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MELO3C020011 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C020011
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionPHD finger protein ALFIN-LIKE 3-like
Genome locationchr03:19172109..19172807
RNA-Seq ExpressionMELO3C020011
SyntenyMELO3C020011
Gene Ontology termsGO:0006325 - chromatin organization (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003712 - transcription coregulator activity (molecular function)
GO:0042393 - histone binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR045104 - Alfin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033351.1 PHD finger protein ALFIN-LIKE 3-like isoform X1 [Cucumis melo var. makuwa]1.1e-2278.05Show/hide
Query:  NTEKATVASASMREELSSIFFEIHYETLREVEMQGMYAWQSQAREEVETLCEEDEDEHGDTLCGACGKKYASDEFWICCNIC
        N EKATV SAS REELSSIFFE      REVEMQGMY+ QSQAREEV T CEEDEDEHGDTLCGAC + YASDEF ICC+IC
Subjt:  NTEKATVASASMREELSSIFFEIHYETLREVEMQGMYAWQSQAREEVETLCEEDEDEHGDTLCGACGKKYASDEFWICCNIC

KAA0051989.1 PHD finger protein ALFIN-LIKE 3-like isoform X2 [Cucumis melo var. makuwa]1.3e-47100Show/hide
Query:  MPNTEKATVASASMREELSSIFFEIHYETLREVEMQGMYAWQSQAREEVETLCEEDEDEHGDTLCGACGKKYASDEFWICCNICCMKKCFSLSVSL
        MPNTEKATVASASMREELSSIFFEIHYETLREVEMQGMYAWQSQAREEVETLCEEDEDEHGDTLCGACGKKYASDEFWICCNICCMKKCFSLSVSL
Subjt:  MPNTEKATVASASMREELSSIFFEIHYETLREVEMQGMYAWQSQAREEVETLCEEDEDEHGDTLCGACGKKYASDEFWICCNICCMKKCFSLSVSL

KAA0065879.1 PHD finger protein ALFIN-LIKE 3-like isoform X2 [Cucumis melo var. makuwa]2.1e-2167.86Show/hide
Query:  MPNTEKATVASASMREELSSIFFEIHYETLREVEMQGMYAWQSQAREEVETLCEEDEDEHGDTLCGACGKKYASDEFWICCNIC
        +PNTEKATV SAS+R ELSSIFFE                  SQAREEVETLCEEDEDEH DT+CGACG+ YASDEFWICC+IC
Subjt:  MPNTEKATVASASMREELSSIFFEIHYETLREVEMQGMYAWQSQAREEVETLCEEDEDEHGDTLCGACGKKYASDEFWICCNIC

XP_016903218.1 PREDICTED: uncharacterized protein LOC103502427 isoform X1 [Cucumis melo]1.4e-2287.88Show/hide
Query:  MPNTEKATVASASMREELSSIFFEIHYETLREVEMQGMYAWQSQAREEVETLCEEDEDEHGDTLCG
        +PNTEKATV SASMREELSSIFFE+HYET R+ E QGMYA QSQAREEVETLCEEDEDEHGDTLCG
Subjt:  MPNTEKATVASASMREELSSIFFEIHYETLREVEMQGMYAWQSQAREEVETLCEEDEDEHGDTLCG

XP_038897957.1 PHD finger protein ALFIN-LIKE 3-like [Benincasa hispida]4.3e-1968.42Show/hide
Query:  VASASMREELSSIFFEIHYETLREVEMQGMYAWQSQAREEVETLCEEDEDEHGDTLCGACGKKYASDEFWICCNIC
        +A   ++E+ SS   +  ++T RE EMQGMYA Q QAREEVETL EEDEDEHGDTLCGACG+ YASDEFWICC+IC
Subjt:  VASASMREELSSIFFEIHYETLREVEMQGMYAWQSQAREEVETLCEEDEDEHGDTLCGACGKKYASDEFWICCNIC

