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MELO3C016848 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C016848
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionHomeobox-leucine zipper protein HAT22-like
Genome locationchr07:1612315..1612712
RNA-Seq ExpressionMELO3C016848
SyntenyMELO3C016848
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064478.1 homeobox-leucine zipper protein HAT22-like [Cucumis melo var. makuwa]1.0e-63100Show/hide
Query:  MDSDCNTGLLLGLGSVSGDDINDSVRSGVAGVNKKKLQVLKFDDDILPSLTLGLSFVVETATEEGCSGSPVSSFSNSSGFKRERAAGEDVAETEECMKVG
        MDSDCNTGLLLGLGSVSGDDINDSVRSGVAGVNKKKLQVLKFDDDILPSLTLGLSFVVETATEEGCSGSPVSSFSNSSGFKRERAAGEDVAETEECMKVG
Subjt:  MDSDCNTGLLLGLGSVSGDDINDSVRSGVAGVNKKKLQVLKFDDDILPSLTLGLSFVVETATEEGCSGSPVSSFSNSSGFKRERAAGEDVAETEECMKVG

Query:  EEDEDGSPRKKLRLTKQQSAILEDNFKEHSSL
        EEDEDGSPRKKLRLTKQQSAILEDNFKEHSSL
Subjt:  EEDEDGSPRKKLRLTKQQSAILEDNFKEHSSL

KAE8649900.1 hypothetical protein Csa_011929 [Cucumis sativus]4.1e-5287.22Show/hide
Query:  MDSDCNTGLLLGLGSVSGDDINDSVRSGVAGVNKKKL-QVLKFDDDILPSLTLGLSFVVETATEEGCSGSPVSSFSNSSGFKRERAAGEDVAETEECMKV
        MD+DCNTGLLLGLG VSG +IN SVRS +  +NKKKL QVLKFDDDILPSLTLGLSFVV+TATE+GCSGSPVSSFSNSSGFKRER AGE+VAETEECMKV
Subjt:  MDSDCNTGLLLGLGSVSGDDINDSVRSGVAGVNKKKL-QVLKFDDDILPSLTLGLSFVVETATEEGCSGSPVSSFSNSSGFKRERAAGEDVAETEECMKV

Query:  GEEDEDGSPRKKLRLTKQQSAILEDNFKEHSSL
        GEEDE+GSPRKKLRLTK QSAILEDNFKEHSSL
Subjt:  GEEDEDGSPRKKLRLTKQQSAILEDNFKEHSSL

XP_004141416.1 homeobox-leucine zipper protein HAT9 [Cucumis sativus]4.1e-5287.22Show/hide
Query:  MDSDCNTGLLLGLGSVSGDDINDSVRSGVAGVNKKKL-QVLKFDDDILPSLTLGLSFVVETATEEGCSGSPVSSFSNSSGFKRERAAGEDVAETEECMKV
        MD+DCNTGLLLGLG VSG +IN SVRS +  +NKKKL QVLKFDDDILPSLTLGLSFVV+TATE+GCSGSPVSSFSNSSGFKRER AGE+VAETEECMKV
Subjt:  MDSDCNTGLLLGLGSVSGDDINDSVRSGVAGVNKKKL-QVLKFDDDILPSLTLGLSFVVETATEEGCSGSPVSSFSNSSGFKRERAAGEDVAETEECMKV

Query:  GEEDEDGSPRKKLRLTKQQSAILEDNFKEHSSL
        GEEDE+GSPRKKLRLTK QSAILEDNFKEHSSL
Subjt:  GEEDEDGSPRKKLRLTKQQSAILEDNFKEHSSL

XP_023536403.1 homeobox-leucine zipper protein HAT9-like [Cucurbita pepo subsp. pepo]6.6e-3468.18Show/hide
Query:  MDSDCNTGLLLGLGSVSGDDINDSVR---SGVAGVNKKKLQVLKFDDDILPSLTLGLSFVVE--------TATEE----GCSGSPVSSFSNSSGFKRER-
        MD+DCNTGLLLGLG   G D ++S+R     VAGV KKKLQVLKF DDILPSLTLGLS VV+        TA +E    G SGSPVSSFSNSSGFKRER 
Subjt:  MDSDCNTGLLLGLGSVSGDDINDSVR---SGVAGVNKKKLQVLKFDDDILPSLTLGLSFVVE--------TATEE----GCSGSPVSSFSNSSGFKRER-

