; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C018281 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C018281
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionReverse transcriptase
Genome locationchr10:20228201..20235549
RNA-Seq ExpressionMELO3C018281
SyntenyMELO3C018281
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033241.1 hypothetical protein E6C27_scaffold845G00350 [Cucumis melo var. makuwa]4.3e-0566.67Show/hide
Query:  IPLLTLSELHDNDAVVSAGHAPLRERRWECWVGPTT
        + LLTL+ L DNDA+VSAG  PLR+R+WECW  PTT
Subjt:  IPLLTLSELHDNDAVVSAGHAPLRERRWECWVGPTT

KAA0037581.1 reverse transcriptase [Cucumis melo var. makuwa]2.7e-0758.82Show/hide
Query:  LIPLLTLSELHDNDAVVSAGHAPLRERRWECWVGPTTCRACKRCCTGCTLHNVEIEFLVPDRLPVSLD
        + PL TLS L DNDAVVSAG APLR+RRWEC  GPTT    K   T      VEIE  VPD LP S +
Subjt:  LIPLLTLSELHDNDAVVSAGHAPLRERRWECWVGPTTCRACKRCCTGCTLHNVEIEFLVPDRLPVSLD

KAA0046202.1 hypothetical protein E6C27_scaffold376G00770 [Cucumis melo var. makuwa]1.3e-0648.94Show/hide
Query:  CITRNACGLMILVVELVVEISYLKICSPSSISKKTCLS--RSEVSKILKPLLGLPKTQSTYQNRCKGPEQADSSKTDESARLESKIQLGLWQEG
        CITRNAC LMILVVELVVEISYL+ICS    SKK  LS  R + +++ K                            ESARLES+I+LGL QEG
Subjt:  CITRNACGLMILVVELVVEISYLKICSPSSISKKTCLS--RSEVSKILKPLLGLPKTQSTYQNRCKGPEQADSSKTDESARLESKIQLGLWQEG

KAA0065872.1 hypothetical protein E6C27_scaffold538G00420 [Cucumis melo var. makuwa]2.1e-0437.78Show/hide
Query:  NDPTPYSELKPLLNTNKSSTCITRNACGLMILVVELVVEISYLKICSPSSISKKTCLSRSEVSKILKPL---LGLPKTQSTYQNRCKGPEQADSSKTDES
        N P P   LK +   +    CITRNACGLM+LVVE+VVEISYL+ICS S  SKK  L +    K L      L   +T+S  +++    +Q  S     S
Subjt:  NDPTPYSELKPLLNTNKSSTCITRNACGLMILVVELVVEISYLKICSPSSISKKTCLSRSEVSKILKPL---LGLPKTQSTYQNRCKGPEQADSSKTDES

Query:  ARLES-KIQLGLWQEGDAVWLGIGLQRRVRARVHA
        A  E   +   L ++G A      L    +AR+ A
Subjt:  ARLES-KIQLGLWQEGDAVWLGIGLQRRVRARVHA

TYK03091.1 reverse transcriptase [Cucumis melo var. makuwa]2.7e-0758.82Show/hide
Query:  LIPLLTLSELHDNDAVVSAGHAPLRERRWECWVGPTTCRACKRCCTGCTLHNVEIEFLVPDRLPVSLD
        + PL TLS L DNDAVVSAG APLR+RRWEC  GPTT    K   T      VEIE  VPD LP S +
Subjt:  LIPLLTLSELHDNDAVVSAGHAPLRERRWECWVGPTTCRACKRCCTGCTLHNVEIEFLVPDRLPVSLD

TrEMBL top hitse value%identityAlignment
A0A5A7SUV2 Uncharacterized protein2.1e-0566.67Show/hide
Query:  IPLLTLSELHDNDAVVSAGHAPLRERRWECWVGPTT
        + LLTL+ L DNDA+VSAG  PLR+R+WECW  PTT
Subjt:  IPLLTLSELHDNDAVVSAGHAPLRERRWECWVGPTT

A0A5A7T7M6 Reverse transcriptase1.3e-0758.82Show/hide
Query:  LIPLLTLSELHDNDAVVSAGHAPLRERRWECWVGPTTCRACKRCCTGCTLHNVEIEFLVPDRLPVSLD
        + PL TLS L DNDAVVSAG APLR+RRWEC  GPTT    K   T      VEIE  VPD LP S +
Subjt:  LIPLLTLSELHDNDAVVSAGHAPLRERRWECWVGPTTCRACKRCCTGCTLHNVEIEFLVPDRLPVSLD

A0A5A7TS17 Uncharacterized protein6.5e-0748.94Show/hide
Query:  CITRNACGLMILVVELVVEISYLKICSPSSISKKTCLS--RSEVSKILKPLLGLPKTQSTYQNRCKGPEQADSSKTDESARLESKIQLGLWQEG
        CITRNAC LMILVVELVVEISYL+ICS    SKK  LS  R + +++ K                            ESARLES+I+LGL QEG
Subjt:  CITRNACGLMILVVELVVEISYLKICSPSSISKKTCLS--RSEVSKILKPLLGLPKTQSTYQNRCKGPEQADSSKTDESARLESKIQLGLWQEG

A0A5A7VC30 Uncharacterized protein1.0e-0437.78Show/hide
Query:  NDPTPYSELKPLLNTNKSSTCITRNACGLMILVVELVVEISYLKICSPSSISKKTCLSRSEVSKILKPL---LGLPKTQSTYQNRCKGPEQADSSKTDES
        N P P   LK +   +    CITRNACGLM+LVVE+VVEISYL+ICS S  SKK  L +    K L      L   +T+S  +++    +Q  S     S
Subjt:  NDPTPYSELKPLLNTNKSSTCITRNACGLMILVVELVVEISYLKICSPSSISKKTCLSRSEVSKILKPL---LGLPKTQSTYQNRCKGPEQADSSKTDES

Query:  ARLES-KIQLGLWQEGDAVWLGIGLQRRVRARVHA
        A  E   +   L ++G A      L    +AR+ A
Subjt:  ARLES-KIQLGLWQEGDAVWLGIGLQRRVRARVHA

A0A5D3BTP3 Reverse transcriptase1.3e-0758.82Show/hide
Query:  LIPLLTLSELHDNDAVVSAGHAPLRERRWECWVGPTTCRACKRCCTGCTLHNVEIEFLVPDRLPVSLD
        + PL TLS L DNDAVVSAG APLR+RRWEC  GPTT    K   T      VEIE  VPD LP S +
Subjt:  LIPLLTLSELHDNDAVVSAGHAPLRERRWECWVGPTTCRACKRCCTGCTLHNVEIEFLVPDRLPVSLD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCCACTTTCATGTCTCTACATGAACGATTCAGGATCACATCCTTGGACCTCACACGCCCCCTATAAACCTCGAACCTTAAGAAACTTGGGATTTCCAAAGCTAGC
CGTTTTGGGCCTTGTGGGCGGCCAAAAGAGGATGTGGCCAAAGAAAAGTAAGGATGTGTGGCCAAGATGGTTGGGAGAACCTCCAAGTGTGCTTGGAAAGGTGATCTTGG
CTAGGAGAGAAAGGTTGTCTTTAGAGGCATTTGGCTTGACGGTGGACACTGCTAGACAAGATAATGAAGAGGTGGAGTCGGTGCGTGCTTTACAGGTGTCATGTGCATGC
CTAGTGTTAATGGTTGGCCGATTGACAGGGTTACAAGACGACATGGTCATCAATTTTTGGTTCAAAGAGGATAGTTTGATGTTGTTGGGTGCGCAAAGCATAGGACAGCT
CAGGCCAGGTGACATAAAGCACGCATTAAGGCAAAGTAGAGGAAAGTTGAAAGGGCTTGGTAGAAGAGAAGGAGAACTCAAGCAAAAAGTGTATCCATGGCAGAATCTTG
GTTCATTTTGCGCATCACTGATTCCGTTGTTGACGTTGAGTGAACTCCACGACAACGATGCTGTCGTGAGTGCTGGGCATGCCCCACTACGAGAAAGACGATGGGAATGT
TGGGTGGGCCCCACTACATGTAGAGCTTGTAAACGTTGTTGTACTGGGTGTACCCTACACAACGTAGAGATCGAGTTCCTTGTGCCTGATCGATTGCCAGTGTCTTTAGA
TTTACTCGTGAAATCAGTTAATTTCGAGGACGTTAGAGATACTCAAAGTAATGTCGTATCTCGCATGGCAATTACTTTAGTGGATGAACTAGGTTTATCTATAACATCTT
TGGAAACTCGATTCAACACCAATTTACTACGTGGTTTGATGATTCTTGATGAGGTTTTCTGTAACGACCCAACTCCTTATTCTGAGTTGAAGCCATTACTAAACACAAAT
AAATCCTCAACGTGCATAACTAGGAATGCATGCGGTCTCATGATTCTAGTCGTAGAGCTAGTAGTAGAAATCTCTTACCTGAAGATTTGCTCACCGAGTTCTATCAGCAA
GAAAACATGCCTTTCACGCAGCGAGGTTTCAAAAATTCTTAAGCCTTTGCTGGGACTGCCGAAAACCCAATCCACTTACCAAAATAGGTGCAAAGGACCGGAGCAGGCTG
ACAGCTCAAAGACAGACGAATCGGCTCGACTAGAAAGCAAGATTCAGCTTGGCTTGTGGCAAGAGGGAGACGCGGTTTGGCTGGGAATCGGCTTGCAGAGAAGGGTGCGG
GCACGGGTGCACGCGGGTGCGGCTTGCACGCGGGCGCGACTTGTGGGTGTACGTGGCGGGACTTGCACGCGGGCGCGATGTGGAGCAGGTACAGGTAACGACGTGGAGCG
GCTGGATGCGTTTGACCGGCGGCGACGCGGAGCGGCTGGACACGCGACACGACTGTTCGGGTCGGGAACACGGATCGACTGCGGTTGCGGGTGGCGTGCGTTTCGCTCGG
GACTACTCGACTGGGGTAGGCGACGCCTCTCGGTTGTGCGACAGAAGCTACGACGAGCGGCTGGGCTGCGCGACTTCGCAACCCTCGACTCAGACGCGATGACTGGCGTG
GGGACGGACGATGGACCGGCAGGGCTCCACGTGATTGGCTTGGAGATGCAGCTGAGATCCGTACGTGATGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCTCCACTTTCATGTCTCTACATGAACGATTCAGGATCACATCCTTGGACCTCACACGCCCCCTATAAACCTCGAACCTTAAGAAACTTGGGATTTCCAAAGCTAGC
