CuGenDBv2

Gene ID	MELO3C018124
Organism	Cucumis melo DHL92 (Melon (DHL92) v4)
Description	Polycomb group protein
Genome location	chr04:10021721..10026267
RNA-Seq Expression	MELO3C018124
Synteny	MELO3C018124
Gene Ontology terms	GO:0000122 - negative regulation of transcription by RNA polymerase II (biological process) GO:0031507 - heterochromatin assembly (biological process) GO:0035098 - ESC/E(Z) complex (cellular component) GO:0005515 - protein binding (molecular function) GO:0031491 - nucleosome binding (molecular function)
InterPro domains	IPR015943 - WD40/YVTN repeat-like-containing domain superfamily IPR036322 - WD40-repeat-containing domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAE8650687.1 hypothetical protein Csa_011025 [Cucumis sativus]

4.6e-64

100

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Query:  MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCSRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTVDILQKYPVPECDIWF
        MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCSRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTVDILQKYPVPECDIWF
Subjt:  MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCSRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTVDILQKYPVPECDIWF

Query:  IKFSCDFHYNAAAIGN
        IKFSCDFHYNAAAIGN
Subjt:  IKFSCDFHYNAAAIGN

POO00471.1 Guanine nucleotide-binding protein, beta subunit [Trema orientale]

3.5e-64

97.46

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Query:  MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCSRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTVDILQKYPVPECDIWF
        MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDC+RWLGDF+LSKSVDNEIVLWEPKMKEQSPGEGTVDILQKYPVPECDIWF
Subjt:  MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCSRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTVDILQKYPVPECDIWF

Query:  IKFSCDFHYNAAAIGNSI
        IKFSCDFHYNAAAIGN+I
Subjt:  IKFSCDFHYNAAAIGNSI

XP_004151960.2 LOW QUALITY PROTEIN: polycomb group protein FIE1 [Cucumis sativus]

4.6e-64

100

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Query:  MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCSRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTVDILQKYPVPECDIWF
        MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCSRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTVDILQKYPVPECDIWF
Subjt:  MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCSRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTVDILQKYPVPECDIWF

Query:  IKFSCDFHYNAAAIGN
        IKFSCDFHYNAAAIGN
Subjt:  IKFSCDFHYNAAAIGN

XP_008454560.1 PREDICTED: polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM [Cucumis melo]

4.6e-64

100

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Query:  MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCSRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTVDILQKYPVPECDIWF
        MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCSRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTVDILQKYPVPECDIWF
Subjt:  MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCSRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTVDILQKYPVPECDIWF

Query:  IKFSCDFHYNAAAIGN
        IKFSCDFHYNAAAIGN
Subjt:  IKFSCDFHYNAAAIGN

XP_022935834.1 polycomb group protein FIE2 [Cucurbita moschata]

4.6e-64

100

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Query:  MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCSRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTVDILQKYPVPECDIWF
        MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCSRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTVDILQKYPVPECDIWF
Subjt:  MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCSRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTVDILQKYPVPECDIWF

Query:  IKFSCDFHYNAAAIGN
        IKFSCDFHYNAAAIGN
Subjt:  IKFSCDFHYNAAAIGN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LAJ8 WD_REPEATS_REGION domain-containing protein

2.2e-64

100

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Query:  MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCSRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTVDILQKYPVPECDIWF
        MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCSRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTVDILQKYPVPECDIWF
Subjt:  MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCSRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTVDILQKYPVPECDIWF

Query:  IKFSCDFHYNAAAIGN
        IKFSCDFHYNAAAIGN
Subjt:  IKFSCDFHYNAAAIGN

A0A2P5FRS2 Guanine nucleotide-binding protein, beta subunit

1.7e-64

97.46

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Query:  MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCSRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTVDILQKYPVPECDIWF
        MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDC+RWLGDF+LSKSVDNEIVLWEPKMKEQSPGEGTVDILQKYPVPECDIWF
Subjt:  MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCSRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTVDILQKYPVPECDIWF

Query:  IKFSCDFHYNAAAIGNSI
        IKFSCDFHYNAAAIGN+I
Subjt:  IKFSCDFHYNAAAIGNSI

A0A5D3BF55 Polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM

2.2e-64

100

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Query:  MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCSRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTVDILQKYPVPECDIWF
        MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCSRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTVDILQKYPVPECDIWF
Subjt:  MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCSRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTVDILQKYPVPECDIWF

Query:  IKFSCDFHYNAAAIGN
        IKFSCDFHYNAAAIGN
Subjt:  IKFSCDFHYNAAAIGN

A0A6J1F6J5 polycomb group protein FIE2

2.2e-64

100

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Query:  MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCSRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTVDILQKYPVPECDIWF
        MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCSRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTVDILQKYPVPECDIWF
Subjt:  MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCSRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTVDILQKYPVPECDIWF

