; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C018444 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C018444
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
Descriptionpentatricopeptide repeat-containing protein At2g15690
Genome locationchr01:344455..345296
RNA-Seq ExpressionMELO3C018444
SyntenyMELO3C018444
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031291.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]7.3e-9898.97Show/hide
Query:  MASLMAVRRVRTPITVSSFFKVRYPLSSSFTFTFRNQTETLIKTLSTSAIPSDFSNFPSSPQQPSSSSPPYRQPQWGSPSQVNPPSENFNRQSFSEFQNH
        MASLMAVRRVRTPITVSSFFKVRYPLSSSFTFTFRNQTETLIKTLSTSAIPSDFSNFPSSPQQPSSSSPPYRQPQWGSPSQVNPPSENFNRQSFSEFQNH
Subjt:  MASLMAVRRVRTPITVSSFFKVRYPLSSSFTFTFRNQTETLIKTLSTSAIPSDFSNFPSSPQQPSSSSPPYRQPQWGSPSQVNPPSENFNRQSFSEFQNH

Query:  DYAQQGTPSNQLNYRSQHQSPQPNPGFSREGQSYTQVGKTNSWNPPNQSYPQYQNPSQPNPPNQSYPQYQNPSQPNPPNQSYPQYQNPSQPNPPN
        DYAQQGTPSNQLNYRSQHQSPQPNPGFSREGQSYTQVGKTNSWNPPNQSYPQYQNPSQPNPPNQSYPQYQ PSQP+PPNQSYPQYQNPSQPNPPN
Subjt:  DYAQQGTPSNQLNYRSQHQSPQPNPGFSREGQSYTQVGKTNSWNPPNQSYPQYQNPSQPNPPNQSYPQYQNPSQPNPPNQSYPQYQNPSQPNPPN

KAE8645866.1 hypothetical protein Csa_017177 [Cucumis sativus]9.6e-8279.46Show/hide
Query:  MASLMAVRRVRTPITVSSFFKVRYPLSSSFTFTFRNQTETLIKTLSTSAIPSDFSNFPSSPQQPSSSSPPYRQPQWGSPSQVNPPSENFNRQSFSEFQNH
        MASLMAVRR RTPI VSS FKVRYPLSS FTFTFRNQTETLIKTLSTSAIP+DFSNFPSSPQQPSSSSP YRQPQWGSPSQVNPPSENFN QSFSEFQN 
Subjt:  MASLMAVRRVRTPITVSSFFKVRYPLSSSFTFTFRNQTETLIKTLSTSAIPSDFSNFPSSPQQPSSSSPPYRQPQWGSPSQVNPPSENFNRQSFSEFQNH

Query:  DYAQQGTPSNQLNYRSQHQSPQPNPGFSREGQSYTQVGKTNSWN-----------------------------PPNQSYPQYQNPSQPNPPNQSYPQYQN
        DYAQQG+  NQLNYRSQHQSPQPNPGFSR+GQSY+QVGKTNSWN                             PPNQSYPQYQNPSQ NPPNQSY QYQN
Subjt:  DYAQQGTPSNQLNYRSQHQSPQPNPGFSREGQSYTQVGKTNSWN-----------------------------PPNQSYPQYQNPSQPNPPNQSYPQYQN

Query:  PSQPNPPNQSYPQYQNPSQPNPPN
        PSQPN PNQ YPQYQNPSQPNPPN
Subjt:  PSQPNPPNQSYPQYQNPSQPNPPN

XP_008454941.1 PREDICTED: pentatricopeptide repeat-containing protein At2g15690 [Cucumis melo]6.0e-100100Show/hide
Query:  MASLMAVRRVRTPITVSSFFKVRYPLSSSFTFTFRNQTETLIKTLSTSAIPSDFSNFPSSPQQPSSSSPPYRQPQWGSPSQVNPPSENFNRQSFSEFQNH
        MASLMAVRRVRTPITVSSFFKVRYPLSSSFTFTFRNQTETLIKTLSTSAIPSDFSNFPSSPQQPSSSSPPYRQPQWGSPSQVNPPSENFNRQSFSEFQNH
Subjt:  MASLMAVRRVRTPITVSSFFKVRYPLSSSFTFTFRNQTETLIKTLSTSAIPSDFSNFPSSPQQPSSSSPPYRQPQWGSPSQVNPPSENFNRQSFSEFQNH

