; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C017732 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C017732
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
Description30S ribosomal protein S1
Genome locationchr07:24319719..24325467
RNA-Seq ExpressionMELO3C017732
SyntenyMELO3C017732
Gene Ontology termsGO:0071840 - cellular component organization or biogenesis (biological process)
GO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR003029 - S1 domain
IPR012340 - Nucleic acid-binding, OB-fold
IPR022967 - RNA-binding domain, S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044578.1 30S ribosomal protein S1 isoform X1 [Cucumis melo var. makuwa]8.1e-17599.11Show/hide
Query:  MPIFLATIASVSTHSFLSLLASTSDASSTSSSSSSSILPLKSPSKRPSIFPSRVSLSGKPDPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRI
        MPIFLATIASVSTHSFLSLLASTSDASSTSSSSSSSILPLKSPSKRPSIFPSRVSLSGKPDPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRI
Subjt:  MPIFLATIASVSTHSFLSLLASTSDASSTSSSSSSSILPLKSPSKRPSIFPSRVSLSGKPDPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRI

Query:  EGSNAGGLLVRFYSLMGFLPFPQLSPSHSCKEPNKSIQDIAKSLTGSLISVK-VIQADERNKKLIFSEKEATWSKFSGQVGVGDVYEAKVGSLEDYGAFV
        EGSNAGGLLVRFYSLMGFLPFPQLSPSHSCKEPNKSIQDIAKSLTGSLISVK VIQADERNKKLIFSEKEATWSKFSGQVGVGDVYEAKVGSLEDYGAFV
Subjt:  EGSNAGGLLVRFYSLMGFLPFPQLSPSHSCKEPNKSIQDIAKSLTGSLISVK-VIQADERNKKLIFSEKEATWSKFSGQVGVGDVYEAKVGSLEDYGAFV

Query:  HLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDR--DKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGLG
        HLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDR  DKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGLG
Subjt:  HLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDR--DKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGLG

Query:  TIIEELQQEEGIVDVRVNRQGFEKRVVSQDLQLWLSN
        TIIEELQQEEGIVDVRVNRQGFEKRVVSQDLQLWLSN
Subjt:  TIIEELQQEEGIVDVRVNRQGFEKRVVSQDLQLWLSN

XP_004152109.1 uncharacterized protein LOC101213559 isoform X2 [Cucumis sativus]8.4e-16493.41Show/hide
Query:  MPIFLATIASVSTHSFLSLLASTSDASSTSSSSSSSILPLKSPSKRPSIFPSRVSLSGKPDPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRI
        MPIF+ATIASVS HSFLSLLASTSDASSTSSSSSS ILPLKSPSKR SIFPSRVSLSGKPDPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRI
Subjt:  MPIFLATIASVSTHSFLSLLASTSDASSTSSSSSSSILPLKSPSKRPSIFPSRVSLSGKPDPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRI

Query:  EGSNAGGLLVRFYSLMGFLPFPQLSPSHSCKEPNKSIQDIAKSLTGSLISVKVIQADERNKKLIFSEKEATWSKFSGQVGVGDVYEAKVGSLEDYGAFVH
        EGSNAGGLLVRFYSL+GFLPFPQLSPSHSCKEP KSIQDIAKSL GSLISVKVIQADE+N+KLIFSEKEA  SKFSGQV VGDVYE KVGS+EDYGAFVH
Subjt:  EGSNAGGLLVRFYSLMGFLPFPQLSPSHSCKEPNKSIQDIAKSLTGSLISVKVIQADERNKKLIFSEKEATWSKFSGQVGVGDVYEAKVGSLEDYGAFVH

Query:  LRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRDKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGLGTII
        LR SDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINV+++KSRITLSIRQLEEDPLLETLDKVIPQ+SSAEPDSFGPK DSEIIPLPGL TII
Subjt:  LRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRDKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGLGTII

Query:  EELQQEEGIVDVRVNRQGFEKRVVSQDLQLWLSN
        EEL QEEGIVDVRVNRQGFEKRVVSQDLQLWLSN
Subjt:  EELQQEEGIVDVRVNRQGFEKRVVSQDLQLWLSN

XP_008454000.1 PREDICTED: 30S ribosomal protein S1 isoform X1 [Cucumis melo]1.0e-177100Show/hide
Query:  MPIFLATIASVSTHSFLSLLASTSDASSTSSSSSSSILPLKSPSKRPSIFPSRVSLSGKPDPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRI
        MPIFLATIASVSTHSFLSLLASTSDASSTSSSSSSSILPLKSPSKRPSIFPSRVSLSGKPDPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRI
Subjt:  MPIFLATIASVSTHSFLSLLASTSDASSTSSSSSSSILPLKSPSKRPSIFPSRVSLSGKPDPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRI

Query:  EGSNAGGLLVRFYSLMGFLPFPQLSPSHSCKEPNKSIQDIAKSLTGSLISVKVIQADERNKKLIFSEKEATWSKFSGQVGVGDVYEAKVGSLEDYGAFVH
        EGSNAGGLLVRFYSLMGFLPFPQLSPSHSCKEPNKSIQDIAKSLTGSLISVKVIQADERNKKLIFSEKEATWSKFSGQVGVGDVYEAKVGSLEDYGAFVH
Subjt:  EGSNAGGLLVRFYSLMGFLPFPQLSPSHSCKEPNKSIQDIAKSLTGSLISVKVIQADERNKKLIFSEKEATWSKFSGQVGVGDVYEAKVGSLEDYGAFVH

Query:  LRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRDKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGLGTII
        LRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRDKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGLGTII
Subjt:  LRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRDKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGLGTII

Query:  EELQQEEGIVDVRVNRQGFEKRVVSQDLQLWLSN
        EELQQEEGIVDVRVNRQGFEKRVVSQDLQLWLSN
Subjt:  EELQQEEGIVDVRVNRQGFEKRVVSQDLQLWLSN

XP_011653045.1 uncharacterized protein LOC101213559 isoform X1 [Cucumis sativus]4.6e-16292.31Show/hide
Query:  MPIFLATIASVSTHSFLSLLASTSDASSTSSSSSSSILPLKSPSKRPSIFPSRVSLSGKPDPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRI
        MPIF+ATIASVS HSFLSLLASTSDASSTSSSSSS ILPLKSPSKR SIFPSRVSLSGKPDPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRI
Subjt:  MPIFLATIASVSTHSFLSLLASTSDASSTSSSSSSSILPLKSPSKRPSIFPSRVSLSGKPDPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRI

Query:  EGSNAGGLLVRFYSLMGFLPFPQLSPSHSCKEPNKSIQDIAKSLTGSLISVKVIQADERNKKLIFSEKEATWSKFSGQVGVGDVYEAKVGSLEDYGAFVH
        EGSNAGGLLVRFYSL+GFLPFPQLSPSHSCKEP KSIQDIAKSL GSLISVKVIQADE+N+KLIFSEKEA  SKFSGQV VGDVYE KVGS+EDYGAFVH
Subjt:  EGSNAGGLLVRFYSLMGFLPFPQLSPSHSCKEPNKSIQDIAKSLTGSLISVKVIQADERNKKLIFSEKEATWSKFSGQVGVGDVYEAKVGSLEDYGAFVH

Query:  LRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRDKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGLGTII
        LR SDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINV+++KSRITLSIRQLEEDPLLETLDKVIPQ+SSAEPDSFGPK DSEIIPLPGL TII
Subjt:  LRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRDKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGLGTII

Query:  EELQQEEG----IVDVRVNRQGFEKRVVSQDLQLWLSN
        EEL QEEG    IVDVRVNRQGFEKRVVSQDLQLWLSN
Subjt:  EELQQEEG----IVDVRVNRQGFEKRVVSQDLQLWLSN

XP_038897871.1 30S ribosomal protein S1 homolog B [Benincasa hispida]1.3e-15689.02Show/hide
Query:  MPIFLATIASVSTHSFLSLLASTSDASSTSSSSSSSILPLKSPSKRPSIFPSRVSLSGKPDPIAGVLDT---SPESVRRARRSADWKAAREYLDSGFIYE
        MPIF AT+ SV  HSFLSLLAST+D     +SS+S ILP KSPSKRPS FP+RVSLSGKPDPIAGVLDT   SPES+RRARRSADWKAAREYLD+GFIYE
Subjt:  MPIFLATIASVSTHSFLSLLASTSDASSTSSSSSSSILPLKSPSKRPSIFPSRVSLSGKPDPIAGVLDT---SPESVRRARRSADWKAAREYLDSGFIYE

Query:  GRIEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCKEPNKSIQDIAKSLTGSLISVKVIQADERNKKLIFSEKEATWSKFSGQVGVGDVYEAKVGSLEDYGA
        GRIEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCKEP KSIQDIAKSL GSLISVKVIQADERNKKLIFSEKEA WSKFS QVGVGDVYEA+VGS+EDYGA
Subjt:  GRIEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCKEPNKSIQDIAKSLTGSLISVKVIQADERNKKLIFSEKEATWSKFSGQVGVGDVYEAKVGSLEDYGA

