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MELO3C019268 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C019268
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionRetrotransposon protein
Genome locationchr11:10288540..10288725
RNA-Seq ExpressionMELO3C019268
SyntenyMELO3C019268
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026116.1 retrotransposon protein [Cucumis melo var. makuwa]6.2e-1977.05Show/hide
Query:  MASSSRAPNHLWTKEEDATFVECLVELVNNDGWRSDNGTFRPEYHSQLARMMAQKMPGCNI
        M SSSR P H WTKEE+A  VECLVELVN  GWRSDNGTFRP Y +QLARMMA K+PGCNI
Subjt:  MASSSRAPNHLWTKEEDATFVECLVELVNNDGWRSDNGTFRPEYHSQLARMMAQKMPGCNI

KAA0036555.1 retrotransposon protein [Cucumis melo var. makuwa]6.2e-1975.41Show/hide
Query:  MASSSRAPNHLWTKEEDATFVECLVELVNNDGWRSDNGTFRPEYHSQLARMMAQKMPGCNI
        MASSSR P H WTKEE+A+ +ECLVELVN  GWRSDNGTFRP Y +QLARMM  K+PGCNI
Subjt:  MASSSRAPNHLWTKEEDATFVECLVELVNNDGWRSDNGTFRPEYHSQLARMMAQKMPGCNI

KAA0047075.1 retrotransposon protein [Cucumis melo var. makuwa]2.8e-1977.05Show/hide
Query:  MASSSRAPNHLWTKEEDATFVECLVELVNNDGWRSDNGTFRPEYHSQLARMMAQKMPGCNI
        MASSSR P H WTKEE+A+ VECLVELVN  GWRSDNGTFRP Y +QL RMMA K+PGCNI
Subjt:  MASSSRAPNHLWTKEEDATFVECLVELVNNDGWRSDNGTFRPEYHSQLARMMAQKMPGCNI

TYK05082.1 retrotransposon protein [Cucumis melo var. makuwa]2.8e-1977.05Show/hide
Query:  MASSSRAPNHLWTKEEDATFVECLVELVNNDGWRSDNGTFRPEYHSQLARMMAQKMPGCNI
        MASSSR P H WTKEE+A+ VECLVELVN  GWRSDNGTFRP Y +QL RMMA K+PGCNI
Subjt:  MASSSRAPNHLWTKEEDATFVECLVELVNNDGWRSDNGTFRPEYHSQLARMMAQKMPGCNI

TYK24214.1 retrotransposon protein [Cucumis melo var. makuwa]8.9e-26100Show/hide
Query:  MASSSRAPNHLWTKEEDATFVECLVELVNNDGWRSDNGTFRPEYHSQLARMMAQKMP
        MASSSRAPNHLWTKEEDATFVECLVELVNNDGWRSDNGTFRPEYHSQLARMMAQKMP
Subjt:  MASSSRAPNHLWTKEEDATFVECLVELVNNDGWRSDNGTFRPEYHSQLARMMAQKMP

TrEMBL top hitse value%identityAlignment
A0A5A7TUJ7 Retrotransposon protein3.0e-1977.05Show/hide
Query:  MASSSRAPNHLWTKEEDATFVECLVELVNNDGWRSDNGTFRPEYHSQLARMMAQKMPGCNI
        M SSSR P H WTKEE+A  VECLVELVN  GWRSDNGTFRP Y +QLARMMA K+PGCNI
Subjt:  MASSSRAPNHLWTKEEDATFVECLVELVNNDGWRSDNGTFRPEYHSQLARMMAQKMPGCNI

A0A5A7U098 Retrotransposon protein1.3e-1977.05Show/hide
Query:  MASSSRAPNHLWTKEEDATFVECLVELVNNDGWRSDNGTFRPEYHSQLARMMAQKMPGCNI
        MASSSR P H WTKEE+A+ VECLVELVN  GWRSDNGTFRP Y +QL RMMA K+PGCNI
Subjt:  MASSSRAPNHLWTKEEDATFVECLVELVNNDGWRSDNGTFRPEYHSQLARMMAQKMPGCNI

A0A5D3BKP9 Retrotransposon protein3.0e-1977.05Show/hide
Query:  MASSSRAPNHLWTKEEDATFVECLVELVNNDGWRSDNGTFRPEYHSQLARMMAQKMPGCNI
        M SSSR P H WTKEE+A  VECLVELVN  GWRSDNGTFRP Y +QLARMMA K+PGCNI
Subjt:  MASSSRAPNHLWTKEEDATFVECLVELVNNDGWRSDNGTFRPEYHSQLARMMAQKMPGCNI

A0A5D3C1M0 Retrotransposon protein1.3e-1977.05Show/hide
Query:  MASSSRAPNHLWTKEEDATFVECLVELVNNDGWRSDNGTFRPEYHSQLARMMAQKMPGCNI
        MASSSR P H WTKEE+A+ VECLVELVN  GWRSDNGTFRP Y +QL RMMA K+PGCNI
Subjt:  MASSSRAPNHLWTKEEDATFVECLVELVNNDGWRSDNGTFRPEYHSQLARMMAQKMPGCNI

A0A5D3DKT3 Retrotransposon protein4.3e-26100Show/hide
Query:  MASSSRAPNHLWTKEEDATFVECLVELVNNDGWRSDNGTFRPEYHSQLARMMAQKMP
        MASSSRAPNHLWTKEEDATFVECLVELVNNDGWRSDNGTFRPEYHSQLARMMAQKMP
Subjt:  MASSSRAPNHLWTKEEDATFVECLVELVNNDGWRSDNGTFRPEYHSQLARMMAQKMP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGTTCATCAAGGGCCCCTAACCACTTATGGACAAAAGAGGAGGACGCAACCTTCGTGGAATGCCTGGTGGAGTTGGTCAACAACGATGGTTGGCGATCC
GACAATGGAACCTTTAGACCTGAGTACCATAGTCAGCTTGCAAGAATGATGGCTCAGAAGATGCCAGGTTGTAACATATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGTTCATCAAGGGCCCCTAACCACTTATGGACAAAAGAGGAGGACGCAACCTTCGTGGAATGCCTGGTGGAGTTGGTCAACAACGATGGTTGGCGATCC
GACAATGGAACCTTTAGACCTGAGTACCATAGTCAGCTTGCAAGAATGATGGCTCAGAAGATGCCAGGTTGTAACATATAG
Protein sequenceShow/hide protein sequence
MASSSRAPNHLWTKEEDATFVECLVELVNNDGWRSDNGTFRPEYHSQLARMMAQKMPGCNI