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MELO3C018111 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C018111
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionTransposon Ty3-I Gag-Pol polyprotein
Genome locationchr04:10223784..10224014
RNA-Seq ExpressionMELO3C018111
SyntenyMELO3C018111
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026294.1 cytochrome b561 and DOMON domain-containing protein [Cucumis melo var. makuwa]2.1e-0868.18Show/hide
Query:  ERLSSKDMTNGCKEKFGDKLHFDEITSITCVLKGEQVWVLGAER
        ++ SSKDM N CKEKFGD+L+  +ITSI CV KGEQVWV G ER
Subjt:  ERLSSKDMTNGCKEKFGDKLHFDEITSITCVLKGEQVWVLGAER

KAA0032002.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]3.2e-0957.63Show/hide
Query:  LLERLSSKDMTNGCKEKFGDKLHFDEITSITCVLKGEQVWVLGAERFSPLKEKYYKSYK
        L+ER SSKD+ N C+E+FGD LHF +ITSI C  +  QVW +GAER   L EK+Y  YK
Subjt:  LLERLSSKDMTNGCKEKFGDKLHFDEITSITCVLKGEQVWVLGAERFSPLKEKYYKSYK

TYK07860.1 uncharacterized protein E5676_scaffold1933G00010 [Cucumis melo var. makuwa]4.1e-2078.79Show/hide
Query:  MASACRQLLERLSSKDMTNGCKEKFGDKLHFDEITSITCVLKGEQVWVLGAERFSPLKEKYYKSYK
        MA ACRQLLER++SKDM N CKE+F   LH DEITSITCV KGEQVWVL AER  PLKEKYYKSYK
Subjt:  MASACRQLLERLSSKDMTNGCKEKFGDKLHFDEITSITCVLKGEQVWVLGAERFSPLKEKYYKSYK

TrEMBL top hitse value%identityAlignment
A0A5D3C951 Uncharacterized protein2.0e-2078.79Show/hide
Query:  MASACRQLLERLSSKDMTNGCKEKFGDKLHFDEITSITCVLKGEQVWVLGAERFSPLKEKYYKSYK
        MA ACRQLLER++SKDM N CKE+F   LH DEITSITCV KGEQVWVL AER  PLKEKYYKSYK
Subjt:  MASACRQLLERLSSKDMTNGCKEKFGDKLHFDEITSITCVLKGEQVWVLGAERFSPLKEKYYKSYK

A0A5D3CY29 Transposon Ty3-I Gag-Pol polyprotein1.6e-0957.63Show/hide
Query:  LLERLSSKDMTNGCKEKFGDKLHFDEITSITCVLKGEQVWVLGAERFSPLKEKYYKSYK
        L+ER SSKD+ N C+E+FGD LHF +ITSI C  +  QVW +GAER   L EK+Y  YK
Subjt:  LLERLSSKDMTNGCKEKFGDKLHFDEITSITCVLKGEQVWVLGAERFSPLKEKYYKSYK

A0A5D3DDG5 Cytochrome b561 and DOMON domain-containing protein1.0e-0868.18Show/hide
Query:  ERLSSKDMTNGCKEKFGDKLHFDEITSITCVLKGEQVWVLGAER
        ++ SSKDM N CKEKFGD+L+  +ITSI CV KGEQVWV G ER
Subjt:  ERLSSKDMTNGCKEKFGDKLHFDEITSITCVLKGEQVWVLGAER

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAGTGCTTGTCGCCAACTACTCGAGAGACTAAGTAGCAAGGACATGACTAACGGGTGCAAAGAGAAGTTTGGAGATAAACTCCACTTTGACGAGATAACTTCTAT
CACTTGTGTCTTGAAAGGAGAACAAGTGTGGGTACTTGGTGCCGAGAGGTTTTCACCCTTAAAAGAGAAGTACTATAAGTCTTATAAGACTCTTAGATTTATATTGCTTA
ATGAAGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCAGTGCTTGTCGCCAACTACTCGAGAGACTAAGTAGCAAGGACATGACTAACGGGTGCAAAGAGAAGTTTGGAGATAAACTCCACTTTGACGAGATAACTTCTAT
CACTTGTGTCTTGAAAGGAGAACAAGTGTGGGTACTTGGTGCCGAGAGGTTTTCACCCTTAAAAGAGAAGTACTATAAGTCTTATAAGACTCTTAGATTTATATTGCTTA
ATGAAGCTTAG
Protein sequenceShow/hide protein sequence
MASACRQLLERLSSKDMTNGCKEKFGDKLHFDEITSITCVLKGEQVWVLGAERFSPLKEKYYKSYKTLRFILLNEA