Query:  DYAQQGTPSNQLNYRSQHQSPQPNPGFSREGQSYTQVGKTNSWNPPNQSYPQYQNPSQPNPPNQSYPQYQNPSQPNPPNQSYPQYQNPSQPNPPNF
        DYAQQGTPSNQLNYRSQHQSPQPNPGFSREGQSYTQVGKTNSWNPPNQSYPQYQNPSQPNPPNQSYPQYQNPSQPNPPNQSYPQYQNPSQPNPPNF
Subjt:  DYAQQGTPSNQLNYRSQHQSPQPNPGFSREGQSYTQVGKTNSWNPPNQSYPQYQNPSQPNPPNQSYPQYQNPSQPNPPNQSYPQYQNPSQPNPPNF

XP_022952757.1 pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like [Cucurbita moschata]2.7e-6071.88Show/hide
Query:  MASLMAVRRVRTPITVSSFFKVRYPLSSSFTFTFRNQTETLIKTLSTSAIPSDFSNFPSSPQQPSSSSPPYRQPQWGSPSQVNPPSENFNRQSFSEFQNH
        MASLMAVRRVRTPI +SSF KVR PL S+FTF+  N+TETLIK LSTSA P DFSNFP+ PQQPSSS P Y Q QWGSPSQV+ PS NFN QSFSEFQN 
Subjt:  MASLMAVRRVRTPITVSSFFKVRYPLSSSFTFTFRNQTETLIKTLSTSAIPSDFSNFPSSPQQPSSSSPPYRQPQWGSPSQVNPPSENFNRQSFSEFQNH

Query:  DYAQQGTPSNQLNYRSQHQSPQPNPGFSREGQSYTQVGKTNSWNPPNQSYPQYQNPSQPNPPNQSYPQYQNPSQPNPPNQSYPQYQNPSQPN
        DY QQG+PSNQ+NYRSQ+QS  PNPGF R+GQSYTQ G  NSWNPPNQSYPQYQNPSQPNP N +Y Q + P+Q +  NQ  PQ+  P Q N
Subjt:  DYAQQGTPSNQLNYRSQHQSPQPNPGFSREGQSYTQVGKTNSWNPPNQSYPQYQNPSQPNPPNQSYPQYQNPSQPNPPNQSYPQYQNPSQPN

XP_031744652.1 pentatricopeptide repeat-containing protein At2g15690, mitochondrial [Cucumis sativus]9.6e-8279.46Show/hide
Query:  MASLMAVRRVRTPITVSSFFKVRYPLSSSFTFTFRNQTETLIKTLSTSAIPSDFSNFPSSPQQPSSSSPPYRQPQWGSPSQVNPPSENFNRQSFSEFQNH
        MASLMAVRR RTPI VSS FKVRYPLSS FTFTFRNQTETLIKTLSTSAIP+DFSNFPSSPQQPSSSSP YRQPQWGSPSQVNPPSENFN QSFSEFQN 
Subjt:  MASLMAVRRVRTPITVSSFFKVRYPLSSSFTFTFRNQTETLIKTLSTSAIPSDFSNFPSSPQQPSSSSPPYRQPQWGSPSQVNPPSENFNRQSFSEFQNH

Query:  DYAQQGTPSNQLNYRSQHQSPQPNPGFSREGQSYTQVGKTNSWN-----------------------------PPNQSYPQYQNPSQPNPPNQSYPQYQN
        DYAQQG+  NQLNYRSQHQSPQPNPGFSR+GQSY+QVGKTNSWN                             PPNQSYPQYQNPSQ NPPNQSY QYQN
Subjt:  DYAQQGTPSNQLNYRSQHQSPQPNPGFSREGQSYTQVGKTNSWN-----------------------------PPNQSYPQYQNPSQPNPPNQSYPQYQN

