; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C018191 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C018191
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionGag/pol protein
Genome locationchr04:8502030..8502686
RNA-Seq ExpressionMELO3C018191
SyntenyMELO3C018191
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036773.1 uncharacterized protein E6C27_scaffold20G00570 [Cucumis melo var. makuwa]4.0e-113100Show/hide
Query:  MLMKLQYLNLNMHGVQMRSYRFKSTPPRRPYRLSSEKSQVNVSASSHLPVNDEVIVESTTKGAETAPSVSETHTTDMDNRFVLAKSVNPNIFIYSHESSS
        MLMKLQYLNLNMHGVQMRSYRFKSTPPRRPYRLSSEKSQVNVSASSHLPVNDEVIVESTTKGAETAPSVSETHTTDMDNRFVLAKSVNPNIFIYSHESSS
Subjt:  MLMKLQYLNLNMHGVQMRSYRFKSTPPRRPYRLSSEKSQVNVSASSHLPVNDEVIVESTTKGAETAPSVSETHTTDMDNRFVLAKSVNPNIFIYSHESSS

Query:  FEDVFAPTPGHPPTTNVEAGPSRRSPPIQSSIQVDASVTNQSSVSKHNPIDKSTENVGRNDVHVVESPAAAESPAANEHVDPTDTCATNTVELDVNDELQ
        FEDVFAPTPGHPPTTNVEAGPSRRSPPIQSSIQVDASVTNQSSVSKHNPIDKSTENVGRNDVHVVESPAAAESPAANEHVDPTDTCATNTVELDVNDELQ
Subjt:  FEDVFAPTPGHPPTTNVEAGPSRRSPPIQSSIQVDASVTNQSSVSKHNPIDKSTENVGRNDVHVVESPAAAESPAANEHVDPTDTCATNTVELDVNDELQ

Query:  LETQQSPGVSRPKGKKVQ
        LETQQSPGVSRPKGKKVQ
Subjt:  LETQQSPGVSRPKGKKVQ

KAA0048750.1 uncharacterized protein E6C27_scaffold43G00540 [Cucumis melo var. makuwa]8.5e-6364.44Show/hide
Query:  NMHGVQMRSYRFKSTPPRRPYRLSSEKSQVNVSASSHLPVNDEVIVESTTKGAETAPSVSETHTTDMD------------------NRFVLAKSVNPNIF
        NM+GV MR + FKST PRRPYRL SEKSQVNVS  S LPVNDEVI+E T K  ETAPSV +THTT MD                  +  V AKS + ++ 
Subjt:  NMHGVQMRSYRFKSTPPRRPYRLSSEKSQVNVSASSHLPVNDEVIVESTTKGAETAPSVSETHTTDMD------------------NRFVLAKSVNPNIF

Query:  IYSHESSSFEDVFAPTPGHPPTTNVEAGPSRRSPPIQSSIQVDASVTNQSSVSKHNPIDKSTENVGRNDVHVVESPAAAESPAANEHVDPTDTCATNTVE
         + HES S +DVF PTPGH PTTN EA P  RSP +QSSIQVD SVTNQ  V +HNP+D+ST+ VGRNDV VV+SP AA S A +EHV PTDTCATNTVE
Subjt:  IYSHESSSFEDVFAPTPGHPPTTNVEAGPSRRSPPIQSSIQVDASVTNQSSVSKHNPIDKSTENVGRNDVHVVESPAAAESPAANEHVDPTDTCATNTVE