Query:  FVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRDKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGLG
        FVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRDKSRITLSI+QLEEDPLLETLDKVIPQ  SAEPDSFGPKSDSEI+PLPGL 
Subjt:  FVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRDKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGLG

Query:  TIIEELQQEEGIVDVRVNRQGFEKRVVSQDLQLWLSN
        TIIEEL QE+GIVD+ VNRQGFEKRVVSQDLQLWLSN
Subjt:  TIIEELQQEEGIVDVRVNRQGFEKRVVSQDLQLWLSN

TrEMBL top hitse value%identityAlignment
A0A0A0KTX2 Uncharacterized protein4.1e-16493.41Show/hide
Query:  MPIFLATIASVSTHSFLSLLASTSDASSTSSSSSSSILPLKSPSKRPSIFPSRVSLSGKPDPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRI
        MPIF+ATIASVS HSFLSLLASTSDASSTSSSSSS ILPLKSPSKR SIFPSRVSLSGKPDPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRI
Subjt:  MPIFLATIASVSTHSFLSLLASTSDASSTSSSSSSSILPLKSPSKRPSIFPSRVSLSGKPDPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRI

Query:  EGSNAGGLLVRFYSLMGFLPFPQLSPSHSCKEPNKSIQDIAKSLTGSLISVKVIQADERNKKLIFSEKEATWSKFSGQVGVGDVYEAKVGSLEDYGAFVH
        EGSNAGGLLVRFYSL+GFLPFPQLSPSHSCKEP KSIQDIAKSL GSLISVKVIQADE+N+KLIFSEKEA  SKFSGQV VGDVYE KVGS+EDYGAFVH
Subjt:  EGSNAGGLLVRFYSLMGFLPFPQLSPSHSCKEPNKSIQDIAKSLTGSLISVKVIQADERNKKLIFSEKEATWSKFSGQVGVGDVYEAKVGSLEDYGAFVH

Query:  LRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRDKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGLGTII
        LR SDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINV+++KSRITLSIRQLEEDPLLETLDKVIPQ+SSAEPDSFGPK DSEIIPLPGL TII
Subjt:  LRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRDKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGLGTII

Query:  EELQQEEGIVDVRVNRQGFEKRVVSQDLQLWLSN
        EEL QEEGIVDVRVNRQGFEKRVVSQDLQLWLSN
Subjt:  EELQQEEGIVDVRVNRQGFEKRVVSQDLQLWLSN

A0A1S3BXL4 30S ribosomal protein S1 isoform X15.0e-178100Show/hide
Query:  MPIFLATIASVSTHSFLSLLASTSDASSTSSSSSSSILPLKSPSKRPSIFPSRVSLSGKPDPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRI
        MPIFLATIASVSTHSFLSLLASTSDASSTSSSSSSSILPLKSPSKRPSIFPSRVSLSGKPDPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRI
Subjt:  MPIFLATIASVSTHSFLSLLASTSDASSTSSSSSSSILPLKSPSKRPSIFPSRVSLSGKPDPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRI

Query:  EGSNAGGLLVRFYSLMGFLPFPQLSPSHSCKEPNKSIQDIAKSLTGSLISVKVIQADERNKKLIFSEKEATWSKFSGQVGVGDVYEAKVGSLEDYGAFVH
        EGSNAGGLLVRFYSLMGFLPFPQLSPSHSCKEPNKSIQDIAKSLTGSLISVKVIQADERNKKLIFSEKEATWSKFSGQVGVGDVYEAKVGSLEDYGAFVH
Subjt:  EGSNAGGLLVRFYSLMGFLPFPQLSPSHSCKEPNKSIQDIAKSLTGSLISVKVIQADERNKKLIFSEKEATWSKFSGQVGVGDVYEAKVGSLEDYGAFVH

Query:  LRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRDKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGLGTII
        LRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRDKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGLGTII
Subjt:  LRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRDKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGLGTII

Query:  EELQQEEGIVDVRVNRQGFEKRVVSQDLQLWLSN
        EELQQEEGIVDVRVNRQGFEKRVVSQDLQLWLSN
Subjt:  EELQQEEGIVDVRVNRQGFEKRVVSQDLQLWLSN