Query:  -AAGEDVAETEE-----CMKVGEEDEDGSPRKKLRLTKQQSAILEDNFKEHSSL
          AGE+ AETE       MKV EE+EDGSPRKKLRLTK+QSA+LEDNFKEHSSL
Subjt:  -AAGEDVAETEE-----CMKVGEEDEDGSPRKKLRLTKQQSAILEDNFKEHSSL

XP_038898886.1 homeobox-leucine zipper protein HAT22-like [Benincasa hispida]3.0e-3974Show/hide
Query:  MDSDCNTGLLLGLGSVSGDD-INDSVRSGVAGVNKKKLQVLKFDDDILPSLTLGLSFVVE----TATEE----GCSGSPVSSFSNSSGFKRER----AAG
        M+ DCNTGLLLGLG VS DD +   V   VAGV KKKLQVLKF DDILPSLTLGLS VVE     ATEE    GCSGSPVSSFSNSSGFKRER      G
Subjt:  MDSDCNTGLLLGLGSVSGDD-INDSVRSGVAGVNKKKLQVLKFDDDILPSLTLGLSFVVE----TATEE----GCSGSPVSSFSNSSGFKRER----AAG

Query:  EDVAETEE-----CMKVGEEDEDGSPRKKLRLTKQQSAILEDNFKEHSSL
         + AE EE     CMKVGEEDEDGSPRKKLRLTKQQSAILEDNFKEHSSL
Subjt:  EDVAETEE-----CMKVGEEDEDGSPRKKLRLTKQQSAILEDNFKEHSSL

TrEMBL top hitse value%identityAlignment
A0A0A0L3X3 Homeobox domain-containing protein2.0e-5287.22Show/hide
Query:  MDSDCNTGLLLGLGSVSGDDINDSVRSGVAGVNKKKL-QVLKFDDDILPSLTLGLSFVVETATEEGCSGSPVSSFSNSSGFKRERAAGEDVAETEECMKV
        MD+DCNTGLLLGLG VSG +IN SVRS +  +NKKKL QVLKFDDDILPSLTLGLSFVV+TATE+GCSGSPVSSFSNSSGFKRER AGE+VAETEECMKV
Subjt:  MDSDCNTGLLLGLGSVSGDDINDSVRSGVAGVNKKKL-QVLKFDDDILPSLTLGLSFVVETATEEGCSGSPVSSFSNSSGFKRERAAGEDVAETEECMKV

Query:  GEEDEDGSPRKKLRLTKQQSAILEDNFKEHSSL
        GEEDE+GSPRKKLRLTK QSAILEDNFKEHSSL
Subjt:  GEEDEDGSPRKKLRLTKQQSAILEDNFKEHSSL

A0A5A7VA64 Homeobox-leucine zipper protein HAT22-like5.0e-64100Show/hide
Query:  MDSDCNTGLLLGLGSVSGDDINDSVRSGVAGVNKKKLQVLKFDDDILPSLTLGLSFVVETATEEGCSGSPVSSFSNSSGFKRERAAGEDVAETEECMKVG
        MDSDCNTGLLLGLGSVSGDDINDSVRSGVAGVNKKKLQVLKFDDDILPSLTLGLSFVVETATEEGCSGSPVSSFSNSSGFKRERAAGEDVAETEECMKVG
Subjt:  MDSDCNTGLLLGLGSVSGDDINDSVRSGVAGVNKKKLQVLKFDDDILPSLTLGLSFVVETATEEGCSGSPVSSFSNSSGFKRERAAGEDVAETEECMKVG

Query:  EEDEDGSPRKKLRLTKQQSAILEDNFKEHSSL
        EEDEDGSPRKKLRLTKQQSAILEDNFKEHSSL
Subjt:  EEDEDGSPRKKLRLTKQQSAILEDNFKEHSSL

A0A6J1F6L5 homeobox-leucine zipper protein HAT9-like4.6e-3366.88Show/hide
Query:  MDSDCNTGLLLGLGSVSGDDINDSVR---SGVAGVNKKKLQVLKFDDDILPSLTLGLSFVVE--------TATEE----GCSGSPVSSFSNSSGFKRER-
        MD+DCNTGLLLGLG   G D ++S+R     VAGV KKKLQVLKF DDILPSLTLGLS VV+        TA +E    G SGSPVSSFS+SSGFKRER 
Subjt:  MDSDCNTGLLLGLGSVSGDDINDSVR---SGVAGVNKKKLQVLKFDDDILPSLTLGLSFVVE--------TATEE----GCSGSPVSSFSNSSGFKRER-

