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MELO3C016855 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C016855
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionCRG16
Genome locationchr07:1556710..1557321
RNA-Seq ExpressionMELO3C016855
SyntenyMELO3C016855
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591454.1 hypothetical protein SDJN03_13800, partial [Cucurbita argyrosperma subsp. sororia]2.3e-1683.33Show/hide
Query:  AMAAVSNVSFMALVALLFAIFSIALAQSAESPAPAPASPANSVVPSLSLACVGAFVALLFGSALKA
        AMAAVS  SFMALVA+LF + S+A+AQSAESPAPAPASPA SVVPSLS+ACVGAFVAL+FGSALKA
Subjt:  AMAAVSNVSFMALVALLFAIFSIALAQSAESPAPAPASPANSVVPSLSLACVGAFVALLFGSALKA

KAG6598305.1 hypothetical protein SDJN03_08083, partial [Cucurbita argyrosperma subsp. sororia]1.2e-0656.06Show/hide
Query:  EAMAAVSNVSFMALVALLFAIFSIALAQSAESPAPAPASPANSVVPSLSLACVGAFVALLFGSALK
        E+MA VS  S +AL+A++FA+ S+A   + E+PAP+PASPA S+ PS   ACV AFVAL FGS L+
Subjt:  EAMAAVSNVSFMALVALLFAIFSIALAQSAESPAPAPASPANSVVPSLSLACVGAFVALLFGSALK

KAG7024335.1 hypothetical protein SDJN02_13149, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-1675.95Show/hide
Query:  IFFSFL------EAMAAVSNVSFMALVALLFAIFSIALAQSAESPAPAPASPANSVVPSLSLACVGAFVALLFGSALKA
        IFF FL       AMAAVS  SFMALVA+LF + S+A+AQSAESPAPAPASPA SVVPSLS+ACVGAFVAL+FGSALKA
Subjt:  IFFSFL------EAMAAVSNVSFMALVALLFAIFSIALAQSAESPAPAPASPANSVVPSLSLACVGAFVALLFGSALKA

KGN55315.1 hypothetical protein Csa_012200 [Cucumis sativus]6.0e-1786.15Show/hide
Query:  MAAVSNVSFMALVALLFAIFSIALAQSAESPAPAPASPANSVVPSLSLACVGAFVALLFGSALKA
        MAAVS VSFMALVA+LFA+ S+A+AQSAESPAP PASPANSVVPSLS ACVGAF+ALLFGSALKA
Subjt:  MAAVSNVSFMALVALLFAIFSIALAQSAESPAPAPASPANSVVPSLSLACVGAFVALLFGSALKA

KGN62403.1 hypothetical protein Csa_018595 [Cucumis sativus]5.2e-0539.84Show/hide
Query:  LFSLLYKHSHPSLSPLPNLPFLFLSQYSF-FSYKTLIFFSFLEA---------------MAAVSNVSFMALVALLFAIFSIALAQSAESPAPAPASPANS
        ++ L + HS    SP  +   ++LS Y F FS+      S L +               MAA+S VS +AL+AL+FA+ S+A   + E+PAP+PASPA S
Subjt:  LFSLLYKHSHPSLSPLPNLPFLFLSQYSF-FSYKTLIFFSFLEA---------------MAAVSNVSFMALVALLFAIFSIALAQSAESPAPAPASPANS

Query:  VVPSLSLACVGAFVALLFGSALK
        + PS   AC+ AF+AL FGS L+
Subjt:  VVPSLSLACVGAFVALLFGSALK

TrEMBL top hitse value%identityAlignment
A0A0A0LKU1 Uncharacterized protein2.5e-0539.84Show/hide
Query:  LFSLLYKHSHPSLSPLPNLPFLFLSQYSF-FSYKTLIFFSFLEA---------------MAAVSNVSFMALVALLFAIFSIALAQSAESPAPAPASPANS
        ++ L + HS    SP  +   ++LS Y F FS+      S L +               MAA+S VS +AL+AL+FA+ S+A   + E+PAP+PASPA S
Subjt:  LFSLLYKHSHPSLSPLPNLPFLFLSQYSF-FSYKTLIFFSFLEA---------------MAAVSNVSFMALVALLFAIFSIALAQSAESPAPAPASPANS

Query:  VVPSLSLACVGAFVALLFGSALK
        + PS   AC+ AF+AL FGS L+
Subjt:  VVPSLSLACVGAFVALLFGSALK

Q96504 CRG162.9e-1786.15Show/hide
Query:  MAAVSNVSFMALVALLFAIFSIALAQSAESPAPAPASPANSVVPSLSLACVGAFVALLFGSALKA
        MAAVS VSFMALVA+LFA+ S+A+AQSAESPAP PASPANSVVPSLS ACVGAF+ALLFGSALKA
Subjt:  MAAVSNVSFMALVALLFAIFSIALAQSAESPAPAPASPANSVVPSLSLACVGAFVALLFGSALKA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTCTTTTCTCTATTATATAAACACTCCCACCCTTCTCTTTCTCCGTTGCCAAACCTTCCATTCCTTTTCCTCTCTCAATATTCTTTCTTTTCTTACAAAACCCTA
ATCTTTTTCTCTTTTTTGGAAGCAATGGCCGCCGTCTCTAATGTTTCTTTCATGGCTCTTGTTGCCCTCTTGTTCGCCATCTTCTCCATTGCGCTCGCACAATCT
GCAGAGTCTCCTGCTCCTGCTCCGGCTTCTCCGGCTAACTCTGTTGTTCCGTCCTTGAGTCTTGCTTGTGTTGGTGCTTTCGTTGCTCTCCTCTTTGGATCTGCA
CTCAAGGCTTGA
mRNA sequenceShow/hide mRNA sequence
TCCTCTTTTCTCTATTATATAAACACTCCCACCCTTCTCTTTCTCCGTTGCCAAACCTTCCATTCCTTTTCCTCTCTCAATATTCTTTCTTTTCTTACAAAACCC
TAATCTTTTTCTCTTTTTTGGAAGCAATGGCCGCCGTCTCTAATGTTTCTTTCATGGCTCTTGTTGCCCTCTTGTTCGCCATCTTCTCCATTGCGCTCGCACAAT
CTGCAGAGTCTCCTGCTCCTGCTCCGGCTTCTCCGGCTAACTCTGTTGTTCCGTCCTTGAGTCTTGCTTGTGTTGGTGCTTTCGTTGCTCTCCTCTTTGGATCTG
CACTCAAGGCTTGAATGATACTTTGTACGCGTTTTGTGATTTTAGCAATGGATTCGTTTACTGATGATGCTCGATTACATTATGGAGGGTTTTTATTGACTATAT
TATTGAGTGTATAGGACATGGTTTTCGACGATGTCAAGAATTAGGTTTTATTAGAGATTGGTGGTTTGTATTCATGTATTATTATTATTCATTGTGTGTTATCTC
ATTATTAATATTGTTCCTTTTATATATCCACATTATTTGAGTAAATAAATTATTTCAGTTTTCTACTCTCTGTCTCGTCAAATTGAT
Protein sequenceShow/hide protein sequence
LFSLLYKHSHPSLSPLPNLPFLFLSQYSFFSYKTLIFFSFLEAMAAVSNVSFMALVALLFAIFSIALAQSAESPAPAPASPANSVVPSLSLACVGAFVALLFGSA
LKA