A0A5A7TNY0 30S ribosomal protein S1 isoform X13.9e-17599.11Show/hide
Query:  MPIFLATIASVSTHSFLSLLASTSDASSTSSSSSSSILPLKSPSKRPSIFPSRVSLSGKPDPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRI
        MPIFLATIASVSTHSFLSLLASTSDASSTSSSSSSSILPLKSPSKRPSIFPSRVSLSGKPDPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRI
Subjt:  MPIFLATIASVSTHSFLSLLASTSDASSTSSSSSSSILPLKSPSKRPSIFPSRVSLSGKPDPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRI

Query:  EGSNAGGLLVRFYSLMGFLPFPQLSPSHSCKEPNKSIQDIAKSLTGSLISVK-VIQADERNKKLIFSEKEATWSKFSGQVGVGDVYEAKVGSLEDYGAFV
        EGSNAGGLLVRFYSLMGFLPFPQLSPSHSCKEPNKSIQDIAKSLTGSLISVK VIQADERNKKLIFSEKEATWSKFSGQVGVGDVYEAKVGSLEDYGAFV
Subjt:  EGSNAGGLLVRFYSLMGFLPFPQLSPSHSCKEPNKSIQDIAKSLTGSLISVK-VIQADERNKKLIFSEKEATWSKFSGQVGVGDVYEAKVGSLEDYGAFV

Query:  HLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDR--DKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGLG
        HLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDR  DKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGLG
Subjt:  HLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDR--DKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGLG

Query:  TIIEELQQEEGIVDVRVNRQGFEKRVVSQDLQLWLSN
        TIIEELQQEEGIVDVRVNRQGFEKRVVSQDLQLWLSN
Subjt:  TIIEELQQEEGIVDVRVNRQGFEKRVVSQDLQLWLSN

A0A6J1GVD7 LOW QUALITY PROTEIN: uncharacterized protein LOC1114575275.0e-14683.73Show/hide
Query:  MPIFLA-TIASVSTHSFLSLLASTSDASSTSSSSSSSILPLKSPSKRPSIFPSRVSLSGKPDPIAGVLD---TSPESVRRARRSADWKAAREYLDSGFIY
        MPIF A T+ S+S HSFLSL AS   A +++S S+S +L  KSPSKRPS F +RVSLSGKP+PIAGVL+   +SPESVRRARRSADWK AREYLDSGFI+
Subjt:  MPIFLA-TIASVSTHSFLSLLASTSDASSTSSSSSSSILPLKSPSKRPSIFPSRVSLSGKPDPIAGVLD---TSPESVRRARRSADWKAAREYLDSGFIY

Query:  EGRIEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCKEPNKSIQDIAKSLTGSLISVKVIQADERNKKLIFSEKEATWSKFSGQVGVGDVYEAKVGSLEDYG
        +GRIEGSNAGGLLVRFYSL+GFLPFP LSP+HSCKEP KSIQDIAKSL GSLI VKVIQADE+NK LIFSEKEA WSKFS +VGVGDVYEA+VGSLEDYG
Subjt:  EGRIEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCKEPNKSIQDIAKSLTGSLISVKVIQADERNKKLIFSEKEATWSKFSGQVGVGDVYEAKVGSLEDYG

Query:  AFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRDKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGL
        AFVHLRFSDGLYHLTGLVH+SEVSWDLVQDVRDILSEGDEV VKVI+VDRDKSRITLSI+QLEEDPLLETLDKVIPQD SAEPDSFGPKSDSEIIPLPGL
Subjt:  AFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRDKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGL

Query:  GTIIEELQQEEGIVDVRVNRQGFEKRVVSQDLQLWLSN
         TI EEL QEEGI DV +NRQGFEKRVVSQDLQLWLSN
Subjt:  GTIIEELQQEEGIVDVRVNRQGFEKRVVSQDLQLWLSN

A0A6J1IUF3 uncharacterized protein LOC1114794061.0e-14684.62Show/hide
Query:  MPIFLA-TIASVSTHSFLSLLASTSDASSTSSSSSSSILPLKSPSKRPSIFPSRVSLSGKPDPIAGVLD---TSPESVRRARRSADWKAAREYLDSGFIY
        MPIF A T+ S+S HSFLSLLAST DAS   S SSS +L  KSPSKRPS F +RVSLSGKP+PIAGVL+   +SPESVRRARRSADWK AREYLDSGFI+
Subjt:  MPIFLA-TIASVSTHSFLSLLASTSDASSTSSSSSSSILPLKSPSKRPSIFPSRVSLSGKPDPIAGVLD---TSPESVRRARRSADWKAAREYLDSGFIY