Query:  -AAGEDVAETEE-----CMKVGEEDEDGSPRKKLRLTKQQSAILEDNFKEHSSL
          AGE+ AE E       MKV EE+EDGSPRKKLRLTK+QSA+LEDNFKEHSSL
Subjt:  -AAGEDVAETEE-----CMKVGEEDEDGSPRKKLRLTKQQSAILEDNFKEHSSL

A0A6J1IHG6 homeobox-leucine zipper protein HAT9-like7.8e-3366.23Show/hide
Query:  MDSDCNTGLLLGLGSVSGDDINDSVR---SGVAGVNKKKLQVLKFDDDILPSLTLGLSFVVETA---------TEEGCSGSPVSSFSNSSGFKRER--AA
        MD+DCN GLLLGLG   G D ++S+R     VAGV KKKLQVLKF DDILPSLTLGLS VVE +           +G SGSP SSFSNSSGFKRER   A
Subjt:  MDSDCNTGLLLGLGSVSGDDINDSVR---SGVAGVNKKKLQVLKFDDDILPSLTLGLSFVVETA---------TEEGCSGSPVSSFSNSSGFKRER--AA

Query:  GEDVAETEE-----CMKVGEEDEDGSPRKKLRLTKQQSAILEDNFKEHSSL
        GE+ AE E       MKV EE+EDGSPRKKLRLTK+QSA+LEDNFKEHSSL
Subjt:  GEDVAETEE-----CMKVGEEDEDGSPRKKLRLTKQQSAILEDNFKEHSSL

A0A6J1IWK3 homeobox-leucine zipper protein HAT9-like isoform X18.1e-2266.04Show/hide
Query:  VAGVNKKKLQVLKFDDDILPSLTLGLSFVVETATE---EGCSGSPVSSFSNSSGFKRERAAGEDVAETEECMKVGEEDEDGSPRKKLRLTKQQSAILEDN
        +AGV KKK QVLKFDD I+PSL+LGLS VVE+  E      SGSPVSSFSNSSG+KRER    D    EE     EEDEDGSPRKKLR TK+QSA LE++
Subjt:  VAGVNKKKLQVLKFDDDILPSLTLGLSFVVETATE---EGCSGSPVSSFSNSSGFKRERAAGEDVAETEECMKVGEEDEDGSPRKKLRLTKQQSAILEDN

Query:  FKEHSS
        FKEHS+
Subjt:  FKEHSS

SwissProt top hitse value%identityAlignment
A2XE76 Homeobox-leucine zipper protein HOX192.9e-0843.43Show/hide
Query:  PSLTLGL-------SFVVETATEEGCSGSPVSSFSN-------SSGFKRERAAGEDVAETEECMKVGEEDEDGSPRKKLRLTKQQSAILEDNFKEHSSL
        PSLTL L       +    TAT  G  G P  S S+       ++  KRERA   D           ++D+DGS RKKLRLTK+QSA+LED F+EHS+L
Subjt:  PSLTLGL-------SFVVETATEEGCSGSPVSSFSN-------SSGFKRERAAGEDVAETEECMKVGEEDEDGSPRKKLRLTKQQSAILEDNFKEHSSL

P46603 Homeobox-leucine zipper protein HAT93.0e-1344.83Show/hide
Query:  DSDCNTGLLLGLG-SVSGDDINDSVRSGVAGVNKKKLQVLKFDDDILPSLTLGL----SFVVETATEEGC----SGSPVSSFSNSSGFKRERAAGEDVAE
        D  CNTGL+LGLG S   ++ N ++R            V K +    PSLTL L    S  V T  ++ C    S S VSSFS+    KRER  GE+  E
Subjt:  DSDCNTGLLLGLG-SVSGDDINDSVRSGVAGVNKKKLQVLKFDDDILPSLTLGL----SFVVETATEEGC----SGSPVSSFSNSSGFKRERAAGEDVAE

Query:  ----TEECMKVGEEDEDG-SPRKKLRLTKQQSAILEDNFKEHSSL
            TE  +    EDE+G S RKKLRLTKQQSA+LE++FK+HS+L
Subjt:  ----TEECMKVGEEDEDG-SPRKKLRLTKQQSAILEDNFKEHSSL