Query:  LDVNDELQLETQQSPGVSRPKGKKV
        LDVNDELQ ETQQS GVSRP GKKV
Subjt:  LDVNDELQLETQQSPGVSRPKGKKV

KAA0054676.1 uncharacterized protein E6C27_scaffold24G004970 [Cucumis melo var. makuwa]1.0e-3150.54Show/hide
Query:  NMHGVQMRSYRFKSTPPRRPYRLSSEKSQVNVSASSHLPVNDEVIVESTTKGAETAPSVSETHTTDMDNRFVLAKSVNPNIFIYSHESSSFEDVFAPTPG
        NMH V+MR   FKST  +R Y   SEK Q+N   SSHL V+DEVIVES  +  ETAP                         I+S+ESSS +D+F PT G
Subjt:  NMHGVQMRSYRFKSTPPRRPYRLSSEKSQVNVSASSHLPVNDEVIVESTTKGAETAPSVSETHTTDMDNRFVLAKSVNPNIFIYSHESSSFEDVFAPTPG

Query:  HPPTTNVEAGPSRRSPPIQSSIQVDASVTNQSSVSKHNPIDKSTENVGRNDVHVVESPAAAESPAANEHVDPTDTCATNTVELD
        HP  TN  AG SRRSPPI+SSIQVDASV +Q  V K +PID+STEN+G+ D    ++PA A++     HV+PT+TCAT+TVE D
Subjt:  HPPTTNVEAGPSRRSPPIQSSIQVDASVTNQSSVSKHNPIDKSTENVGRNDVHVVESPAAAESPAANEHVDPTDTCATNTVELD

KAA0065524.1 gag/pol protein [Cucumis melo var. makuwa]2.2e-5057.47Show/hide
Query:  QMRSYRFKSTPPRRPYRLSSEKSQVNVSASSHLPVNDEVIVESTTKGAETAPSVSETHTTDMD------------------NRFVLAKSVNPNIFIYSHE
        ++R   FKSTPPRRPYRL S+K QVNVS SS+L V+ E I E   +  ETAPSVSETHTT MD                  +  V AKS++P    +SHE
Subjt:  QMRSYRFKSTPPRRPYRLSSEKSQVNVSASSHLPVNDEVIVESTTKGAETAPSVSETHTTDMD------------------NRFVLAKSVNPNIFIYSHE

Query:  SSSFEDVFAPTPGHPPTTNVEAGPSRRSPPIQSSIQVDASVTNQSSVSKHNPIDKSTENVGRNDVHVVESPAAAESPAANEHVDPTDTCATNTVELDVND
        SSS++D+F PTP H PTTN  AG S  SP ++SSIQVDASVT+   V   NPIDK+TENVGRNDV V       ES   + HV+ T+TCAT+T+E DVND
Subjt:  SSSFEDVFAPTPGHPPTTNVEAGPSRRSPPIQSSIQVDASVTNQSSVSKHNPIDKSTENVGRNDVHVVESPAAAESPAANEHVDPTDTCATNTVELDVND

Query:  ELQLETQQSPGVSRPKGKKVQ
        ELQ ETQQSPGVSRPKGKK Q
Subjt:  ELQLETQQSPGVSRPKGKKVQ

TYK29294.1 gag/pol protein [Cucumis melo var. makuwa]2.2e-5058.6Show/hide
Query:  FKSTPPRRPYRLSSEKSQVNVSASSHLPVNDEVIVESTTKGAETAPSVSETHTTDMD------------------NRFVLAKSVNPNIFIYSHESSSFED
        FKSTPPRRPYRL S+K QVNVS SS+L V+ E I E   +  ETAPSVSETHTT MD                  +  V AKSV+P    +SHESSS++D
Subjt:  FKSTPPRRPYRLSSEKSQVNVSASSHLPVNDEVIVESTTKGAETAPSVSETHTTDMD------------------NRFVLAKSVNPNIFIYSHESSSFED

Query:  VFAPTPGHPPTTNVEAGPSRRSPPIQSSIQVDASVTNQSSVSKHNPIDKSTENVGRNDVHVVESPAAAESPAANEHVDPTDTCATNTVELDVNDELQLET
        +F PTP H PTTN  AG S  SP ++SSIQVDAS+T+   V   NPIDK+TENVGRNDV V       ES   + HV+ T+TCAT+T+E DVNDELQ ET
Subjt:  VFAPTPGHPPTTNVEAGPSRRSPPIQSSIQVDASVTNQSSVSKHNPIDKSTENVGRNDVHVVESPAAAESPAANEHVDPTDTCATNTVELDVNDELQLET