Query:  PSQPNPPNQSYPQYQNPSQPNPPN
        PSQPN PNQ YPQYQNPSQPNPPN
Subjt:  PSQPNPPNQSYPQYQNPSQPNPPN

TrEMBL top hitse value%identityAlignment
A0A0A0K6L3 DYW_deaminase domain-containing protein1.0e-8190.26Show/hide
Query:  MASLMAVRRVRTPITVSSFFKVRYPLSSSFTFTFRNQTETLIKTLSTSAIPSDFSNFPSSPQQPSSSSPPYRQPQWGSPSQVNPPSENFNRQSFSEFQNH
        MASLMAVRR RTPI VSS FKVRYPLSS FTFTFRNQTETLIKTLSTSAIP+DFSNFPSSPQQPSSSSP YRQPQWGSPSQVNPPSENFN QSFSEFQN 
Subjt:  MASLMAVRRVRTPITVSSFFKVRYPLSSSFTFTFRNQTETLIKTLSTSAIPSDFSNFPSSPQQPSSSSPPYRQPQWGSPSQVNPPSENFNRQSFSEFQNH

Query:  DYAQQGTPSNQLNYRSQHQSPQPNPGFSREGQSYTQVGKTNSWNPPNQSYPQYQNPSQPNPPNQSYPQYQNPSQPNPPNQSYPQYQNPSQPNPPN
        DYAQQG+  NQLNYRSQHQSPQPNPGFSR+GQSY+QVGKTNSWNPPNQS  QYQNPSQP PPNQS+PQYQNPSQP PPNQSYPQYQNPSQPN PN
Subjt:  DYAQQGTPSNQLNYRSQHQSPQPNPGFSREGQSYTQVGKTNSWNPPNQSYPQYQNPSQPNPPNQSYPQYQNPSQPNPPNQSYPQYQNPSQPNPPN

A0A1S3BZP9 pentatricopeptide repeat-containing protein At2g156902.9e-100100Show/hide
Query:  MASLMAVRRVRTPITVSSFFKVRYPLSSSFTFTFRNQTETLIKTLSTSAIPSDFSNFPSSPQQPSSSSPPYRQPQWGSPSQVNPPSENFNRQSFSEFQNH
        MASLMAVRRVRTPITVSSFFKVRYPLSSSFTFTFRNQTETLIKTLSTSAIPSDFSNFPSSPQQPSSSSPPYRQPQWGSPSQVNPPSENFNRQSFSEFQNH
Subjt:  MASLMAVRRVRTPITVSSFFKVRYPLSSSFTFTFRNQTETLIKTLSTSAIPSDFSNFPSSPQQPSSSSPPYRQPQWGSPSQVNPPSENFNRQSFSEFQNH

Query:  DYAQQGTPSNQLNYRSQHQSPQPNPGFSREGQSYTQVGKTNSWNPPNQSYPQYQNPSQPNPPNQSYPQYQNPSQPNPPNQSYPQYQNPSQPNPPNF
        DYAQQGTPSNQLNYRSQHQSPQPNPGFSREGQSYTQVGKTNSWNPPNQSYPQYQNPSQPNPPNQSYPQYQNPSQPNPPNQSYPQYQNPSQPNPPNF
Subjt:  DYAQQGTPSNQLNYRSQHQSPQPNPGFSREGQSYTQVGKTNSWNPPNQSYPQYQNPSQPNPPNQSYPQYQNPSQPNPPNQSYPQYQNPSQPNPPNF

