; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C016785 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C016785
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
Descriptionprotein DCL, chloroplastic
Genome locationchr07:2054310..2058852
RNA-Seq ExpressionMELO3C016785
SyntenyMELO3C016785
Gene Ontology termsGO:0009658 - chloroplast organization (biological process)
GO:1901259 - chloroplast rRNA processing (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR044673 - Protein DCL-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649869.1 hypothetical protein Csa_012968 [Cucumis sativus]3.0e-10292.08Show/hide
Query:  MAASFLFRGHPLLRLGLKRRGLCTGVVQVTRRSCCSATVASTPSDGDLTAGDNATSLVSSSEPPKYQRWDEPDYRKWKNQEEEILGDIEPIIFLTKEILH
        MAASFLFRGHPLLRLGLKRRG CTG+VQVT R CCSAT ASTPSDGDLTAGDNATS+VS SEPPKY RWDEPDYRKWKNQEEEILGDIEPIIFLTKEILH
Subjt:  MAASFLFRGHPLLRLGLKRRGLCTGVVQVTRRSCCSATVASTPSDGDLTAGDNATSLVSSSEPPKYQRWDEPDYRKWKNQEEEILGDIEPIIFLTKEILH

Query:  SHSRALGQAYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKR
        SH       YADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFR SRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKR
Subjt:  SHSRALGQAYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKR

Query:  GS
        GS
Subjt:  GS

KAG6608449.1 Protein DCL-like, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.9e-8978.71Show/hide
Query:  MAASFLFRGHPLLRLGLKRRGLCTGVVQVTRRSCCSATVASTPSDGDLTAGDNATSLVSSSEPPKYQRWDEPDYRKWKNQEEEILGDIEPIIFLTKEILH
        M AS L RGHPL+RLGL+ RGLCTG+VQVTRRSCC+A  ASTP  G L++ +N TS++S+++PPKYQRWDEP YRKWKNQEEEIL DI+P+I LTKEILH
Subjt:  MAASFLFRGHPLLRLGLKRRGLCTGVVQVTRRSCCSATVASTPSDGDLTAGDNATSLVSSSEPPKYQRWDEPDYRKWKNQEEEILGDIEPIIFLTKEILH

Query:  SHSRALGQAYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKR
        S+       Y DGERLT EDE+ VVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRC FVIRTDGGWIDFSYQKCLRAYIRNKYP +AERFIREHFKR
Subjt:  SHSRALGQAYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKR

Query:  GS
        GS
Subjt:  GS

XP_004141276.2 protein DCL, chloroplastic [Cucumis sativus]3.0e-10292.08Show/hide
Query:  MAASFLFRGHPLLRLGLKRRGLCTGVVQVTRRSCCSATVASTPSDGDLTAGDNATSLVSSSEPPKYQRWDEPDYRKWKNQEEEILGDIEPIIFLTKEILH
        MAASFLFRGHPLLRLGLKRRG CTG+VQVT R CCSAT ASTPSDGDLTAGDNATS+VS SEPPKY RWDEPDYRKWKNQEEEILGDIEPIIFLTKEILH
Subjt:  MAASFLFRGHPLLRLGLKRRGLCTGVVQVTRRSCCSATVASTPSDGDLTAGDNATSLVSSSEPPKYQRWDEPDYRKWKNQEEEILGDIEPIIFLTKEILH

Query:  SHSRALGQAYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKR
        SH       YADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFR SRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKR
Subjt:  SHSRALGQAYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKR

Query:  GS
        GS
Subjt:  GS

XP_008452601.1 PREDICTED: protein DCL, chloroplastic [Cucumis melo]6.2e-10896.53Show/hide
Query:  MAASFLFRGHPLLRLGLKRRGLCTGVVQVTRRSCCSATVASTPSDGDLTAGDNATSLVSSSEPPKYQRWDEPDYRKWKNQEEEILGDIEPIIFLTKEILH
        MAASFLFRGHPLLRLGLKRRGLCTGVVQVTRRSCCSATVASTPSDGDLTAGDNATSLVSSSEPPKYQRWDEPDYRKWKNQEEEILGDIEPIIFLTKEILH
Subjt:  MAASFLFRGHPLLRLGLKRRGLCTGVVQVTRRSCCSATVASTPSDGDLTAGDNATSLVSSSEPPKYQRWDEPDYRKWKNQEEEILGDIEPIIFLTKEILH