Query:  EGRIEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCKEPNKSIQDIAKSLTGSLISVKVIQADERNKKLIFSEKEATWSKFSGQVGVGDVYEAKVGSLEDYG
        +GRIEGSNAGGLLVRFYSL+GFLPFP LSP+HSCKEP KSIQDIAKSL GSLI VKVIQADE+NK LIFSEKEA WSKFS QVGVGDVYEA+VGS+EDYG
Subjt:  EGRIEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCKEPNKSIQDIAKSLTGSLISVKVIQADERNKKLIFSEKEATWSKFSGQVGVGDVYEAKVGSLEDYG

Query:  AFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRDKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGL
        AFVHLRFSDG YHLTGLVH+SEVSWDLVQDVRDILSEGDEV VKV++VDRDKSRITLSI+QLEEDPLLETLDKVIPQD SAEPDSFGPKSDSEIIPLPGL
Subjt:  AFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRDKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGL

Query:  GTIIEELQQEEGIVDVRVNRQGFEKRVVSQDLQLWLSN
         TI EEL QEEGI DV +NRQGFEKRVVSQDLQLWLSN
Subjt:  GTIIEELQQEEGIVDVRVNRQGFEKRVVSQDLQLWLSN

SwissProt top hitse value%identityAlignment
P29344 30S ribosomal protein S1, chloroplastic1.7e-2131.05Show/hide
Query:  SVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCKEPNKSIQDIAKSLTGSLISVKVIQADERNKKLIFSEKEATW
        S+R+ +    W+  R+      + +G+I G+N GG++     L GF+PF Q+S   S +E           L    I +K ++ DE   +L+ S ++A  
Subjt:  SVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCKEPNKSIQDIAKSLTGSLISVKVIQADERNKKLIFSEKEATW

Query:  SKFSGQVGVGDVYEAKVGSLEDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRDKSRITLSIRQLEEDP
        +    Q+G+G V    V SL+ YGAF+ +        + GL+HVS++S D V D+  +L  GD + V +++ DR++ R++LS ++LE  P
Subjt:  SKFSGQVGVGDVYEAKVGSLEDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRDKSRITLSIRQLEEDP

P46228 30S ribosomal protein S15.0e-1828.95Show/hide
Query:  SVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCKEPNKSIQDIAKSLTGSLISVKVIQADERNKKLIFSEKEATW
        S+RR      W+  R+           +  +N GG LVR   L GF+P   +S +   KE           L G  + +K ++ DE   +L+ S + A  
Subjt:  SVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCKEPNKSIQDIAKSLTGSLISVKVIQADERNKKLIFSEKEATW

Query:  SKFSGQVGVGDVYEAKVGSLEDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRDKSRITLSIRQLEEDP
         +   ++ VG+V    V  ++ YGAF+ +        ++GL+H+SE+S D ++    + +  DEV V +I++D ++ RI+LS +QLE +P
Subjt:  SKFSGQVGVGDVYEAKVGSLEDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRDKSRITLSIRQLEEDP

P74142 30S ribosomal protein S1 homolog B2.9e-1829.35Show/hide
Query:  SVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCKEPNKSIQDIAKSLTGSLISVKVIQADERNKKLIFSEKEATW
        S R+ +    W+   E  +SG   E  + G+N GG++     L GF+P      SH   + N        +L G ++   +++A++ N KL+ +++    
Subjt:  SVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCKEPNKSIQDIAKSLTGSLISVKVIQADERNKKLIFSEKEATW

Query:  SKFSGQVGVGDVYEAKVGSLEDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRDKSRITLSIRQLEEDP--LLETLDKV
        ++  G++  G++YE KV  ++ YG FV +        +TGL+HVS+VS   V  +  + + G  ++V V  +D  K+RI+LS R LE  P  L+E  D++
Subjt:  SKFSGQVGVGDVYEAKVGSLEDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRDKSRITLSIRQLEEDP--LLETLDKV

Query:  I
        +
Subjt:  I

Q93VC7 30S ribosomal protein S1, chloroplastic6.3e-2131.58Show/hide
Query:  SVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCKEPNKSIQDIAKSLTGSLISVKVIQADERNKKLIFSEKEATW
        S+R  +    W+  R+      I + ++ G+N GGL+     L GF+PF Q+S   + +E           L    I +K ++ DE   KL+ S ++A  
Subjt:  SVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCKEPNKSIQDIAKSLTGSLISVKVIQADERNKKLIFSEKEATW