A0A5D3C491 Pentatricopeptide repeat-containing protein3.6e-9898.97Show/hide
Query:  MASLMAVRRVRTPITVSSFFKVRYPLSSSFTFTFRNQTETLIKTLSTSAIPSDFSNFPSSPQQPSSSSPPYRQPQWGSPSQVNPPSENFNRQSFSEFQNH
        MASLMAVRRVRTPITVSSFFKVRYPLSSSFTFTFRNQTETLIKTLSTSAIPSDFSNFPSSPQQPSSSSPPYRQPQWGSPSQVNPPSENFNRQSFSEFQNH
Subjt:  MASLMAVRRVRTPITVSSFFKVRYPLSSSFTFTFRNQTETLIKTLSTSAIPSDFSNFPSSPQQPSSSSPPYRQPQWGSPSQVNPPSENFNRQSFSEFQNH

Query:  DYAQQGTPSNQLNYRSQHQSPQPNPGFSREGQSYTQVGKTNSWNPPNQSYPQYQNPSQPNPPNQSYPQYQNPSQPNPPNQSYPQYQNPSQPNPPN
        DYAQQGTPSNQLNYRSQHQSPQPNPGFSREGQSYTQVGKTNSWNPPNQSYPQYQNPSQPNPPNQSYPQYQ PSQP+PPNQSYPQYQNPSQPNPPN
Subjt:  DYAQQGTPSNQLNYRSQHQSPQPNPGFSREGQSYTQVGKTNSWNPPNQSYPQYQNPSQPNPPNQSYPQYQNPSQPNPPNQSYPQYQNPSQPNPPN

A0A6J1GL94 pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like1.3e-6071.88Show/hide
Query:  MASLMAVRRVRTPITVSSFFKVRYPLSSSFTFTFRNQTETLIKTLSTSAIPSDFSNFPSSPQQPSSSSPPYRQPQWGSPSQVNPPSENFNRQSFSEFQNH
        MASLMAVRRVRTPI +SSF KVR PL S+FTF+  N+TETLIK LSTSA P DFSNFP+ PQQPSSS P Y Q QWGSPSQV+ PS NFN QSFSEFQN 
Subjt:  MASLMAVRRVRTPITVSSFFKVRYPLSSSFTFTFRNQTETLIKTLSTSAIPSDFSNFPSSPQQPSSSSPPYRQPQWGSPSQVNPPSENFNRQSFSEFQNH

Query:  DYAQQGTPSNQLNYRSQHQSPQPNPGFSREGQSYTQVGKTNSWNPPNQSYPQYQNPSQPNPPNQSYPQYQNPSQPNPPNQSYPQYQNPSQPN
        DY QQG+PSNQ+NYRSQ+QS  PNPGF R+GQSYTQ G  NSWNPPNQSYPQYQNPSQPNP N +Y Q + P+Q +  NQ  PQ+  P Q N
Subjt:  DYAQQGTPSNQLNYRSQHQSPQPNPGFSREGQSYTQVGKTNSWNPPNQSYPQYQNPSQPNPPNQSYPQYQNPSQPNPPNQSYPQYQNPSQPN

A0A6J1I4R8 pentatricopeptide repeat-containing protein At2g15690, mitochondrial-like1.8e-5770.83Show/hide
Query:  MASLMAVRRVRTPITVSSFFKVRYPLSSSFTFTFRNQTETLIKTLSTSAIPSDFSNFPSSPQQPSSSSPPYRQPQWGSPSQVNPPSENFNRQSFSEFQNH
        MASLMAVRRVRTPI +SSF KVR PL S+FTF+  NQTETLIK LSTSA P DFSNFP+ PQQPSSS P Y Q Q GSPSQV+ PS NFN QSFSEFQN 
Subjt:  MASLMAVRRVRTPITVSSFFKVRYPLSSSFTFTFRNQTETLIKTLSTSAIPSDFSNFPSSPQQPSSSSPPYRQPQWGSPSQVNPPSENFNRQSFSEFQNH

Query:  DYAQQGTPSNQLNYRSQHQSPQPNPGFSREGQSYTQVGKTNSWNPPNQSYPQYQNPSQPNPPNQSYPQYQNPSQPNPPNQSYPQYQNPSQPN
        DY Q G+PSNQ+N RSQ+QS  PNPGF R+GQSYTQ G  NSWNPPNQSYPQYQNPSQPNP N +Y Q + P+Q +  NQ  PQ+  P Q N
Subjt:  DYAQQGTPSNQLNYRSQHQSPQPNPGFSREGQSYTQVGKTNSWNPPNQSYPQYQNPSQPNPPNQSYPQYQNPSQPNPPNQSYPQYQNPSQPN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCTCTAATGGCTGTCCGGCGTGTTCGAACCCCCATTACTGTCTCCTCCTTCTTCAAGGTACGGTATCCTCTCTCTTCTTCTTTCACTTTCACTTTTCGAAACCA
GACGGAGACACTAATCAAAACCCTAAGCACCTCGGCAATTCCTAGCGATTTCTCTAACTTTCCTTCTTCGCCGCAACAACCTTCTTCGTCTAGCCCTCCATATCGTCAGC
CGCAGTGGGGCTCGCCGAGCCAGGTTAATCCTCCAAGTGAAAATTTTAATCGCCAGTCGTTCTCGGAGTTTCAGAATCACGATTATGCTCAACAGGGAACTCCTAGTAAT
CAATTGAATTATCGGAGTCAGCATCAGAGTCCTCAACCCAATCCTGGATTTTCCCGGGAGGGTCAGAGCTATACTCAAGTCGGCAAAACTAATTCGTGGAACCCTCCAAA
TCAAAGTTACCCTCAATATCAAAATCCTTCGCAGCCGAACCCTCCAAATCAAAGCTACCCTCAATATCAAAATCCTTCGCAGCCAAACCCTCCAAATCAAAGCTACCCTC
AATATCAAAATCCTTCGCAGCCGAACCCTCCAAATTTC
mRNA sequenceShow/hide mRNA sequence
AATTTTCCAAATACTTTTGTCTTACTTTTTGTCTTCCGCTCACAAGCTCTCGGTAACTGAGGTTTCTCTCAACCTTTCCTTAGGGTTTAGGCCTTTTCTCATCAAGAAAT
GGCGTCTCTAATGGCTGTCCGGCGTGTTCGAACCCCCATTACTGTCTCCTCCTTCTTCAAGGTACGGTATCCTCTCTCTTCTTCTTTCACTTTCACTTTTCGAAACCAGA
CGGAGACACTAATCAAAACCCTAAGCACCTCGGCAATTCCTAGCGATTTCTCTAACTTTCCTTCTTCGCCGCAACAACCTTCTTCGTCTAGCCCTCCATATCGTCAGCCG
CAGTGGGGCTCGCCGAGCCAGGTTAATCCTCCAAGTGAAAATTTTAATCGCCAGTCGTTCTCGGAGTTTCAGAATCACGATTATGCTCAACAGGGAACTCCTAGTAATCA
ATTGAATTATCGGAGTCAGCATCAGAGTCCTCAACCCAATCCTGGATTTTCCCGGGAGGGTCAGAGCTATACTCAAGTCGGCAAAACTAATTCGTGGAACCCTCCAAATC
AAAGTTACCCTCAATATCAAAATCCTTCGCAGCCGAACCCTCCAAATCAAAGCTACCCTCAATATCAAAATCCTTCGCAGCCAAACCCTCCAAATCAAAGCTACCCTCAA
TATCAAAATCCTTCGCAGCCGAACCCTCCAAATTTCAA
Protein sequenceShow/hide protein sequence
MASLMAVRRVRTPITVSSFFKVRYPLSSSFTFTFRNQTETLIKTLSTSAIPSDFSNFPSSPQQPSSSSPPYRQPQWGSPSQVNPPSENFNRQSFSEFQNHDYAQQGTPSN
QLNYRSQHQSPQPNPGFSREGQSYTQVGKTNSWNPPNQSYPQYQNPSQPNPPNQSYPQYQNPSQPNPPNQSYPQYQNPSQPNPPNF