Query:  SHSRALGQAYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKR
        SH       YADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKR
Subjt:  SHSRALGQAYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKR

Query:  GS
        GS
Subjt:  GS

XP_022135338.1 protein DCL, chloroplastic isoform X1 [Momordica charantia]1.4e-9181.68Show/hide
Query:  MAASFLFRGHPLLRLGLKRRGLCTGVVQVTRRSCCSATVASTPSDGDLTAGDNATSLVSSSEPPKYQRWDEPDYRKWKNQEEEILGDIEPIIFLTKEILH
        MAAS L RGHPLLRLGL+ RGLCTG+VQVTRRSCC+AT A TP DG+LT+ +N TS++SSS+PPKY RWDEPDYRKWK+QEEE+L DIEPII LTKEILH
Subjt:  MAASFLFRGHPLLRLGLKRRGLCTGVVQVTRRSCCSATVASTPSDGDLTAGDNATSLVSSSEPPKYQRWDEPDYRKWKNQEEEILGDIEPIIFLTKEILH

Query:  SHSRALGQAYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKR
        S+       Y DGERLT  DER VV+RLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRC FVIRTDGGWIDFSYQKCLRAYIRNKYPS+AERFIREHFKR
Subjt:  SHSRALGQAYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKR

Query:  GS
        GS
Subjt:  GS

TrEMBL top hitse value%identityAlignment
A0A0A0L0D6 Uncharacterized protein1.4e-10292.08Show/hide
Query:  MAASFLFRGHPLLRLGLKRRGLCTGVVQVTRRSCCSATVASTPSDGDLTAGDNATSLVSSSEPPKYQRWDEPDYRKWKNQEEEILGDIEPIIFLTKEILH
        MAASFLFRGHPLLRLGLKRRG CTG+VQVT R CCSAT ASTPSDGDLTAGDNATS+VS SEPPKY RWDEPDYRKWKNQEEEILGDIEPIIFLTKEILH
Subjt:  MAASFLFRGHPLLRLGLKRRGLCTGVVQVTRRSCCSATVASTPSDGDLTAGDNATSLVSSSEPPKYQRWDEPDYRKWKNQEEEILGDIEPIIFLTKEILH

Query:  SHSRALGQAYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKR
        SH       YADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFR SRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKR
Subjt:  SHSRALGQAYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKR

Query:  GS
        GS
Subjt:  GS

A0A1S3BU88 protein DCL, chloroplastic3.0e-10896.53Show/hide
Query:  MAASFLFRGHPLLRLGLKRRGLCTGVVQVTRRSCCSATVASTPSDGDLTAGDNATSLVSSSEPPKYQRWDEPDYRKWKNQEEEILGDIEPIIFLTKEILH
        MAASFLFRGHPLLRLGLKRRGLCTGVVQVTRRSCCSATVASTPSDGDLTAGDNATSLVSSSEPPKYQRWDEPDYRKWKNQEEEILGDIEPIIFLTKEILH
Subjt:  MAASFLFRGHPLLRLGLKRRGLCTGVVQVTRRSCCSATVASTPSDGDLTAGDNATSLVSSSEPPKYQRWDEPDYRKWKNQEEEILGDIEPIIFLTKEILH

Query:  SHSRALGQAYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKR
        SH       YADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKR
Subjt:  SHSRALGQAYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKR

Query:  GS
        GS
Subjt:  GS

A0A6J1C4J4 protein DCL, chloroplastic isoform X16.7e-9281.68Show/hide
Query:  MAASFLFRGHPLLRLGLKRRGLCTGVVQVTRRSCCSATVASTPSDGDLTAGDNATSLVSSSEPPKYQRWDEPDYRKWKNQEEEILGDIEPIIFLTKEILH
        MAAS L RGHPLLRLGL+ RGLCTG+VQVTRRSCC+AT A TP DG+LT+ +N TS++SSS+PPKY RWDEPDYRKWK+QEEE+L DIEPII LTKEILH
Subjt:  MAASFLFRGHPLLRLGLKRRGLCTGVVQVTRRSCCSATVASTPSDGDLTAGDNATSLVSSSEPPKYQRWDEPDYRKWKNQEEEILGDIEPIIFLTKEILH

Query:  SHSRALGQAYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKR
        S+       Y DGERLT  DER VV+RLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRC FVIRTDGGWIDFSYQKCLRAYIRNKYPS+AERFIREHFKR
Subjt:  SHSRALGQAYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKR

Query:  GS
        GS
Subjt:  GS

A0A6J1FNQ4 protein DCL homolog, chloroplastic-like1.2e-8878.22Show/hide
Query:  MAASFLFRGHPLLRLGLKRRGLCTGVVQVTRRSCCSATVASTPSDGDLTAGDNATSLVSSSEPPKYQRWDEPDYRKWKNQEEEILGDIEPIIFLTKEILH
        M AS L RGHPL+RLGL+ RGLC G+VQVTRRSCC+A  ASTP  G L++ +N TS++S+++PPKYQRW+EP YRKWKNQEEEIL DI+PII LTKEILH
Subjt:  MAASFLFRGHPLLRLGLKRRGLCTGVVQVTRRSCCSATVASTPSDGDLTAGDNATSLVSSSEPPKYQRWDEPDYRKWKNQEEEILGDIEPIIFLTKEILH

Query:  SHSRALGQAYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKR
        S+       Y DGERLT EDE+ VVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRC FVIRTDGGWIDFSYQKCLRAYIRNKYP +AERFIREHFKR
Subjt:  SHSRALGQAYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKR

Query:  GS
        GS
Subjt:  GS

A0A6J1J4G4 protein DCL homolog, chloroplastic-like isoform X15.3e-8978.22Show/hide
Query:  MAASFLFRGHPLLRLGLKRRGLCTGVVQVTRRSCCSATVASTPSDGDLTAGDNATSLVSSSEPPKYQRWDEPDYRKWKNQEEEILGDIEPIIFLTKEILH
        M AS L RGHPL+RLGL+ RGLCTG++QVTRRSCC+A  ASTP  G L++ +N TS++S+++PPKYQRWDEP YRKWKNQEEEIL DI+PII LTKEILH
Subjt:  MAASFLFRGHPLLRLGLKRRGLCTGVVQVTRRSCCSATVASTPSDGDLTAGDNATSLVSSSEPPKYQRWDEPDYRKWKNQEEEILGDIEPIIFLTKEILH

Query:  SHSRALGQAYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKR
        S+       Y DGERLT EDE+ VVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRC FVIRTDGGWIDFSYQKCLRAYIRNKYP +A+RFIREHFKR
Subjt:  SHSRALGQAYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKR

Query:  GS
        GS
Subjt:  GS

SwissProt top hitse value%identityAlignment
Q42463 Protein DCL, chloroplastic1.4e-2535.52Show/hide
Query:  CSATVASTPSDGDLTAGDNA---------TSLVSSSEPPKYQRWDEPDY--------RKWKNQEEEILGDIEPIIFLTKEILHSHSRALGQAYADGERLT
        C      T S+G     DNA         T L ++SE  +  + +  D           W + E++IL D  P++   + ILHS        YA G+RL+
Subjt:  CSATVASTPSDGDLTAGDNA---------TSLVSSSEPPKYQRWDEPDY--------RKWKNQEEEILGDIEPIIFLTKEILHSHSRALGQAYADGERLT

Query:  LEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKR
         + +RT++ RLL +HP  + KIG G++ I V  HP F +SRC F++R DG  +DFSY KC++  IR  YP +A+ FI  HF++
Subjt:  LEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKR

Q5D869 DNA-directed RNA polymerase V subunit 12.9e-2340.98Show/hide
Query:  NQEEEILGDIEPIIFLTKEILHSHSRALGQAYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCL
        ++E+E+L D+EP++   ++I+H        AY DG+ ++ +D+  V++++L  HP  E K+G G++ I VD+H  F  SRCFFV+ TDG   DFSY+K L
Subjt:  NQEEEILGDIEPIIFLTKEILHSHSRALGQAYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCL

Query:  RAYIRNKYPSFAERFIREHFKR
          Y+  KYP  AE FI ++F +
Subjt:  RAYIRNKYPSFAERFIREHFKR

Q8L557 Protein EMBRYO DEFECTIVE 5144.1e-0629.25Show/hide
Query:  RKWKNQEEEILGDIE--PIIFLTKEILHSHSRALGQAYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDF
        +K K  EEE  G ++  P  F+T   +  +       +     +   +   ++D +   H   E KIG G+++  V  HP ++ SRCFF++R D    DF
Subjt:  RKWKNQEEEILGDIE--PIIFLTKEILHSHSRALGQAYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDF

Query:  SYQKCL
        S++KC+
Subjt:  SYQKCL

Q9C642 Protein DCL homolog, chloroplastic4.7e-2635.63Show/hide
Query:  VQVTRRSCCSATVASTPSDGDLTAGDNATSLVSSSEPPKYQRWDEPDYRKWKNQEEEILGDIEPIIFLTKEILHSHSRALGQAYADGERLTLEDERTVVD
        V+  R     A + ++ S G         +   SSE  + +  +  +  ++ + E++IL    P++   + ILHS        YA+ +RL+ E ERT+++
Subjt:  VQVTRRSCCSATVASTPSDGDLTAGDNATSLVSSSEPPKYQRWDEPDYRKWKNQEEEILGDIEPIIFLTKEILHSHSRALGQAYADGERLTLEDERTVVD

Query:  RLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKR
         LL +HP  E KIGCG++ IMV  HP F  SRC F++R DG  +DFSY KC++  I+ KYP +A+ FI  HF++
Subjt:  RLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKR

Q9LQ02 DNA-directed RNA polymerase IV subunit 13.2e-0632.54Show/hide
Query:  WKNQEEEILGDIEPIIFLTKEILHSHSRALGQAYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQK
        WKN        IE +    K ILHS        Y   E L   DE  +V  +L  HP++ +KIG G++ I V +  +   S CF V+R DG + DFSY K
Subjt:  WKNQEEEILGDIEPIIFLTKEILHSHSRALGQAYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQK

Query:  CLRAYIRNKYPSFAERFIREHFKRGS
        C+    +   P     +  ++ K G+
Subjt:  CLRAYIRNKYPSFAERFIREHFKRGS

Arabidopsis top hitse value%identityAlignment
AT1G45230.1 Protein of unknown function (DUF3223)3.3e-2735.63Show/hide
Query:  VQVTRRSCCSATVASTPSDGDLTAGDNATSLVSSSEPPKYQRWDEPDYRKWKNQEEEILGDIEPIIFLTKEILHSHSRALGQAYADGERLTLEDERTVVD
        V+  R     A + ++ S G         +   SSE  + +  +  +  ++ + E++IL    P++   + ILHS        YA+ +RL+ E ERT+++
Subjt:  VQVTRRSCCSATVASTPSDGDLTAGDNATSLVSSSEPPKYQRWDEPDYRKWKNQEEEILGDIEPIIFLTKEILHSHSRALGQAYADGERLTLEDERTVVD

Query:  RLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKR
         LL +HP  E KIGCG++ IMV  HP F  SRC F++R DG  +DFSY KC++  I+ KYP +A+ FI  HF++
Subjt:  RLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKR

AT1G45230.2 Protein of unknown function (DUF3223)7.4e-2735.63Show/hide
Query:  VQVTRRSCCSATVASTPSDGDLTAGDNATSLVSSSEPPKYQRWDEPDYRKWKNQEEEILGDIEPIIFLTKEILHSHSRALGQAYADGERLTLEDERTVVD
        V+  R     A + ++ S G         +   SSE  + +  +  +  ++ + E++IL    P++   + ILHS        YA+ +RL+ E ERT+++
Subjt:  VQVTRRSCCSATVASTPSDGDLTAGDNATSLVSSSEPPKYQRWDEPDYRKWKNQEEEILGDIEPIIFLTKEILHSHSRALGQAYADGERLTLEDERTVVD

Query:  RLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKR
         LL +HP  E KIGCG++ IMV  HP F  SRC F++R DG  +DFSY KC++  I+ KYP +A+ FI  HF++
Subjt:  RLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKR

AT1G63020.1 nuclear RNA polymerase D1A2.3e-0732.54Show/hide
Query:  WKNQEEEILGDIEPIIFLTKEILHSHSRALGQAYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQK
        WKN        IE +    K ILHS        Y   E L   DE  +V  +L  HP++ +KIG G++ I V +  +   S CF V+R DG + DFSY K
Subjt:  WKNQEEEILGDIEPIIFLTKEILHSHSRALGQAYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQK

Query:  CLRAYIRNKYPSFAERFIREHFKRGS
        C+    +   P     +  ++ K G+
Subjt:  CLRAYIRNKYPSFAERFIREHFKRGS

AT2G40030.1 nuclear RNA polymerase D1B2.0e-2440.98Show/hide
Query:  NQEEEILGDIEPIIFLTKEILHSHSRALGQAYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCL
        ++E+E+L D+EP++   ++I+H        AY DG+ ++ +D+  V++++L  HP  E K+G G++ I VD+H  F  SRCFFV+ TDG   DFSY+K L
Subjt:  NQEEEILGDIEPIIFLTKEILHSHSRALGQAYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCL

Query:  RAYIRNKYPSFAERFIREHFKR
          Y+  KYP  AE FI ++F +
Subjt:  RAYIRNKYPSFAERFIREHFKR

AT3G46630.1 Protein of unknown function (DUF3223)2.0e-5655.09Show/hide
Query:  MAASFLFRGHPLLRLG-LKRRG----LCTGVVQVTRRSCCSA---------TVASTPSDGDLTAGDNATSLVSSSEPPKYQRWDEPDYRKWKNQEEEILG
        M +  L R  PLLR G L  R     +  G++   RR  CS            + +P +G   A  N TS V  +      R+++PDYRKWKN E EIL 
Subjt:  MAASFLFRGHPLLRLG-LKRRG----LCTGVVQVTRRSCCSA---------TVASTPSDGDLTAGDNATSLVSSSEPPKYQRWDEPDYRKWKNQEEEILG

Query:  DIEPIIFLTKEILHSHSRALGQAYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKY
        DIEPI  L KEILHS        Y DGERL  EDE+ V+++LL +HP+++DKIGCGL+ IMVDRHPQFRHSRC FV+RTDGGWIDFSYQKCLRAY+R+KY
Subjt:  DIEPIIFLTKEILHSHSRALGQAYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKY

Query:  PSFAERFIREHFKRGS
        PS AERFIREHFKR S
Subjt:  PSFAERFIREHFKRGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCTTCTTTTCTTTTCAGAGGTCATCCGCTCCTGCGGTTAGGGCTTAAGCGCCGCGGGCTGTGTACTGGGGTTGTGCAAGTGACTCGCCGGTCTTGCTGC
AGTGCGACGGTGGCGTCTACTCCATCGGACGGCGACTTAACAGCTGGTGATAATGCTACCTCATTGGTGAGTTCCAGTGAGCCACCAAAGTACCAAAGATGGGAC
GAGCCTGATTATCGAAAGTGGAAGAATCAGGAGGAGGAAATTCTTGGCGATATCGAGCCTATCATATTCCTCACTAAAGAAATCCTCCACTCCCATAGTAGGGCC
CTTGGGCAAGCGTATGCGGATGGGGAGCGATTGACATTGGAGGATGAGAGAACTGTGGTAGACAGACTTCTGGCACATCATCCACATGCGGAAGATAAAATTGGA
TGTGGACTTGAATCCATCATGGTCGATCGGCACCCCCAATTTCGGCACTCAAGATGCTTCTTTGTTATAAGGACCGATGGTGGATGGATTGACTTCTCATATCAA
AAGTGTCTTCGGGCATATATCCGAAACAAATACCCATCGTTTGCAGAGCGGTTTATTCGCGAGCATTTCAAACGTGGTAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATTATTTCCTTTTCCTTCTTTTTTTATTTTTTTAAATAATACAATTAAATCTGTGTCTTAAAAAGAAAAAGAACAAAGTAAAAAAGATAAAGATTGAGTATTAAA
GTAATAACTTTCCAATTCAATTTCACCTTCATCATCAATACCATCCATCGAAACTTGTTAATAGTTTGTAAATATTTTCATTTGGTACATAATTTTGTTTAATAT
TTACTGCCACCTGTCAATTCGTTGGGCCACTTGAGAAGAGGAATTGCTGATATAGACCCATCCAGCCCAGGAACGGCCCATAAAGCCCAATAACCCGAGACGAAG
GCACCTTCGTCTGGTCACTTCATGCTGAGCTCGGAGCTGCTCTCCACATGAACGTTTGTGATCCTCATGGCTGCTTCTTTTCTTTTCAGAGGTCATCCGCTCCTG
CGGTTAGGGCTTAAGCGCCGCGGGCTGTGTACTGGGGTTGTGCAAGTGACTCGCCGGTCTTGCTGCAGTGCGACGGTGGCGTCTACTCCATCGGACGGCGACTTA
ACAGCTGGTGATAATGCTACCTCATTGGTGAGTTCCAGTGAGCCACCAAAGTACCAAAGATGGGACGAGCCTGATTATCGAAAGTGGAAGAATCAGGAGGAGGAA
ATTCTTGGCGATATCGAGCCTATCATATTCCTCACTAAAGAAATCCTCCACTCCCATAGTAGGGCCCTTGGGCAAGCGTATGCGGATGGGGAGCGATTGACATTG
GAGGATGAGAGAACTGTGGTAGACAGACTTCTGGCACATCATCCACATGCGGAAGATAAAATTGGATGTGGACTTGAATCCATCATGGTCGATCGGCACCCCCAA
TTTCGGCACTCAAGATGCTTCTTTGTTATAAGGACCGATGGTGGATGGATTGACTTCTCATATCAAAAGTGTCTTCGGGCATATATCCGAAACAAATACCCATCG
TTTGCAGAGCGGTTTATTCGCGAGCATTTCAAACGTGGTAGTTGATGAATTTATGCTACCGTTGACGCTGAGCTATGGTTTAACTGAATTTGTTTTAATCGAGAG
AGATGTATGAATGATAAGGGTATGTTTGGCTTGCACTTGTATTTACAAATTTATTGAGTTCAGTAAATATGGTACGCAACCCGAATTTTGATTTTTTAAAACTGT
TTTTGAATTTTGTGATTGCTTATATTTTGAAAACATTTTTTATGTTTTATTTGTATTCTGAATCTAAATTTTAAAATGCAAAAT
Protein sequenceShow/hide protein sequence
MAASFLFRGHPLLRLGLKRRGLCTGVVQVTRRSCCSATVASTPSDGDLTAGDNATSLVSSSEPPKYQRWDEPDYRKWKNQEEEILGDIEPIIFLTKEILHSHSRA
LGQAYADGERLTLEDERTVVDRLLAHHPHAEDKIGCGLESIMVDRHPQFRHSRCFFVIRTDGGWIDFSYQKCLRAYIRNKYPSFAERFIREHFKRGS