; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C020019 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C020019
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionRetrotransposon protein
Genome locationchr03:18968062..18968364
RNA-Seq ExpressionMELO3C020019
SyntenyMELO3C020019
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051922.1 retrotransposon protein [Cucumis melo var. makuwa]7.7e-1146.39Show/hide
Query:  GRFSETFADIGSNKPLSMSGLTCRMRTISYLCVAKE-LTCSRRMYTHHKLLVRQSGR--SSELKRKRGSQREGKIEVIHMTLECTNDQLMTIAEWSA
        GRF ETF D+GSN+P    G         +  V  + +  S+      +  +   GR  SSELK KRG+Q+EG++EVIHM LECTND L TIAEW A
Subjt:  GRFSETFADIGSNKPLSMSGLTCRMRTISYLCVAKE-LTCSRRMYTHHKLLVRQSGR--SSELKRKRGSQREGKIEVIHMTLECTNDQLMTIAEWSA

KAA0051964.1 retrotransposon protein [Cucumis melo var. makuwa]5.5e-49100Show/hide
Query:  MGRFSETFADIGSNKPLSMSGLTCRMRTISYLCVAKELTCSRRMYTHHKLLVRQSGRSSELKRKRGSQREGKIEVIHMTLECTNDQLMTIAEWSAQRPCQ
        MGRFSETFADIGSNKPLSMSGLTCRMRTISYLCVAKELTCSRRMYTHHKLLVRQSGRSSELKRKRGSQREGKIEVIHMTLECTNDQLMTIAEWSAQRPCQ
Subjt:  MGRFSETFADIGSNKPLSMSGLTCRMRTISYLCVAKELTCSRRMYTHHKLLVRQSGRSSELKRKRGSQREGKIEVIHMTLECTNDQLMTIAEWSAQRPCQ

KAA0066074.1 retrotransposon protein [Cucumis melo var. makuwa]6.6e-1047.31Show/hide
Query:  MGRFSETFADIGSNKPLSMSGLTCRMRTISYLCV-AKELTCSRRMYTHHKLLVRQSGRSSELKRKRGSQREGKIEVIHMTLECTNDQLMTIAE
        MGRF+ETF D+GSN+P+   G         +  V ++ +  S++     +      GR    KRKRGSQ+EG+IEVIHM LECTN+QLMTIAE
Subjt:  MGRFSETFADIGSNKPLSMSGLTCRMRTISYLCV-AKELTCSRRMYTHHKLLVRQSGRSSELKRKRGSQREGKIEVIHMTLECTNDQLMTIAE

KAA0066185.1 retrotransposon protein [Cucumis melo var. makuwa]5.0e-1046.39Show/hide
Query:  RFSETFADIGSNKPLSMSGLTCRMRTISYLCVAKE-LTCSRRMYTHHKLLVRQSGR--SSELKRKRGSQREGKIEVIHMTLECTNDQLMTIAEWSAQ
        RF ETF D+ SN+P+   G         +  +  + +  S++     +      GR  SS LKRKRGSQREGKIEVIHM LEC NDQ  TIAEW A+
Subjt:  RFSETFADIGSNKPLSMSGLTCRMRTISYLCVAKE-LTCSRRMYTHHKLLVRQSGR--SSELKRKRGSQREGKIEVIHMTLECTNDQLMTIAEWSAQ

TYK15225.1 retrotransposon protein [Cucumis melo var. makuwa]5.0e-1046.39Show/hide
Query:  RFSETFADIGSNKPLSMSGLTCRMRTISYLCVAKE-LTCSRRMYTHHKLLVRQSGR--SSELKRKRGSQREGKIEVIHMTLECTNDQLMTIAEWSAQ
        RF ETF D+ SN+P+   G         +  +  + +  S++     +      GR  SS LKRKRGSQREGKIEVIHM LEC NDQ  TIAEW A+
Subjt:  RFSETFADIGSNKPLSMSGLTCRMRTISYLCVAKE-LTCSRRMYTHHKLLVRQSGR--SSELKRKRGSQREGKIEVIHMTLECTNDQLMTIAEWSAQ

TrEMBL top hitse value%identityAlignment
A0A5A7VFJ2 Retrotransposon protein3.2e-1047.31Show/hide
Query:  MGRFSETFADIGSNKPLSMSGLTCRMRTISYLCV-AKELTCSRRMYTHHKLLVRQSGRSSELKRKRGSQREGKIEVIHMTLECTNDQLMTIAE
        MGRF+ETF D+GSN+P+   G         +  V ++ +  S++     +      GR    KRKRGSQ+EG+IEVIHM LECTN+QLMTIAE
Subjt:  MGRFSETFADIGSNKPLSMSGLTCRMRTISYLCV-AKELTCSRRMYTHHKLLVRQSGRSSELKRKRGSQREGKIEVIHMTLECTNDQLMTIAE

