; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C017993 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C017993
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
Description40S ribosomal protein S29-like
Genome locationchr07:26123678..26125368
RNA-Seq ExpressionMELO3C017993
SyntenyMELO3C017993
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001209 - Ribosomal protein S14
IPR039744 - 40S ribosomal protein S29/30S ribosomal protein S14 type Z
IPR043140 - Ribosomal protein S14/S29


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7011614.1 40S ribosomal protein S29, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-2796.55Show/hide
Query:  TIMGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
        +IMGHSNVWNSHPK+YGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
Subjt:  TIMGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR

XP_002271801.1 PREDICTED: 40S ribosomal protein S29 [Vitis vinifera]2.4e-27100Show/hide
Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
        MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR

XP_011078121.1 40S ribosomal protein S29 [Sesamum indicum]3.1e-2798.21Show/hide
Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
        MGHSN+WNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR

XP_015866898.1 40S ribosomal protein S29 [Ziziphus jujuba]4.1e-2798.21Show/hide
Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
        MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYG+MCCRQCFRSNAKEIGFIKYR
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR

XP_018827642.1 40S ribosomal protein S29-like [Juglans regia]3.1e-2798.25Show/hide
Query:  IMGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
        IMGHSNVWNSHPKNYGPGSR CRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
Subjt:  IMGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR

TrEMBL top hitse value%identityAlignment
A0A1S3BZQ2 40S ribosomal protein S291.2e-27100Show/hide
Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
        MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR

A0A1S3V2W1 40S ribosomal protein S291.2e-27100Show/hide
Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
        MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR

A0A2G9HKH9 40S ribosomal protein S291.2e-27100Show/hide
Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
        MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR

A0A2P5DND1 Ribosomal protein1.2e-27100Show/hide
Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
        MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR

A0A6J5Y987 Uncharacterized protein1.2e-27100Show/hide
Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
        MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR

SwissProt top hitse value%identityAlignment
Q4PM47 40S ribosomal protein S294.7e-1870.37Show/hide
Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK
        MGH N+W SHP+ YGPGSR CRVC N HGLIRKYGL  CR+CFR  A +IGF K
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK

Q5I7K3 40S ribosomal protein S297.3e-2791.07Show/hide
Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
        MGHSNVWNSHPKNYG GSR CRVCGN HGLIRKYGLMCCRQCFRS+AK+IGFIKYR
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR

Q680P8 40S ribosomal protein S294.3e-2792.86Show/hide
Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
        MGHSNVWNSHPK YGPGSR CRVCGN HGLIRKYGL CCRQCFRSNAKEIGFIKYR
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR

Q757G1 40S ribosomal protein S298.1e-1869.64Show/hide
Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
        M H NVW SHP+NYG GSR CRVC +  GLIRKYGL  CRQCFR  A +IGF KYR
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR

Q7XYB0 40S ribosomal protein S293.0e-2069.64Show/hide
Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
        MGH N+W SHP+ YG GSR+C++CGN HGLIRKY +  CRQCFR  AK+IGFIKYR
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR

Arabidopsis top hitse value%identityAlignment
AT3G43980.1 Ribosomal protein S14p/S29e family protein3.0e-2892.86Show/hide
Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
        MGHSNVWNSHPK YGPGSR CRVCGN HGLIRKYGL CCRQCFRSNAKEIGFIKYR
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR

AT3G44010.1 Ribosomal protein S14p/S29e family protein3.0e-2892.86Show/hide
Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
        MGHSNVWNSHPK YGPGSR CRVCGN HGLIRKYGL CCRQCFRSNAKEIGFIKYR
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR

AT4G33865.1 Ribosomal protein S14p/S29e family protein3.0e-2892.86Show/hide
Query:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
        MGHSNVWNSHPK YGPGSR CRVCGN HGLIRKYGL CCRQCFRSNAKEIGFIKYR
Subjt:  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGGTTTATCTTGTATAAAACACGCTTTTGCCGCCTTCTCCTATCTCACCAAATTTTGTGCCGTCTTCGCATTGTGATTTCGAAGCATCTCAATACCCTCACAATCATGGG
GCACTCCAACGTTTGGAACTCTCATCCTAAGAACTATGGCCCTGGTTCTCGCACTTGTCGTGTGTGCGGAAATCCCCATGGGTTGATCAGGAAGTATGGACTTATGTGTT
GCAGACAATGCTTCCGCAGCAATGCCAAGGAAATTGGTTTCATCAAGTACCGCTAA
mRNA sequenceShow/hide mRNA sequence
AGGGTTTATCTTGTATAAAACACGCTTTTGCCGCCTTCTCCTATCTCACCAAATTTTGTGCCGTCTTCGCATTGTGATTTCGAAGCATCTCAATACCCTCACAATCATGG
GGCACTCCAACGTTTGGAACTCTCATCCTAAGAACTATGGCCCTGGTTCTCGCACTTGTCGTGTGTGCGGAAATCCCCATGGGTTGATCAGGAAGTATGGACTTATGTGT
TGCAGACAATGCTTCCGCAGCAATGCCAAGGAAATTGGTTTCATCAAGTACCGCTAAGAAGCTAATTATCCCTAGAAGAGAGAATGGGTTGAATTTATATTGAAGAACGT
TTCCCATGTTTTGCTTTTGTTTACTCCGTATGGAATATGAAGTGATTGTTAGAAGACGTTTTTGACACTTTTGTTCTGAACATTTAAAGTTTCTTAATTGAGCTTCTTGA
GATTATTTTGACATATATTCCTTCTATTATTATTTTTAAGTTCTTAAGCATGCTTGATGTTGTGTCACCTTGTCAGTTTAGGAAGTGGAGGGTTTAGGCTATATGGTATT
GTTAATCAGTTTGTGATTGTAGTTAAACTAATTACTAGACTGTGTCTTAATTCCTTTAGTCTCTAAA
Protein sequenceShow/hide protein sequence
GFILYKTRFCRLLLSHQILCRLRIVISKHLNTLTIMGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR