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MELO3C019727.jh1 (gene) of Melon (Harukei-3) v1.41 genome

Gene IDMELO3C019727.jh1
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionGag/pol protein
Genome locationchr11:23331584..23332160
RNA-Seq ExpressionMELO3C019727.jh1
SyntenyMELO3C019727.jh1
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035596.1 hypothetical protein E6C27_scaffold285G002700 [Cucumis melo var. makuwa]1.68e-1258.49Show/hide
Query:  KFYAAKYHPTDFYTTGEGKKIFFNVDMINTLYDLPNDTKYPGHELINNLTKGS
        KFY A YHP++FY T EGKK+FF+ + IN LYDLPND +YP   +I   TKG+
Subjt:  KFYAAKYHPTDFYTTGEGKKIFFNVDMINTLYDLPNDTKYPGHELINNLTKGS

KAA0049901.1 hypothetical protein E6C27_scaffold13G00540 [Cucumis melo var. makuwa]5.55e-1559.65Show/hide
Query:  KKFYAAKYHPTDFYTTGEGKKIFFNVDMINTLYDLPNDTKYPGHELINNLTKGSDRE
        KKFY AKYHPTD Y T E +KI+F+ + IN LYDLPND +YPGH +I   T+G  +E
Subjt:  KKFYAAKYHPTDFYTTGEGKKIFFNVDMINTLYDLPNDTKYPGHELINNLTKGSDRE

KAA0062068.1 hypothetical protein E6C27_scaffold89G004130 [Cucumis melo var. makuwa]5.30e-1050Show/hide
Query:  FYAAKYHPTDFYTTGEGKKIFFNVDMINTLYDLPNDTKYPGHELINNLTKGSDREAGH
        FYAAK+HP D     +G++IFF  ++IN LY L N+ +Y GHELIN+LT+  D    H
Subjt:  FYAAKYHPTDFYTTGEGKKIFFNVDMINTLYDLPNDTKYPGHELINNLTKGSDREAGH

KAA0062900.1 gag/pol protein [Cucumis melo var. makuwa]3.51e-0847.37Show/hide
Query:  KFYAAKYHPTDFYTTGEGKKIFFNVDMINTLYDLPNDTKYPGHELINNLTKGSDREA
        KFY  K++P+D + T E +K +FNV++IN LY+ PND +Y G E++   TKG  +EA
Subjt:  KFYAAKYHPTDFYTTGEGKKIFFNVDMINTLYDLPNDTKYPGHELINNLTKGSDREA

TYK30940.1 hypothetical protein E5676_scaffold455G001650 [Cucumis melo var. makuwa]1.41e-1259.62Show/hide
Query:  KFYAAKYHPTDFYTTGEGKKIFFNVDMINTLYDLPNDTKYPGHELINNLTKG
        KFY A YHP++FY T EGKK+FF+ + IN LYDLPND +YP   +I   TKG
Subjt:  KFYAAKYHPTDFYTTGEGKKIFFNVDMINTLYDLPNDTKYPGHELINNLTKG

TrEMBL top hitse value%identityAlignment
A0A5A7T079 Uncharacterized protein8.16e-1358.49Show/hide
Query:  KFYAAKYHPTDFYTTGEGKKIFFNVDMINTLYDLPNDTKYPGHELINNLTKGS
        KFY A YHP++FY T EGKK+FF+ + IN LYDLPND +YP   +I   TKG+
Subjt:  KFYAAKYHPTDFYTTGEGKKIFFNVDMINTLYDLPNDTKYPGHELINNLTKGS

A0A5A7U8H4 Uncharacterized protein2.69e-1559.65Show/hide
Query:  KKFYAAKYHPTDFYTTGEGKKIFFNVDMINTLYDLPNDTKYPGHELINNLTKGSDRE
        KKFY AKYHPTD Y T E +KI+F+ + IN LYDLPND +YPGH +I   T+G  +E
Subjt:  KKFYAAKYHPTDFYTTGEGKKIFFNVDMINTLYDLPNDTKYPGHELINNLTKGSDRE

A0A5A7V6M5 Gag/pol protein1.70e-0847.37Show/hide
Query:  KFYAAKYHPTDFYTTGEGKKIFFNVDMINTLYDLPNDTKYPGHELINNLTKGSDREA
        KFY  K++P+D + T E +K +FNV++IN LY+ PND +Y G E++   TKG  +EA
Subjt:  KFYAAKYHPTDFYTTGEGKKIFFNVDMINTLYDLPNDTKYPGHELINNLTKGSDREA

A0A5D3C198 Uncharacterized protein2.57e-1050Show/hide
Query:  FYAAKYHPTDFYTTGEGKKIFFNVDMINTLYDLPNDTKYPGHELINNLTKGSDREAGH
        FYAAK+HP D     +G++IFF  ++IN LY L N+ +Y GHELIN+LT+  D    H
Subjt:  FYAAKYHPTDFYTTGEGKKIFFNVDMINTLYDLPNDTKYPGHELINNLTKGSDREAGH

A0A5D3E5P6 Uncharacterized protein6.82e-1359.62Show/hide
Query:  KFYAAKYHPTDFYTTGEGKKIFFNVDMINTLYDLPNDTKYPGHELINNLTKG
        KFY A YHP++FY T EGKK+FF+ + IN LYDLPND +YP   +I   TKG
Subjt:  KFYAAKYHPTDFYTTGEGKKIFFNVDMINTLYDLPNDTKYPGHELINNLTKG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCAAAAAAATTCTATGCGGCAAAGTATCATCCAACTGACTTCTATACAACAGGTGAGGGCAAGAAGATTTTCTTTAATGTGGACATGATTAACACGTTATATGA
TTTGCCAAATGACACGAAGTACCCTGGGCACGAGCTCATCAACAATCTTACAAAAGGTAGCGATAGGGAAGCTGGACACGGCGCGGCTGCACGCGGAGAGGGCTGGGCAC
GGACGCGGTTCGGTTTCGGGTTCGGCGAGCGGGCGTGGAGCGGCTCGGGTTCGGGTTCGACGGTGGAGGCGCGCGGCGCGTGGCTGCTGGACTTCTCGGCACGACGGCGC
GGCGGGCGACGGACGTTCGGCTGCGTCGGCTCAGCGGCTCCTCAACGCTTG
mRNA sequenceShow/hide mRNA sequence
ATGCAGTCAAAAAAATTCTATGCGGCAAAGTATCATCCAACTGACTTCTATACAACAGGTGAGGGCAAGAAGATTTTCTTTAATGTGGACATGATTAACACGTTATATGA
TTTGCCAAATGACACGAAGTACCCTGGGCACGAGCTCATCAACAATCTTACAAAAGGTAGCGATAGGGAAGCTGGACACGGCGCGGCTGCACGCGGAGAGGGCTGGGCAC
GGACGCGGTTCGGTTTCGGGTTCGGCGAGCGGGCGTGGAGCGGCTCGGGTTCGGGTTCGACGGTGGAGGCGCGCGGCGCGTGGCTGCTGGACTTCTCGGCACGACGGCGC
GGCGGGCGACGGACGTTCGGCTGCGTCGGCTCAGCGGCTCCTCAACGCTTGA
Protein sequenceShow/hide protein sequence
MQSKKFYAAKYHPTDFYTTGEGKKIFFNVDMINTLYDLPNDTKYPGHELINNLTKGSDREAGHGAAARGEGWARTRFGFGFGERAWSGSGSGSTVEARGAWLLDFSARRR
GGRRTFGCVGSAAPQRL