Query:  SKFSGQVGVGDVYEAKVGSLEDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRDKSRITLSIRQLEEDP
        +    Q+G+G V    V SL+ YGAF+ +        + GL+HVS++S D V D+  +L  GD + V +++ DRD+ R++LS ++LE  P
Subjt:  SKFSGQVGVGDVYEAKVGSLEDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRDKSRITLSIRQLEEDP

Q9JZ44 30S ribosomal protein S12.2e-1830.77Show/hide
Query:  SVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCKEPNKSIQDIAKSLTGSLISVKVIQADERNKKLIFSEK---E
        S  +A+R+ADW A  E +++G I  G I G   GGL V   S+  FLP   +          + ++D      G  I  KVI+ D++   ++ S +   E
Subjt:  SVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCKEPNKSIQDIAKSLTGSLISVKVIQADERNKKLIFSEK---E

Query:  ATWSK----FSGQVGVGDVYEAKVGSLEDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRDKSRITLSIRQLEEDPLLE
        AT  +        +  G V +  V ++ DYGAFV L   DGL H+T      +++W  V+   ++L  G EV  KV+  D++K R++L ++QL EDP   
Subjt:  ATWSK----FSGQVGVGDVYEAKVGSLEDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRDKSRITLSIRQLEEDPLLE

Query:  TLDKVIPQDSSAEPDSFGPKSDSEIIPLPGLGTIIEELQQEEGIVDV
         L +  PQ         G +   ++  L   G  +E  Q  EG+V V
Subjt:  TLDKVIPQDSSAEPDSFGPKSDSEIIPLPGLGTIIEELQQEEGIVDV

Arabidopsis top hitse value%identityAlignment
AT1G12800.1 Nucleic acid-binding, OB-fold-like protein5.0e-1331.38Show/hide
Query:  QDIAKSLTGSLISVKVIQADERNKKLIFS----EKEATWSK---FSGQVGVGDVYEAKVGSLEDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDI
        Q    S  G  I V V+ A+  ++KLIFS    E E    K      ++ VGDV +  +  +  +G F  L        +  LVH SEVSWD   D    
Subjt:  QDIAKSLTGSLISVKVIQADERNKKLIFS----EKEATWSK---FSGQVGVGDVYEAKVGSLEDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDI

Query:  LSEGDEVTVKVINVDRDKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPL--PGLGTIIEELQQEEGIVDVRVNR
           G  V  KV  +D    RI LS++++  DPL E L+ V+  D+    D  G +  +  +    P + ++I+EL+  EGI  V  +R
Subjt:  LSEGDEVTVKVINVDRDKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPL--PGLGTIIEELQQEEGIVDVRVNR

AT3G23700.1 Nucleic acid-binding proteins superfamily1.0e-9558.9Show/hide
Query:  SFLSL-LASTSDASSTSSSSSSSILPLKSPSKRPSIFPSRVSLSGKPDPIAG-----VLDTSPESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGL
        +FLS  L     +SS+SS+ +S +  +KS S   +    R S       +       + DTS E+   A   +DWK A+ Y  SG  +EG ++G N GGL
Subjt:  SFLSL-LASTSDASSTSSSSSSSILPLKSPSKRPSIFPSRVSLSGKPDPIAG-----VLDTSPESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGL

Query:  LVRFYSLMGFLPFPQLSPSHSCKEPNKSIQDIAKSLTGSLISVKVIQADERNKKLIFSEKEATWSKFSGQVGVGDVYEAKVGSLEDYGAFVHLRFSDGLY
        L+RF+SL+GFLP+PQLSPS SCKEP KSI +IAK+L GS + VKV+QADE N+KLI SEK A W K+S  V VGDV+  +VGS+EDYGAF+HLRF DGLY
Subjt:  LVRFYSLMGFLPFPQLSPSHSCKEPNKSIQDIAKSLTGSLISVKVIQADERNKKLIFSEKEATWSKFSGQVGVGDVYEAKVGSLEDYGAFVHLRFSDGLY

Query:  HLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRDKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGLGTIIEELQQEEG
        HLTGLVHVSEVSWD VQDVRD+L +GDEV V V N+D++KSRITLSI+QLE+DPLLETLDKVI +DSS    S    +   I PLPGL TI+EEL +E+G
Subjt:  HLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRDKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGLGTIIEELQQEEG

Query:  IVDVRVNRQGFEKRVVSQDLQLWLSN
        I  V++NRQGFEKRVVSQDLQLWLSN
Subjt:  IVDVRVNRQGFEKRVVSQDLQLWLSN

AT4G29060.1 elongation factor Ts family protein3.1e-0735.37Show/hide
Query:  GDVYEAKVGSLEDYGAFVHL-RFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRDKSRITLSIRQLEEDP
        G  +  KV +++ +GAFV    F+D      GLVHVS++S + V+DV  +++ G EV V+++  D +  RI+L++R+ ++ P
Subjt:  GDVYEAKVGSLEDYGAFVHL-RFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRDKSRITLSIRQLEEDP

AT4G29060.2 elongation factor Ts family protein3.1e-0735.37Show/hide
Query:  GDVYEAKVGSLEDYGAFVHL-RFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRDKSRITLSIRQLEEDP
        G  +  KV +++ +GAFV    F+D      GLVHVS++S + V+DV  +++ G EV V+++  D +  RI+L++R+ ++ P
Subjt:  GDVYEAKVGSLEDYGAFVHL-RFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRDKSRITLSIRQLEEDP

AT5G30510.1 ribosomal protein S14.5e-2231.58Show/hide
Query:  SVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCKEPNKSIQDIAKSLTGSLISVKVIQADERNKKLIFSEKEATW
        S+R  +    W+  R+      I + ++ G+N GGL+     L GF+PF Q+S   + +E           L    I +K ++ DE   KL+ S ++A  
Subjt:  SVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLVRFYSLMGFLPFPQLSPSHSCKEPNKSIQDIAKSLTGSLISVKVIQADERNKKLIFSEKEATW

