subjt:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEKVVKLLAY

Q94AH6 Cullin-1

1.1e-14

75.93

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Query:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEKVVKLLAY
        EAFE+FCNK VA SSS E L TFCDNILKK   EKLSD+ I++TLEKVVKLLAY
Subjt:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEKVVKLLAY

Q9SRZ0 Cullin-2

3.1e-09

63.64

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Query:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSER-EKLSDKKIKETLEKVVKLLAY
        EAFEVFCNK VA  SS E L T+CDNILK     EKL ++ ++ TLEKVVKLL Y
Subjt:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSER-EKLSDKKIKETLEKVVKLLAY

Arabidopsis top hits

e value

%identity

Alignment

AT1G43140.1 Cullin family protein

2.6e-11

65.45

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Query:  EAFEVFCNKGVARSSSIEFLVTFCDNILK-KSEREKLSDKKIKETLEKVVKLLAY
        EAFEVFCNK VA +SS E L T+CDNILK +   EKLSD+  + TLEKVV LL Y
Subjt:  EAFEVFCNKGVARSSSIEFLVTFCDNILK-KSEREKLSDKKIKETLEKVVKLLAY

AT4G02570.1 cullin 1

7.7e-16

75.93

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Query:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEKVVKLLAY
        EAFE+FCNK VA SSS E L TFCDNILKK   EKLSD+ I++TLEKVVKLLAY
Subjt:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEKVVKLLAY

AT4G02570.2 cullin 1

7.7e-16

75.93

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Query:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEKVVKLLAY
        EAFE+FCNK VA SSS E L TFCDNILKK   EKLSD+ I++TLEKVVKLLAY
Subjt:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEKVVKLLAY

AT4G02570.3 cullin 1

7.7e-16

75.93

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Query:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEKVVKLLAY
        EAFE+FCNK VA SSS E L TFCDNILKK   EKLSD+ I++TLEKVVKLLAY
Subjt:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEKVVKLLAY

AT4G02570.4 cullin 1

7.7e-16

75.93

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Query:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEKVVKLLAY
        EAFE+FCNK VA SSS E L TFCDNILKK   EKLSD+ I++TLEKVVKLLAY
Subjt:  EAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEKVVKLLAY

Sequences

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CDS sequence

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ATGAATGTGGTGTTGTTTGTTGTGTGCATCCCTCTTCCGCTTGTGGATGAGAAAAAGAAAGTCATTGGAGATGTTGACAAGGATCGAAGGTATGAAGCTTTTGAAGTTTT
TTGCAATAAGGGTGTTGCTAGAAGTTCTAGTATAGAATTTCTTGTTACCTTTTGTGATAACATCCTTAAGAAAAGTGAGAGAGAGAAGTTGAGTGATAAAAAAATCAAGG
AGACACTTGAGAAGGTTGTGAAGTTGTTAGCATACAGACAAAGATCTGTTTGCTGA

mRNA sequence

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Protein sequence

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MNVVLFVVCIPLPLVDEKKKVIGDVDKDRRYEAFEVFCNKGVARSSSIEFLVTFCDNILKKSEREKLSDKKIKETLEKVVKLLAYRQRSVC

MELO3C016559 (gene) of Melon (DHL92) v4 genome