P46604 Homeobox-leucine zipper protein HAT221.9e-1241.56Show/hide
Query:  MDSDCNTGLLLGLG-SVSGDDINDSVRSGVAGVNKKKLQVLKFDDDILPSLTLGL---SFVVETATEEG-------CSGSPVSSFSNSSGFKRER--AAG
        +D  CNTGL+LGLG S + ++ N +++   + V+ + ++       + PSLTL L   S+ ++T    G        S S +SSFS S   KRER  + G
Subjt:  MDSDCNTGLLLGLG-SVSGDDINDSVRSGVAGVNKKKLQVLKFDDDILPSLTLGL---SFVVETATEEG-------CSGSPVSSFSNSSGFKRER--AAG

Query:  EDVAETEE------CMKVGE--EDEDG-SPRKKLRLTKQQSAILEDNFKEHSSL
        +   E EE      C +V +  +DE+G S RKKLRLTKQQSA+LEDNFK HS+L
Subjt:  EDVAETEE------CMKVGE--EDEDG-SPRKKLRLTKQQSAILEDNFKEHSSL

P92953 Homeobox-leucine zipper protein ATHB-42.3e-0542.05Show/hide
Query:  VVETATEEGCSGSPVSSFSNSSGFKRE----RAAGEDVAETEECMK----VGEEDEDG----SPRKKLRLTKQQSAILEDNFKEHSSL
        VV+   E     SP S+ S+ SG KR+    R   E+ AE   C +     G +DEDG      RKKLRL+K Q+ +LE+ FKEHS+L
Subjt:  VVETATEEGCSGSPVSSFSNSSGFKRE----RAAGEDVAETEECMK----VGEEDEDG----SPRKKLRLTKQQSAILEDNFKEHSSL

Q8GRL4 Homeobox-leucine zipper protein HOX192.9e-0843.43Show/hide
Query:  PSLTLGL-------SFVVETATEEGCSGSPVSSFSN-------SSGFKRERAAGEDVAETEECMKVGEEDEDGSPRKKLRLTKQQSAILEDNFKEHSSL
        PSLTL L       +    TAT  G  G P  S S+       ++  KRERA   D           ++D+DGS RKKLRLTK+QSA+LED F+EHS+L
Subjt:  PSLTLGL-------SFVVETATEEGCSGSPVSSFSN-------SSGFKRERAAGEDVAETEECMKVGEEDEDGSPRKKLRLTKQQSAILEDNFKEHSSL

Arabidopsis top hitse value%identityAlignment
AT2G22800.1 Homeobox-leucine zipper protein family2.1e-1444.83Show/hide
Query:  DSDCNTGLLLGLG-SVSGDDINDSVRSGVAGVNKKKLQVLKFDDDILPSLTLGL----SFVVETATEEGC----SGSPVSSFSNSSGFKRERAAGEDVAE
        D  CNTGL+LGLG S   ++ N ++R            V K +    PSLTL L    S  V T  ++ C    S S VSSFS+    KRER  GE+  E
Subjt:  DSDCNTGLLLGLG-SVSGDDINDSVRSGVAGVNKKKLQVLKFDDDILPSLTLGL----SFVVETATEEGC----SGSPVSSFSNSSGFKRERAAGEDVAE

Query:  ----TEECMKVGEEDEDG-SPRKKLRLTKQQSAILEDNFKEHSSL
            TE  +    EDE+G S RKKLRLTKQQSA+LE++FK+HS+L
Subjt:  ----TEECMKVGEEDEDG-SPRKKLRLTKQQSAILEDNFKEHSSL

AT2G44910.1 homeobox-leucine zipper protein 41.6e-0642.05Show/hide
Query:  VVETATEEGCSGSPVSSFSNSSGFKRE----RAAGEDVAETEECMK----VGEEDEDG----SPRKKLRLTKQQSAILEDNFKEHSSL
        VV+   E     SP S+ S+ SG KR+    R   E+ AE   C +     G +DEDG      RKKLRL+K Q+ +LE+ FKEHS+L
Subjt:  VVETATEEGCSGSPVSSFSNSSGFKRE----RAAGEDVAETEECMK----VGEEDEDG----SPRKKLRLTKQQSAILEDNFKEHSSL