Query:  SKFSGQVGVGDVYEAKVGSLEDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRDKSRITLSIRQLEEDP
        +    Q+G+G V    V SL+ YGAF+ +        + GL+HVS++S D V D+  +L  GD + V +++ DRD+ R++LS ++LE  P
Subjt:  SKFSGQVGVGDVYEAKVGSLEDYGAFVHLRFSDGLYHLTGLVHVSEVSWDLVQDVRDILSEGDEVTVKVINVDRDKSRITLSIRQLEEDP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAATCTTTCTTGCAACCATCGCCTCTGTCTCTACTCATTCCTTCCTCTCACTCCTTGCTTCCACTTCTGATGCTTCTTCAACCTCCTCCTCCTCCTCCTCCTCCAT
TTTACCACTCAAATCCCCCTCTAAACGCCCTTCCATTTTCCCCTCCAGAGTTTCCCTCTCCGGAAAACCTGACCCCATTGCCGGAGTTCTGGACACCTCCCCGGAATCCG
TTCGACGTGCTCGGAGATCTGCTGATTGGAAGGCAGCGAGGGAATACCTTGATAGTGGATTTATCTATGAGGGCAGGATCGAAGGTTCAAATGCTGGAGGCTTACTTGTC
CGATTTTATTCTCTTATGGGGTTTCTTCCATTCCCTCAATTGAGTCCGTCTCATTCTTGTAAAGAACCAAACAAGAGTATTCAAGATATTGCAAAAAGCTTAACTGGTTC
GCTTATATCAGTAAAGGTAATCCAAGCAGATGAGAGAAACAAGAAATTGATATTTTCAGAGAAGGAAGCTACGTGGTCAAAGTTTTCTGGGCAAGTGGGTGTGGGAGATG
TCTATGAAGCTAAAGTTGGATCTCTGGAGGATTATGGTGCTTTTGTACATCTACGTTTCTCTGATGGTCTTTATCATCTTACTGGGCTAGTACATGTATCAGAAGTTTCA
TGGGATCTAGTTCAGGATGTACGAGACATATTAAGTGAGGGTGACGAAGTGACAGTGAAAGTCATTAATGTTGATAGGGATAAGTCTAGGATCACATTGTCGATCAGACA
ACTCGAGGAAGATCCACTTTTAGAAACATTGGACAAAGTAATACCGCAGGACAGTTCTGCTGAACCTGATTCTTTCGGACCTAAAAGCGACAGCGAAATAATACCCCTCC
CTGGACTTGGAACAATAATTGAAGAGCTACAGCAGGAAGAGGGTATAGTAGATGTTCGTGTCAACCGACAAGGATTTGAGAAACGGGTGGTTTCACAAGACCTACAGCTT
TGGCTATCGAATGTAAGTTGGTTTTGTTCCTATGAATATGATGTGGGGTTTCGTCATTGGCTTCACTTTTTCGCCTCTCATCTCATTGCTACTGTAGGCACCTCCCATTG
A
mRNA sequenceShow/hide mRNA sequence
CGCTCCTCCCCGCCATTGTCTTCCCTCTTTCCATTCCCATAATCATGCCAATCTTTCTTGCAACCATCGCCTCTGTCTCTACTCATTCCTTCCTCTCACTCCTTGCTTCC
ACTTCTGATGCTTCTTCAACCTCCTCCTCCTCCTCCTCCTCCATTTTACCACTCAAATCCCCCTCTAAACGCCCTTCCATTTTCCCCTCCAGAGTTTCCCTCTCCGGAAA
ACCTGACCCCATTGCCGGAGTTCTGGACACCTCCCCGGAATCCGTTCGACGTGCTCGGAGATCTGCTGATTGGAAGGCAGCGAGGGAATACCTTGATAGTGGATTTATCT
ATGAGGGCAGGATCGAAGGTTCAAATGCTGGAGGCTTACTTGTCCGATTTTATTCTCTTATGGGGTTTCTTCCATTCCCTCAATTGAGTCCGTCTCATTCTTGTAAAGAA
CCAAACAAGAGTATTCAAGATATTGCAAAAAGCTTAACTGGTTCGCTTATATCAGTAAAGGTAATCCAAGCAGATGAGAGAAACAAGAAATTGATATTTTCAGAGAAGGA
AGCTACGTGGTCAAAGTTTTCTGGGCAAGTGGGTGTGGGAGATGTCTATGAAGCTAAAGTTGGATCTCTGGAGGATTATGGTGCTTTTGTACATCTACGTTTCTCTGATG
GTCTTTATCATCTTACTGGGCTAGTACATGTATCAGAAGTTTCATGGGATCTAGTTCAGGATGTACGAGACATATTAAGTGAGGGTGACGAAGTGACAGTGAAAGTCATT
AATGTTGATAGGGATAAGTCTAGGATCACATTGTCGATCAGACAACTCGAGGAAGATCCACTTTTAGAAACATTGGACAAAGTAATACCGCAGGACAGTTCTGCTGAACC
TGATTCTTTCGGACCTAAAAGCGACAGCGAAATAATACCCCTCCCTGGACTTGGAACAATAATTGAAGAGCTACAGCAGGAAGAGGGTATAGTAGATGTTCGTGTCAACC
GACAAGGATTTGAGAAACGGGTGGTTTCACAAGACCTACAGCTTTGGCTATCGAATGTAAGTTGGTTTTGTTCCTATGAATATGATGTGGGGTTTCGTCATTGGCTTCAC
TTTTTCGCCTCTCATCTCATTGCTACTGTAGGCACCTCCCATTGAAAAGAAGTTCACTCTCCTTGCTCGTGCCGGGAGGCAGGTTCAAGAAATTCAGCTGACAACATCAC
TCGATCAGGAAGGTATAAAGAGGGCATTGCAGCGAGTGTTGGAACGTGTCCCATGATTTCGGAAACAAAGTTCGTTTTTGTTCGATTTTGTATGAAGTTTTCTGTAAAGA
AGATGATGCCAACTCAATTGTTTCCAGTAAGTTGTATATTTTGTCTGATCTCTACATCTATTCTAATGGTAAAAGTAAAAGGTGTTGTAAGCATGAATGCTCGATCCTCG
TATAACAACAGCCTTCTGCTTGGAAGACTTGTAGTTTTTGCTTTTCGTAGTCAATATTATATATATGTATGTATGTACATATTCTTTGTTTCATTGAATTCAAAGAAAAT
TTC
Protein sequenceShow/hide protein sequence
MPIFLATIASVSTHSFLSLLASTSDASSTSSSSSSSILPLKSPSKRPSIFPSRVSLSGKPDPIAGVLDTSPESVRRARRSADWKAAREYLDSGFIYEGRIEGSNAGGLLV
RFYSLMGFLPFPQLSPSHSCKEPNKSIQDIAKSLTGSLISVKVIQADERNKKLIFSEKEATWSKFSGQVGVGDVYEAKVGSLEDYGAFVHLRFSDGLYHLTGLVHVSEVS
WDLVQDVRDILSEGDEVTVKVINVDRDKSRITLSIRQLEEDPLLETLDKVIPQDSSAEPDSFGPKSDSEIIPLPGLGTIIEELQQEEGIVDVRVNRQGFEKRVVSQDLQL
WLSNVSWFCSYEYDVGFRHWLHFFASHLIATVGTSH