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MELO3C016677 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C016677
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionPentatricopeptide repeat (PPR) superfamily protein, putative
Genome locationchr07:2877168..2877413
RNA-Seq ExpressionMELO3C016677
SyntenyMELO3C016677
Gene Ontology termsGO:0010154 - fruit development (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064307.1 putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]4.3e-32100Show/hide
Query:  MIFKGYVPRNESINKLVDRLCQECNMELLWMVLNSLGRGNRMNMDTWARVVAFLYKENLLESSNLIDSLIS
        MIFKGYVPRNESINKLVDRLCQECNMELLWMVLNSLGRGNRMNMDTWARVVAFLYKENLLESSNLIDSLIS
Subjt:  MIFKGYVPRNESINKLVDRLCQECNMELLWMVLNSLGRGNRMNMDTWARVVAFLYKENLLESSNLIDSLIS
XP_004146077.1 putative pentatricopeptide repeat-containing protein At1g53330 [Cucumis sativus]3.1e-3094.37Show/hide
Query:  MIFKGYVPRNESINKLVDRLCQECNMELLWMVLNSLGRGNRMNMDTWARVVAFLYKENLLESSNLIDSLIS
        MIFKGYVPRNESINKLVDRLCQECNMELLWM+LNSLGRGNRMNMD WARVVAF+YKENL ESSNLIDSLIS
Subjt:  MIFKGYVPRNESINKLVDRLCQECNMELLWMVLNSLGRGNRMNMDTWARVVAFLYKENLLESSNLIDSLIS
XP_008452430.1 PREDICTED: putative pentatricopeptide repeat-containing protein At1g53330 [Cucumis melo]4.3e-32100Show/hide
Query:  MIFKGYVPRNESINKLVDRLCQECNMELLWMVLNSLGRGNRMNMDTWARVVAFLYKENLLESSNLIDSLIS
        MIFKGYVPRNESINKLVDRLCQECNMELLWMVLNSLGRGNRMNMDTWARVVAFLYKENLLESSNLIDSLIS
Subjt:  MIFKGYVPRNESINKLVDRLCQECNMELLWMVLNSLGRGNRMNMDTWARVVAFLYKENLLESSNLIDSLIS
XP_022131752.1 putative pentatricopeptide repeat-containing protein At1g53330 [Momordica charantia]5.7e-2477.46Show/hide
Query:  MIFKGYVPRNESINKLVDRLCQECNMELLWMVLNSLGRGNRMNMDTWARVVAFLYKENLLESSNLIDSLIS
        MIFKGYVPR+ESINKLVD LCQEC++ELLWMVL+SLGRGN MNMDTWARV+A + KEN+ E+S L+DSL+S
Subjt:  MIFKGYVPRNESINKLVDRLCQECNMELLWMVLNSLGRGNRMNMDTWARVVAFLYKENLLESSNLIDSLIS
XP_038898311.1 LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g53330 [Benincasa hispida]2.5e-2787.32Show/hide
Query:  MIFKGYVPRNESINKLVDRLCQECNMELLWMVLNSLGRGNRMNMDTWARVVAFLYKENLLESSNLIDSLIS
        MIFKGYVP +ESINKLVDRLCQECNMELLWMV+NSLGRGNRMN+DTWAR+VAF+ KE L ESSNLIDSLIS
Subjt:  MIFKGYVPRNESINKLVDRLCQECNMELLWMVLNSLGRGNRMNMDTWARVVAFLYKENLLESSNLIDSLIS
TrEMBL top hitse value%identityAlignment
A0A0A0KZF4 Uncharacterized protein1.5e-3094.37Show/hide
Query:  MIFKGYVPRNESINKLVDRLCQECNMELLWMVLNSLGRGNRMNMDTWARVVAFLYKENLLESSNLIDSLIS
        MIFKGYVPRNESINKLVDRLCQECNMELLWM+LNSLGRGNRMNMD WARVVAF+YKENL ESSNLIDSLIS
Subjt:  MIFKGYVPRNESINKLVDRLCQECNMELLWMVLNSLGRGNRMNMDTWARVVAFLYKENLLESSNLIDSLIS
A0A1S3BT71 putative pentatricopeptide repeat-containing protein At1g533302.1e-32100Show/hide