AT4G16780.1 homeobox protein 26.2e-0639.19Show/hide
Query:  ETATEEGCSGSPVSSFSNSSGFKRERAAGEDVAETEECMKVGEEDEDGSPRKKLRLTKQQSAILEDNFKEHSSL
        E   E+    SP S+ S+S+G + ER   E+  + +    + ++++  + RKKLRL+K QSAILE+ FK+HS+L
Subjt:  ETATEEGCSGSPVSSFSNSSGFKRERAAGEDVAETEECMKVGEEDEDGSPRKKLRLTKQQSAILEDNFKEHSSL

AT4G37790.1 Homeobox-leucine zipper protein family1.4e-1341.56Show/hide
Query:  MDSDCNTGLLLGLG-SVSGDDINDSVRSGVAGVNKKKLQVLKFDDDILPSLTLGL---SFVVETATEEG-------CSGSPVSSFSNSSGFKRER--AAG
        +D  CNTGL+LGLG S + ++ N +++   + V+ + ++       + PSLTL L   S+ ++T    G        S S +SSFS S   KRER  + G
Subjt:  MDSDCNTGLLLGLG-SVSGDDINDSVRSGVAGVNKKKLQVLKFDDDILPSLTLGL---SFVVETATEEG-------CSGSPVSSFSNSSGFKRER--AAG

Query:  EDVAETEE------CMKVGE--EDEDG-SPRKKLRLTKQQSAILEDNFKEHSSL
        +   E EE      C +V +  +DE+G S RKKLRLTKQQSA+LEDNFK HS+L
Subjt:  EDVAETEE------CMKVGE--EDEDG-SPRKKLRLTKQQSAILEDNFKEHSSL

AT5G06710.1 homeobox from Arabidopsis thaliana1.8e-0540.59Show/hide
Query:  LTLGLSFVVETATEE-----GCSGSP----VSSFSNSSGFK----RERAAGEDVAETEE-----CMKVGEEDEDGSPRKKLRLTKQQSAILEDNFKEHSS
        + LG + VVE   EE       S SP     SSF    G K      R+   D+ +  E           +DE+GS RKKLRL+K QSA LED+FKEHS+
Subjt:  LTLGLSFVVETATEE-----GCSGSP----VSSFSNSSGFK----RERAAGEDVAETEE-----CMKVGEEDEDGSPRKKLRLTKQQSAILEDNFKEHSS

Query:  L
        L
Subjt:  L


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCAGATTGCAACACGGGGCTTCTTCTTGGCCTAGGGAGCGTTTCCGGAGACGATATTAATGATTCTGTGCGGTCCGGTGTAGCCGGTGTTAATAAGAAGAAGCT
GCAGGTTTTGAAGTTCGATGATGATATTTTGCCTTCTTTGACGCTTGGATTGTCGTTTGTTGTCGAGACTGCGACGGAGGAGGGATGTTCGGGTAGTCCGGTTTCGTCGT
TTTCCAACTCGTCGGGGTTTAAGAGGGAACGCGCTGCTGGCGAGGATGTGGCGGAGACGGAGGAGTGTATGAAAGTGGGTGAGGAAGATGAAGATGGAAGTCCGAGGAAG
AAACTTAGATTAACAAAACAACAATCCGCCATTTTAGAGGACAATTTCAAAGAACACTCGAGTCTT
mRNA sequenceShow/hide mRNA sequence
ATGGATTCAGATTGCAACACGGGGCTTCTTCTTGGCCTAGGGAGCGTTTCCGGAGACGATATTAATGATTCTGTGCGGTCCGGTGTAGCCGGTGTTAATAAGAAGAAGCT
GCAGGTTTTGAAGTTCGATGATGATATTTTGCCTTCTTTGACGCTTGGATTGTCGTTTGTTGTCGAGACTGCGACGGAGGAGGGATGTTCGGGTAGTCCGGTTTCGTCGT
TTTCCAACTCGTCGGGGTTTAAGAGGGAACGCGCTGCTGGCGAGGATGTGGCGGAGACGGAGGAGTGTATGAAAGTGGGTGAGGAAGATGAAGATGGAAGTCCGAGGAAG
AAACTTAGATTAACAAAACAACAATCCGCCATTTTAGAGGACAATTTCAAAGAACACTCGAGTCTTAG
Protein sequenceShow/hide protein sequence
MDSDCNTGLLLGLGSVSGDDINDSVRSGVAGVNKKKLQVLKFDDDILPSLTLGLSFVVETATEEGCSGSPVSSFSNSSGFKRERAAGEDVAETEECMKVGEEDEDGSPRK
KLRLTKQQSAILEDNFKEHSSL