TrEMBL top hitse value%identityAlignment
A0A0A0K9L1 PHD-type domain-containing protein4.7e-1988.89Show/hide
Query:  REVEMQGMYAWQSQAREEVETLCEEDEDEHGDTLCGACGKKYASDEFWICCNIC
        RE EMQGMYA QSQAREEVETL EEDEDEHGDTLCGACG+ YASDEFWICC+IC
Subjt:  REVEMQGMYAWQSQAREEVETLCEEDEDEHGDTLCGACGKKYASDEFWICCNIC

A0A1S4E4Q8 uncharacterized protein LOC103502427 isoform X17.0e-2387.88Show/hide
Query:  MPNTEKATVASASMREELSSIFFEIHYETLREVEMQGMYAWQSQAREEVETLCEEDEDEHGDTLCG
        +PNTEKATV SASMREELSSIFFE+HYET R+ E QGMYA QSQAREEVETLCEEDEDEHGDTLCG
Subjt:  MPNTEKATVASASMREELSSIFFEIHYETLREVEMQGMYAWQSQAREEVETLCEEDEDEHGDTLCG

A0A5A7SV72 PHD finger protein ALFIN-LIKE 3-like isoform X15.3e-2378.05Show/hide
Query:  NTEKATVASASMREELSSIFFEIHYETLREVEMQGMYAWQSQAREEVETLCEEDEDEHGDTLCGACGKKYASDEFWICCNIC
        N EKATV SAS REELSSIFFE      REVEMQGMY+ QSQAREEV T CEEDEDEHGDTLCGAC + YASDEF ICC+IC
Subjt:  NTEKATVASASMREELSSIFFEIHYETLREVEMQGMYAWQSQAREEVETLCEEDEDEHGDTLCGACGKKYASDEFWICCNIC

A0A5D3C2E9 PHD finger protein ALFIN-LIKE 3-like isoform X26.3e-48100Show/hide
Query:  MPNTEKATVASASMREELSSIFFEIHYETLREVEMQGMYAWQSQAREEVETLCEEDEDEHGDTLCGACGKKYASDEFWICCNICCMKKCFSLSVSL
        MPNTEKATVASASMREELSSIFFEIHYETLREVEMQGMYAWQSQAREEVETLCEEDEDEHGDTLCGACGKKYASDEFWICCNICCMKKCFSLSVSL
Subjt:  MPNTEKATVASASMREELSSIFFEIHYETLREVEMQGMYAWQSQAREEVETLCEEDEDEHGDTLCGACGKKYASDEFWICCNICCMKKCFSLSVSL

A0A5D3CV69 PHD finger protein ALFIN-LIKE 3-like isoform X21.0e-2167.86Show/hide
Query:  MPNTEKATVASASMREELSSIFFEIHYETLREVEMQGMYAWQSQAREEVETLCEEDEDEHGDTLCGACGKKYASDEFWICCNIC
        +PNTEKATV SAS+R ELSSIFFE                  SQAREEVETLCEEDEDEH DT+CGACG+ YASDEFWICC+IC
Subjt:  MPNTEKATVASASMREELSSIFFEIHYETLREVEMQGMYAWQSQAREEVETLCEEDEDEHGDTLCGACGKKYASDEFWICCNIC

SwissProt top hitse value%identityAlignment
O81488 PHD finger protein ALFIN-LIKE 43.2e-0967.5Show/hide
Query:  EEVETLCEEDEDEHGDTLCGACGKKYASDEFWICCNICCM
        EE E + EEDEDE G+T CGACG+ YA+DEFWICC++C M
Subjt:  EEVETLCEEDEDEHGDTLCGACGKKYASDEFWICCNICCM

Q5XEM9 PHD finger protein ALFIN-LIKE 53.8e-1073.68Show/hide
Query:  EEVETLCEEDEDEHGDTLCGACGKKYASDEFWICCNIC
        EE E   +EDEDEHG+TLCGACG  YASDEFWICC++C
Subjt:  EEVETLCEEDEDEHGDTLCGACGKKYASDEFWICCNIC

Q9FFF5 PHD finger protein ALFIN-LIKE 11.2e-0861.11Show/hide
Query:  VETLCEEDEDEHGDTLCGACGKKYASDEFWICCNIC
        +E   E+++DEHGDTLCG+CG  Y +DEFWICC++C
Subjt:  VETLCEEDEDEHGDTLCGACGKKYASDEFWICCNIC