Query:  IKFSCDFHYNAAAIGN
        IKFSCDFHYNAAAIGN
Subjt:  IKFSCDFHYNAAAIGN

A0A6J1IMF2 polycomb group protein FIE2

2.2e-64

100

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Query:  MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCSRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTVDILQKYPVPECDIWF
        MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCSRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTVDILQKYPVPECDIWF
Subjt:  MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCSRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTVDILQKYPVPECDIWF

Query:  IKFSCDFHYNAAAIGN
        IKFSCDFHYNAAAIGN
Subjt:  IKFSCDFHYNAAAIGN

SwissProt top hits

e value

%identity

Alignment

Q6ZJW8 Polycomb group protein FIE1

1.1e-52

Show/hide

Query:  MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCSRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTVDILQKYPVPECDIWF
        MDNTV+IWSMKEFW YVEKS++WTD  SKFPTK+VQFPV  A +HSNYVDC++WLGDF+LSKSV+NEI+LWE   KE++PGEG +D+LQKYPVPEC+IWF
Subjt:  MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCSRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTVDILQKYPVPECDIWF

Query:  IKFSCDFHYNAAAIGN
        +KFSCDFH+N  AIGN
Subjt:  IKFSCDFHYNAAAIGN

Q6ZJX0 Polycomb group protein FIE1

5.0e-61

89.66

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Query:  MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCSRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTVDILQKYPVPECDIWF
        MDNTVKIWSMKEFW YVE+SFTWTDLPSKFPTKYVQFPV +A VHSNYVDC+RWLGDFILSKSVDNEIVLWEPK KEQSPGEG++DILQKYPVPECDIWF
Subjt:  MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCSRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTVDILQKYPVPECDIWF

Query:  IKFSCDFHYNAAAIGN
        IKFSCDFH+N  AIGN
Subjt:  IKFSCDFHYNAAAIGN

Q8VZY6 Polycomb group protein FIE2

8.5e-61

88.79

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Query:  MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCSRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTVDILQKYPVPECDIWF
        MDNTVKIWSMKEFW YV+KS++WTDLPSKFPTKYVQFPV IA+VHSNYVDC+RWLGDFILSKSVDNEIVLWEPK KEQSPGEG++DILQKYPVPECDIWF
Subjt:  MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCSRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTVDILQKYPVPECDIWF

Query:  IKFSCDFHYNAAAIGN
        IKFSCDFH+N  AIGN
Subjt:  IKFSCDFHYNAAAIGN

Q8VZY7 Polycomb group protein FIE1

1.2e-49

71.79

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Query:  MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCSRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTVDILQKYPVPECDIWF
        MDNTVKIWSMKEFW YVEKS++WT  PSKFPT+ +QFPV  A+VHS+YVDC+RWLGDFILSKSV N ++LWEPK  ++ PGEG+VD+LQKYPVP+C +WF
Subjt:  MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCSRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTVDILQKYPVPECDIWF

Query:  IKFSCDFHYNAAAIGNS
        +KFSCDF+ N  AIGN+
Subjt:  IKFSCDFHYNAAAIGNS

Q9LT47 Polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM

9.1e-55

79.31

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Query:  MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCSRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTVDILQKYPVPECDIWF
        MD T+KIWSMKEFWTYVEKSFTWTD PSKFPTK+VQFPVF AS+H+NYVDC+RW GDFILSKSVDNEI+LWEP++KE SPGEG  D+L +YPVP CDIWF
Subjt:  MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCSRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTVDILQKYPVPECDIWF

Query:  IKFSCDFHYNAAAIGN
        IKFSCD H ++ AIGN
Subjt:  IKFSCDFHYNAAAIGN

Arabidopsis top hits

e value

%identity

Alignment

AT3G20740.1 Transducin/WD40 repeat-like superfamily protein

6.5e-56

79.31

Show/hide

Query:  MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCSRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTVDILQKYPVPECDIWF
        MD T+KIWSMKEFWTYVEKSFTWTD PSKFPTK+VQFPVF AS+H+NYVDC+RW GDFILSKSVDNEI+LWEP++KE SPGEG  D+L +YPVP CDIWF
Subjt:  MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCSRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTVDILQKYPVPECDIWF

Query:  IKFSCDFHYNAAAIGN
        IKFSCD H ++ AIGN
Subjt:  IKFSCDFHYNAAAIGN

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGACAACACTGTAAAAATTTGGTCAATGAAAGAGTTCTGGACATACGTGGAAAAATCTTTTACCTGGACAGATCTTCCATCAAAGTTTCCCACCAAGTATGTCCAGTT
TCCAGTGTTCATAGCATCAGTTCATTCAAATTATGTTGATTGCAGTAGGTGGCTCGGTGATTTTATTCTTTCAAAGAGTGTTGACAATGAGATTGTGTTATGGGAACCAA
AAATGAAGGAACAGTCACCTGGAGAGGGTACTGTGGATATTCTTCAGAAGTATCCTGTTCCTGAGTGTGATATTTGGTTTATCAAGTTTTCCTGTGATTTTCATTATAAT
GCAGCTGCTATAGGTAATTCCATCTCATGCCTAGCAACCAATTCATGCCAAGGCATTGCAACATAG

mRNA sequence

Show/hide mRNA sequence

GAATTCATTTAGGCAGTGAAGATGAAGTTTTTAGTTTGCGATGCAGTTTTTACTTTACTGAAAAGTCACCACTTTTGCCTATCTTCTTCTTGCTGCCCGCTTAACTAAAC
TCTCCGTCCCTGTCTCTGGCATTTCCCGCTCATGGCAAAATACGCTTTAGGGTCTGAACCAGTGGTGGGTTGTTAACGCCATCGAAGAAGAAGGAATATAGGGTCACCAA
CCGCCTTCAAGAGGGGAAAAGGCCTCTTTATGCTGTAGTTTTCAACTTCATCGACTCTCGATACTTCAATGTCTTTGCCACTGTTGGCGGCAATCGGATTACAGTTTACC
AATGTCTTGAAGGGGGTGTTATAGCCGTGTTGCAGTCTTACGTCGATGAAGATAAGGATGAATCTTTTTACACTGTAAGCTGGGCTTACAACGTCGATGGCTCCCCTTTT
GTTGTTGCTGGTGGAATCAATGGTATAATCCGTGTTATTGATGCTGGCAGTGAAAAGATATATAAGAGTTTTGTCGGTCATGGTGATTCAATAAATGAAATCAGGACTCA
GCCACTGAAGCCGTCGCTTGTGATCTCTGCAAGTAAAGATGAGTCTGTTCGATTATGGAATGTTCATACAGGTATTTGCATTTTGGTATTTGCTGGTGCAGGTGGTCATC
GTAATGAGGTCTTAAGTGTGGATTTTCATCCATCAGATATTTATCGCATTGCTAGCTGTGGAATGGACAACACTGTAAAAATTTGGTCAATGAAAGAGTTCTGGACATAC
GTGGAAAAATCTTTTACCTGGACAGATCTTCCATCAAAGTTTCCCACCAAGTATGTCCAGTTTCCAGTGTTCATAGCATCAGTTCATTCAAATTATGTTGATTGCAGTAG
GTGGCTCGGTGATTTTATTCTTTCAAAGAGTGTTGACAATGAGATTGTGTTATGGGAACCAAAAATGAAGGAACAGTCACCTGGAGAGGGTACTGTGGATATTCTTCAGA
AGTATCCTGTTCCTGAGTGTGATATTTGGTTTATCAAGTTTTCCTGTGATTTTCATTATAATGCAGCTGCTATAGGTAATTCCATCTCATGCCTAGCAACCAATTCATGC
CAAGGCATTGCAACATAGTCCTTGTAAATCCTAATTACCAATTGATCAATTGAGATCTCGCTGTTTCTATTCTTTGCACACCAGGAAACAGGGAAGGAAAAATTTTTGTT
TGGGAACTTCAGTCAAGCCCCCCAGCTCTCATTGCAAGGTTGTCTCATGCCCAGTCGAAGTCTCCCATCAGACAGACAGCCATGTCCTTTGATGGAAGTATAATTTTGAG
TTGCTGTGAAGATGGGACAATTTGGCGCTGGGATGCTGTGACAACCACTTGAGCCATTTAGAGCATGTACAGATAACTTCATCAAATATTATTTTTCTTCTAATCAGTAA
TTAGTCATTTTCTTTCAGCATTACTATATCACATTATGGAAGGTAGAAACCGAACTAACCTGCATATGAAATTTTCTTTTTCAATTTTTAACTGAATTTATT

Protein sequence

Show/hide protein sequence

MDNTVKIWSMKEFWTYVEKSFTWTDLPSKFPTKYVQFPVFIASVHSNYVDCSRWLGDFILSKSVDNEIVLWEPKMKEQSPGEGTVDILQKYPVPECDIWFIKFSCDFHYN
AAAIGNSISCLATNSCQGIAT

MELO3C018124 (gene) of Melon (DHL92) v4 genome