CGTTTTGGGCCTTGTGGGCGGCCAAAAGAGGATGTGGCCAAAGAAAAGTAAGGATGTGTGGCCAAGATGGTTGGGAGAACCTCCAAGTGTGCTTGGAAAGGTGATCTTGG
CTAGGAGAGAAAGGTTGTCTTTAGAGGCATTTGGCTTGACGGTGGACACTGCTAGACAAGATAATGAAGAGGTGGAGTCGGTGCGTGCTTTACAGGTGTCATGTGCATGC
CTAGTGTTAATGGTTGGCCGATTGACAGGGTTACAAGACGACATGGTCATCAATTTTTGGTTCAAAGAGGATAGTTTGATGTTGTTGGGTGCGCAAAGCATAGGACAGCT
CAGGCCAGGTGACATAAAGCACGCATTAAGGCAAAGTAGAGGAAAGTTGAAAGGGCTTGGTAGAAGAGAAGGAGAACTCAAGCAAAAAGTGTATCCATGGCAGAATCTTG
GTTCATTTTGCGCATCACTGATTCCGTTGTTGACGTTGAGTGAACTCCACGACAACGATGCTGTCGTGAGTGCTGGGCATGCCCCACTACGAGAAAGACGATGGGAATGT
TGGGTGGGCCCCACTACATGTAGAGCTTGTAAACGTTGTTGTACTGGGTGTACCCTACACAACGTAGAGATCGAGTTCCTTGTGCCTGATCGATTGCCAGTGTCTTTAGA
TTTACTCGTGAAATCAGTTAATTTCGAGGACGTTAGAGATACTCAAAGTAATGTCGTATCTCGCATGGCAATTACTTTAGTGGATGAACTAGGTTTATCTATAACATCTT
TGGAAACTCGATTCAACACCAATTTACTACGTGGTTTGATGATTCTTGATGAGGTTTTCTGTAACGACCCAACTCCTTATTCTGAGTTGAAGCCATTACTAAACACAAAT
AAATCCTCAACGTGCATAACTAGGAATGCATGCGGTCTCATGATTCTAGTCGTAGAGCTAGTAGTAGAAATCTCTTACCTGAAGATTTGCTCACCGAGTTCTATCAGCAA
GAAAACATGCCTTTCACGCAGCGAGGTTTCAAAAATTCTTAAGCCTTTGCTGGGACTGCCGAAAACCCAATCCACTTACCAAAATAGGTGCAAAGGACCGGAGCAGGCTG
ACAGCTCAAAGACAGACGAATCGGCTCGACTAGAAAGCAAGATTCAGCTTGGCTTGTGGCAAGAGGGAGACGCGGTTTGGCTGGGAATCGGCTTGCAGAGAAGGGTGCGG
GCACGGGTGCACGCGGGTGCGGCTTGCACGCGGGCGCGACTTGTGGGTGTACGTGGCGGGACTTGCACGCGGGCGCGATGTGGAGCAGGTACAGGTAACGACGTGGAGCG
GCTGGATGCGTTTGACCGGCGGCGACGCGGAGCGGCTGGACACGCGACACGACTGTTCGGGTCGGGAACACGGATCGACTGCGGTTGCGGGTGGCGTGCGTTTCGCTCGG
GACTACTCGACTGGGGTAGGCGACGCCTCTCGGTTGTGCGACAGAAGCTACGACGAGCGGCTGGGCTGCGCGACTTCGCAACCCTCGACTCAGACGCGATGACTGGCGTG
GGGACGGACGATGGACCGGCAGGGCTCCACGTGATTGGCTTGGAGATGCAGCTGAGATCCGTACGTGATGGCTAG
Protein sequenceShow/hide protein sequence
MPPLSCLYMNDSGSHPWTSHAPYKPRTLRNLGFPKLAVLGLVGGQKRMWPKKSKDVWPRWLGEPPSVLGKVILARRERLSLEAFGLTVDTARQDNEEVESVRALQVSCAC
LVLMVGRLTGLQDDMVINFWFKEDSLMLLGAQSIGQLRPGDIKHALRQSRGKLKGLGRREGELKQKVYPWQNLGSFCASLIPLLTLSELHDNDAVVSAGHAPLRERRWEC
WVGPTTCRACKRCCTGCTLHNVEIEFLVPDRLPVSLDLLVKSVNFEDVRDTQSNVVSRMAITLVDELGLSITSLETRFNTNLLRGLMILDEVFCNDPTPYSELKPLLNTN
KSSTCITRNACGLMILVVELVVEISYLKICSPSSISKKTCLSRSEVSKILKPLLGLPKTQSTYQNRCKGPEQADSSKTDESARLESKIQLGLWQEGDAVWLGIGLQRRVR
ARVHAGAACTRARLVGVRGGTCTRARCGAGTGNDVERLDAFDRRRRGAAGHATRLFGSGTRIDCGCGWRAFRSGLLDWGRRRLSVVRQKLRRAAGLRDFATLDSDAMTGV
GTDDGPAGLHVIGLEMQLRSVRDG