Q9M2B4 PHD finger protein ALFIN-LIKE 31.5e-0953.06Show/hide
Query:  QGMYAWQSQAREEVETLCEEDEDEHGDTLCGACGKKYASDEFWICCNIC
        +G  +   Q +EE E + E+DED+HG+TLCGACG    +DEFWICC++C
Subjt:  QGMYAWQSQAREEVETLCEEDEDEHGDTLCGACGKKYASDEFWICCNIC

Q9SRM4 PHD finger protein ALFIN-LIKE 21.2e-0870.97Show/hide
Query:  EEDEDEHGDTLCGACGKKYASDEFWICCNIC
        EE+EDEHGDTLCG+CG  Y ++EFWICC++C
Subjt:  EEDEDEHGDTLCGACGKKYASDEFWICCNIC

Arabidopsis top hitse value%identityAlignment
AT3G11200.1 alfin-like 28.8e-1070.97Show/hide
Query:  EEDEDEHGDTLCGACGKKYASDEFWICCNIC
        EE+EDEHGDTLCG+CG  Y ++EFWICC++C
Subjt:  EEDEDEHGDTLCGACGKKYASDEFWICCNIC

AT3G11200.2 alfin-like 28.8e-1070.97Show/hide
Query:  EEDEDEHGDTLCGACGKKYASDEFWICCNIC
        EE+EDEHGDTLCG+CG  Y ++EFWICC++C
Subjt:  EEDEDEHGDTLCGACGKKYASDEFWICCNIC

AT3G42790.1 alfin-like 31.0e-1053.06Show/hide
Query:  QGMYAWQSQAREEVETLCEEDEDEHGDTLCGACGKKYASDEFWICCNIC
        +G  +   Q +EE E + E+DED+HG+TLCGACG    +DEFWICC++C
Subjt:  QGMYAWQSQAREEVETLCEEDEDEHGDTLCGACGKKYASDEFWICCNIC

AT5G20510.1 alfin-like 52.7e-1173.68Show/hide
Query:  EEVETLCEEDEDEHGDTLCGACGKKYASDEFWICCNIC
        EE E   +EDEDEHG+TLCGACG  YASDEFWICC++C
Subjt:  EEVETLCEEDEDEHGDTLCGACGKKYASDEFWICCNIC

AT5G26210.1 alfin-like 42.3e-1067.5Show/hide
Query:  EEVETLCEEDEDEHGDTLCGACGKKYASDEFWICCNICCM
        EE E + EEDEDE G+T CGACG+ YA+DEFWICC++C M
Subjt:  EEVETLCEEDEDEHGDTLCGACGKKYASDEFWICCNICCM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCAACACAGAGAAAGCAACGGTCGCGAGTGCTTCAATGAGGGAGGAGTTATCGAGCATTTTCTTCGAGATACATTATGAGACTTTGAGGGAAGTTGAAATGCAAGG
AATGTACGCATGGCAGTCACAGGCAAGGGAAGAGGTAGAGACGTTGTGTGAAGAAGATGAAGACGAGCATGGTGACACCTTATGTGGGGCATGCGGTAAGAAGTATGCTT
CAGATGAATTTTGGATTTGCTGTAATATTTGTTGTATGAAGAAATGCTTCAGTTTATCAGTTTCCTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCCAACACAGAGAAAGCAACGGTCGCGAGTGCTTCAATGAGGGAGGAGTTATCGAGCATTTTCTTCGAGATACATTATGAGACTTTGAGGGAAGTTGAAATGCAAGG
AATGTACGCATGGCAGTCACAGGCAAGGGAAGAGGTAGAGACGTTGTGTGAAGAAGATGAAGACGAGCATGGTGACACCTTATGTGGGGCATGCGGTAAGAAGTATGCTT
CAGATGAATTTTGGATTTGCTGTAATATTTGTTGTATGAAGAAATGCTTCAGTTTATCAGTTTCCTTGTGA
Protein sequenceShow/hide protein sequence
MPNTEKATVASASMREELSSIFFEIHYETLREVEMQGMYAWQSQAREEVETLCEEDEDEHGDTLCGACGKKYASDEFWICCNICCMKKCFSLSVSL