Query:  QQSPGVSRPKGKKVQ
        QQSPGVSRPKGKK Q
Subjt:  QQSPGVSRPKGKKVQ

TrEMBL top hitse value%identityAlignment
A0A5A7T1I3 Uncharacterized protein2.0e-113100Show/hide
Query:  MLMKLQYLNLNMHGVQMRSYRFKSTPPRRPYRLSSEKSQVNVSASSHLPVNDEVIVESTTKGAETAPSVSETHTTDMDNRFVLAKSVNPNIFIYSHESSS
        MLMKLQYLNLNMHGVQMRSYRFKSTPPRRPYRLSSEKSQVNVSASSHLPVNDEVIVESTTKGAETAPSVSETHTTDMDNRFVLAKSVNPNIFIYSHESSS
Subjt:  MLMKLQYLNLNMHGVQMRSYRFKSTPPRRPYRLSSEKSQVNVSASSHLPVNDEVIVESTTKGAETAPSVSETHTTDMDNRFVLAKSVNPNIFIYSHESSS

Query:  FEDVFAPTPGHPPTTNVEAGPSRRSPPIQSSIQVDASVTNQSSVSKHNPIDKSTENVGRNDVHVVESPAAAESPAANEHVDPTDTCATNTVELDVNDELQ
        FEDVFAPTPGHPPTTNVEAGPSRRSPPIQSSIQVDASVTNQSSVSKHNPIDKSTENVGRNDVHVVESPAAAESPAANEHVDPTDTCATNTVELDVNDELQ
Subjt:  FEDVFAPTPGHPPTTNVEAGPSRRSPPIQSSIQVDASVTNQSSVSKHNPIDKSTENVGRNDVHVVESPAAAESPAANEHVDPTDTCATNTVELDVNDELQ

Query:  LETQQSPGVSRPKGKKVQ
        LETQQSPGVSRPKGKKVQ
Subjt:  LETQQSPGVSRPKGKKVQ

A0A5A7VE22 Gag/pol protein1.1e-5057.47Show/hide
Query:  QMRSYRFKSTPPRRPYRLSSEKSQVNVSASSHLPVNDEVIVESTTKGAETAPSVSETHTTDMD------------------NRFVLAKSVNPNIFIYSHE
        ++R   FKSTPPRRPYRL S+K QVNVS SS+L V+ E I E   +  ETAPSVSETHTT MD                  +  V AKS++P    +SHE
Subjt:  QMRSYRFKSTPPRRPYRLSSEKSQVNVSASSHLPVNDEVIVESTTKGAETAPSVSETHTTDMD------------------NRFVLAKSVNPNIFIYSHE

Query:  SSSFEDVFAPTPGHPPTTNVEAGPSRRSPPIQSSIQVDASVTNQSSVSKHNPIDKSTENVGRNDVHVVESPAAAESPAANEHVDPTDTCATNTVELDVND
        SSS++D+F PTP H PTTN  AG S  SP ++SSIQVDASVT+   V   NPIDK+TENVGRNDV V       ES   + HV+ T+TCAT+T+E DVND
Subjt:  SSSFEDVFAPTPGHPPTTNVEAGPSRRSPPIQSSIQVDASVTNQSSVSKHNPIDKSTENVGRNDVHVVESPAAAESPAANEHVDPTDTCATNTVELDVND