A0A5A7VKA9 Retrotransposon protein2.4e-1046.39Show/hide
Query:  RFSETFADIGSNKPLSMSGLTCRMRTISYLCVAKE-LTCSRRMYTHHKLLVRQSGR--SSELKRKRGSQREGKIEVIHMTLECTNDQLMTIAEWSAQ
        RF ETF D+ SN+P+   G         +  +  + +  S++     +      GR  SS LKRKRGSQREGKIEVIHM LEC NDQ  TIAEW A+
Subjt:  RFSETFADIGSNKPLSMSGLTCRMRTISYLCVAKE-LTCSRRMYTHHKLLVRQSGR--SSELKRKRGSQREGKIEVIHMTLECTNDQLMTIAEWSAQ

A0A5D3C2G6 Retrotransposon protein2.7e-49100Show/hide
Query:  MGRFSETFADIGSNKPLSMSGLTCRMRTISYLCVAKELTCSRRMYTHHKLLVRQSGRSSELKRKRGSQREGKIEVIHMTLECTNDQLMTIAEWSAQRPCQ
        MGRFSETFADIGSNKPLSMSGLTCRMRTISYLCVAKELTCSRRMYTHHKLLVRQSGRSSELKRKRGSQREGKIEVIHMTLECTNDQLMTIAEWSAQRPCQ
Subjt:  MGRFSETFADIGSNKPLSMSGLTCRMRTISYLCVAKELTCSRRMYTHHKLLVRQSGRSSELKRKRGSQREGKIEVIHMTLECTNDQLMTIAEWSAQRPCQ

A0A5D3CLE8 Retrotransposon protein3.7e-1146.39Show/hide
Query:  GRFSETFADIGSNKPLSMSGLTCRMRTISYLCVAKE-LTCSRRMYTHHKLLVRQSGR--SSELKRKRGSQREGKIEVIHMTLECTNDQLMTIAEWSA
        GRF ETF D+GSN+P    G         +  V  + +  S+      +  +   GR  SSELK KRG+Q+EG++EVIHM LECTND L TIAEW A
Subjt:  GRFSETFADIGSNKPLSMSGLTCRMRTISYLCVAKE-LTCSRRMYTHHKLLVRQSGR--SSELKRKRGSQREGKIEVIHMTLECTNDQLMTIAEWSA

A0A5D3CUK6 Retrotransposon protein2.4e-1046.39Show/hide
Query:  RFSETFADIGSNKPLSMSGLTCRMRTISYLCVAKE-LTCSRRMYTHHKLLVRQSGR--SSELKRKRGSQREGKIEVIHMTLECTNDQLMTIAEWSAQ
        RF ETF D+ SN+P+   G         +  +  + +  S++     +      GR  SS LKRKRGSQREGKIEVIHM LEC NDQ  TIAEW A+
Subjt:  RFSETFADIGSNKPLSMSGLTCRMRTISYLCVAKE-LTCSRRMYTHHKLLVRQSGR--SSELKRKRGSQREGKIEVIHMTLECTNDQLMTIAEWSAQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCGCTTCTCTGAGACATTCGCCGATATTGGATCTAACAAGCCATTGAGTATGAGTGGTTTGACATGCCGGATGAGAACGATTTCCTATCTATGTGTAGCTAAGGA
ATTGACATGTTCTAGGAGGATGTACACACATCACAAACTTCTCGTACGTCAGAGTGGCCGATCGAGCGAATTGAAGAGGAAGAGGGGAAGCCAGCGAGAGGGCAAGATTG
AAGTCATACATATGACCCTCGAGTGTACCAATGACCAACTCATGACGATTGCCGAGTGGTCTGCACAACGCCCTTGCCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTCGCTTCTCTGAGACATTCGCCGATATTGGATCTAACAAGCCATTGAGTATGAGTGGTTTGACATGCCGGATGAGAACGATTTCCTATCTATGTGTAGCTAAGGA
ATTGACATGTTCTAGGAGGATGTACACACATCACAAACTTCTCGTACGTCAGAGTGGCCGATCGAGCGAATTGAAGAGGAAGAGGGGAAGCCAGCGAGAGGGCAAGATTG
AAGTCATACATATGACCCTCGAGTGTACCAATGACCAACTCATGACGATTGCCGAGTGGTCTGCACAACGCCCTTGCCAATGA
Protein sequenceShow/hide protein sequence
MGRFSETFADIGSNKPLSMSGLTCRMRTISYLCVAKELTCSRRMYTHHKLLVRQSGRSSELKRKRGSQREGKIEVIHMTLECTNDQLMTIAEWSAQRPCQ