Query:  MIFKGYVPRNESINKLVDRLCQECNMELLWMVLNSLGRGNRMNMDTWARVVAFLYKENLLESSNLIDSLIS
        MIFKGYVPRNESINKLVDRLCQECNMELLWMVLNSLGRGNRMNMDTWARVVAFLYKENLLESSNLIDSLIS
Subjt:  MIFKGYVPRNESINKLVDRLCQECNMELLWMVLNSLGRGNRMNMDTWARVVAFLYKENLLESSNLIDSLIS
A0A5A7VBA5 Putative pentatricopeptide repeat-containing protein2.1e-32100Show/hide
Query:  MIFKGYVPRNESINKLVDRLCQECNMELLWMVLNSLGRGNRMNMDTWARVVAFLYKENLLESSNLIDSLIS
        MIFKGYVPRNESINKLVDRLCQECNMELLWMVLNSLGRGNRMNMDTWARVVAFLYKENLLESSNLIDSLIS
Subjt:  MIFKGYVPRNESINKLVDRLCQECNMELLWMVLNSLGRGNRMNMDTWARVVAFLYKENLLESSNLIDSLIS
A0A6J1BRW9 putative pentatricopeptide repeat-containing protein At1g533302.7e-2477.46Show/hide
Query:  MIFKGYVPRNESINKLVDRLCQECNMELLWMVLNSLGRGNRMNMDTWARVVAFLYKENLLESSNLIDSLIS
        MIFKGYVPR+ESINKLVD LCQEC++ELLWMVL+SLGRGN MNMDTWARV+A + KEN+ E+S L+DSL+S
Subjt:  MIFKGYVPRNESINKLVDRLCQECNMELLWMVLNSLGRGNRMNMDTWARVVAFLYKENLLESSNLIDSLIS
A0A6J1J467 putative pentatricopeptide repeat-containing protein At1g533302.0e-2277.46Show/hide
Query:  MIFKGYVPRNESINKLVDRLCQECNMELLWMVLNSLGRGNRMNMDTWARVVAFLYKENLLESSNLIDSLIS
        MIFKGYVPR+ESINKL+DRLCQE NMELLWMV NSLGRGN MN+D WARVVAF+ KE   E+S L+D LIS
Subjt:  MIFKGYVPRNESINKLVDRLCQECNMELLWMVLNSLGRGNRMNMDTWARVVAFLYKENLLESSNLIDSLIS
SwissProt top hitse value%identityAlignment
Q9MAG8 Putative pentatricopeptide repeat-containing protein At1g533301.2e-0533.8Show/hide
Query:  MIFKGYVPRNESINKLVDRLCQECNMELLWMVLNSLGRGNRMNMDTWARVVAFLYKENLLESSNLIDSLIS
        M+FKGY PR + +   + +LC+   +E+L  V++SL RG   + D W+ ++  + KE ++  S  ID L++
Subjt:  MIFKGYVPRNESINKLVDRLCQECNMELLWMVLNSLGRGNRMNMDTWARVVAFLYKENLLESSNLIDSLIS
Arabidopsis top hitse value%identityAlignment
AT1G53330.1 Pentatricopeptide repeat (PPR) superfamily protein8.8e-0733.8Show/hide
Query:  MIFKGYVPRNESINKLVDRLCQECNMELLWMVLNSLGRGNRMNMDTWARVVAFLYKENLLESSNLIDSLIS
        M+FKGY PR + +   + +LC+   +E+L  V++SL RG   + D W+ ++  + KE ++  S  ID L++
Subjt:  MIFKGYVPRNESINKLVDRLCQECNMELLWMVLNSLGRGNRMNMDTWARVVAFLYKENLLESSNLIDSLIS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCTTCAAGGGTTATGTGCCTCGTAATGAAAGCATAAACAAACTCGTAGACAGGTTGTGCCAGGAATGCAATATGGAGCTGTTGTGGATGGTCTTAAACAGT
CTGGGAAGAGGAAATCGCATGAATATGGACACGTGGGCTAGAGTTGTTGCTTTTCTTTACAAGGAGAACCTATTGGAATCCTCCAACTTAATTGACTCATTGATC
AGTTGA
mRNA sequenceShow/hide mRNA sequence
CTAAAGGAAGCAACTTCCATACTGGACGAGATGATCTTCAAGGGTTATGTGCCTCGTAATGAAAGCATAAACAAACTCGTAGACAGGTTGTGCCAGGAATGCAAT
ATGGAGCTGTTGTGGATGGTCTTAAACAGTCTGGGAAGAGGAAATCGCATGAATATGGACACGTGGGCTAGAGTTGTTGCTTTTCTTTACAAGGAGAACCTATTG
GAATCCTCCAACTTAATTGACTCATTGATCAGTTGA
Protein sequenceShow/hide protein sequence
MIFKGYVPRNESINKLVDRLCQECNMELLWMVLNSLGRGNRMNMDTWARVVAFLYKENLLESSNLIDSLIS