Query:  ELQLETQQSPGVSRPKGKKVQ
        ELQ ETQQSPGVSRPKGKK Q
Subjt:  ELQLETQQSPGVSRPKGKKVQ

A0A5D3CAN5 Uncharacterized protein4.9e-3250.54Show/hide
Query:  NMHGVQMRSYRFKSTPPRRPYRLSSEKSQVNVSASSHLPVNDEVIVESTTKGAETAPSVSETHTTDMDNRFVLAKSVNPNIFIYSHESSSFEDVFAPTPG
        NMH V+MR   FKST  +R Y   SEK Q+N   SSHL V+DEVIVES  +  ETAP                         I+S+ESSS +D+F PT G
Subjt:  NMHGVQMRSYRFKSTPPRRPYRLSSEKSQVNVSASSHLPVNDEVIVESTTKGAETAPSVSETHTTDMDNRFVLAKSVNPNIFIYSHESSSFEDVFAPTPG

Query:  HPPTTNVEAGPSRRSPPIQSSIQVDASVTNQSSVSKHNPIDKSTENVGRNDVHVVESPAAAESPAANEHVDPTDTCATNTVELD
        HP  TN  AG SRRSPPI+SSIQVDASV +Q  V K +PID+STEN+G+ D    ++PA A++     HV+PT+TCAT+TVE D
Subjt:  HPPTTNVEAGPSRRSPPIQSSIQVDASVTNQSSVSKHNPIDKSTENVGRNDVHVVESPAAAESPAANEHVDPTDTCATNTVELD

A0A5D3E0G7 Gag/pol protein1.1e-5058.6Show/hide
Query:  FKSTPPRRPYRLSSEKSQVNVSASSHLPVNDEVIVESTTKGAETAPSVSETHTTDMD------------------NRFVLAKSVNPNIFIYSHESSSFED
        FKSTPPRRPYRL S+K QVNVS SS+L V+ E I E   +  ETAPSVSETHTT MD                  +  V AKSV+P    +SHESSS++D
Subjt:  FKSTPPRRPYRLSSEKSQVNVSASSHLPVNDEVIVESTTKGAETAPSVSETHTTDMD------------------NRFVLAKSVNPNIFIYSHESSSFED

Query:  VFAPTPGHPPTTNVEAGPSRRSPPIQSSIQVDASVTNQSSVSKHNPIDKSTENVGRNDVHVVESPAAAESPAANEHVDPTDTCATNTVELDVNDELQLET
        +F PTP H PTTN  AG S  SP ++SSIQVDAS+T+   V   NPIDK+TENVGRNDV V       ES   + HV+ T+TCAT+T+E DVNDELQ ET
Subjt:  VFAPTPGHPPTTNVEAGPSRRSPPIQSSIQVDASVTNQSSVSKHNPIDKSTENVGRNDVHVVESPAAAESPAANEHVDPTDTCATNTVELDVNDELQLET

Query:  QQSPGVSRPKGKKVQ
        QQSPGVSRPKGKK Q
Subjt:  QQSPGVSRPKGKKVQ

A0A5D3E8I4 Uncharacterized protein4.1e-6364.44Show/hide
Query:  NMHGVQMRSYRFKSTPPRRPYRLSSEKSQVNVSASSHLPVNDEVIVESTTKGAETAPSVSETHTTDMD------------------NRFVLAKSVNPNIF
        NM+GV MR + FKST PRRPYRL SEKSQVNVS  S LPVNDEVI+E T K  ETAPSV +THTT MD                  +  V AKS + ++ 
Subjt:  NMHGVQMRSYRFKSTPPRRPYRLSSEKSQVNVSASSHLPVNDEVIVESTTKGAETAPSVSETHTTDMD------------------NRFVLAKSVNPNIF

Query:  IYSHESSSFEDVFAPTPGHPPTTNVEAGPSRRSPPIQSSIQVDASVTNQSSVSKHNPIDKSTENVGRNDVHVVESPAAAESPAANEHVDPTDTCATNTVE
         + HES S +DVF PTPGH PTTN EA P  RSP +QSSIQVD SVTNQ  V +HNP+D+ST+ VGRNDV VV+SP AA S A +EHV PTDTCATNTVE
Subjt:  IYSHESSSFEDVFAPTPGHPPTTNVEAGPSRRSPPIQSSIQVDASVTNQSSVSKHNPIDKSTENVGRNDVHVVESPAAAESPAANEHVDPTDTCATNTVE

Query:  LDVNDELQLETQQSPGVSRPKGKKV
        LDVNDELQ ETQQS GVSRP GKKV
Subjt:  LDVNDELQLETQQSPGVSRPKGKKV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAATGAAGCTCCAGTATCTCAATCTTAATATGCATGGTGTACAGATGAGGAGTTATCGGTTCAAAAGCACTCCTCCACGGAGACCGTATCGACTTTCATCAGAGAA
ATCTCAGGTAAATGTCTCTGCAAGTTCCCATTTACCTGTGAATGATGAGGTTATTGTTGAAAGTACTACAAAGGGTGCTGAAACTGCACCAAGTGTCTCTGAGACTCACA
CTACCGATATGGACAACCGATTTGTCCTGGCTAAATCTGTTAATCCTAATATTTTTATTTATTCTCATGAGAGCTCCTCTTTTGAAGATGTGTTTGCTCCAACACCGGGT
CATCCGCCTACGACAAATGTTGAAGCTGGTCCATCACGTCGTTCACCACCGATTCAGTCATCAATTCAAGTTGATGCTTCTGTTACAAATCAGAGTTCAGTGTCTAAACA
TAATCCTATTGATAAATCTACTGAGAATGTGGGAAGGAATGATGTTCATGTTGTTGAGTCTCCGGCTGCTGCTGAGTCTCCTGCTGCTAATGAACATGTCGACCCGACTG
ATACTTGTGCAACCAATACTGTTGAACTAGATGTTAATGATGAACTCCAACTAGAGACTCAACAATCACCTGGTGTATCTAGGCCAAAGGGAAAGAAGGTTCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTTAATGAAGCTCCAGTATCTCAATCTTAATATGCATGGTGTACAGATGAGGAGTTATCGGTTCAAAAGCACTCCTCCACGGAGACCGTATCGACTTTCATCAGAGAA
ATCTCAGGTAAATGTCTCTGCAAGTTCCCATTTACCTGTGAATGATGAGGTTATTGTTGAAAGTACTACAAAGGGTGCTGAAACTGCACCAAGTGTCTCTGAGACTCACA
CTACCGATATGGACAACCGATTTGTCCTGGCTAAATCTGTTAATCCTAATATTTTTATTTATTCTCATGAGAGCTCCTCTTTTGAAGATGTGTTTGCTCCAACACCGGGT
CATCCGCCTACGACAAATGTTGAAGCTGGTCCATCACGTCGTTCACCACCGATTCAGTCATCAATTCAAGTTGATGCTTCTGTTACAAATCAGAGTTCAGTGTCTAAACA
TAATCCTATTGATAAATCTACTGAGAATGTGGGAAGGAATGATGTTCATGTTGTTGAGTCTCCGGCTGCTGCTGAGTCTCCTGCTGCTAATGAACATGTCGACCCGACTG
ATACTTGTGCAACCAATACTGTTGAACTAGATGTTAATGATGAACTCCAACTAGAGACTCAACAATCACCTGGTGTATCTAGGCCAAAGGGAAAGAAGGTTCAATAA
Protein sequenceShow/hide protein sequence
MLMKLQYLNLNMHGVQMRSYRFKSTPPRRPYRLSSEKSQVNVSASSHLPVNDEVIVESTTKGAETAPSVSETHTTDMDNRFVLAKSVNPNIFIYSHESSSFEDVFAPTPG
HPPTTNVEAGPSRRSPPIQSSIQVDASVTNQSSVSKHNPIDKSTENVGRNDVHVVESPAAAESPAANEHVDPTDTCATNTVELDVNDELQLETQQSPGVSRPKGKKVQ