CuGenDBv2

Gene ID	MELO3C020141
Organism	Cucumis melo DHL92 (Melon (DHL92) v4)
Description	40S ribosomal protein S26
Genome location	chr10:13049638..13052736
RNA-Seq Expression	MELO3C020141
Synteny	MELO3C020141
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0019430 - removal of superoxide radicals (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0022627 - cytosolic small ribosomal subunit (cellular component) GO:0003729 - mRNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function) GO:0004784 - superoxide dismutase activity (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR000892 - Ribosomal protein S26e IPR038551 - Ribosomal protein S26e superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6599946.1 40S ribosomal protein S26-1, partial [Cucurbita argyrosperma subsp. sororia]

8.9e-64

93.33

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAK------PGQPGQAPRPVGAGNPARV
        F+RRR+DQ K      PGQPGQAPRPVGAGNPARV
Subjt:  FIRRREDQAK------PGQPGQAPRPVGAGNPARV

XP_004146441.1 40S ribosomal protein S26-1 [Cucumis sativus]

6.6e-67

100

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPVGAGNPARV
        FIRRREDQAKPGQPGQAPRPVGAGNPARV
Subjt:  FIRRREDQAKPGQPGQAPRPVGAGNPARV

XP_022941874.1 40S ribosomal protein S26-3-like [Cucurbita moschata]

4.0e-64

95.45

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAK---PGQPGQAPRPVGAGNPARV
        F+RRR+DQ K   PGQPGQAPRPVGAGNPARV
Subjt:  FIRRREDQAK---PGQPGQAPRPVGAGNPARV

XP_022943123.1 40S ribosomal protein S26-1-like [Cucurbita moschata]

1.8e-64

96.9

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPVGAGNPARV
        FIRRR+DQ KPGQPGQAPRP GAG PARV
Subjt:  FIRRREDQAKPGQPGQAPRPVGAGNPARV

XP_023529394.1 40S ribosomal protein S26-1-like [Cucurbita pepo subsp. pepo]

1.8e-64

96.9

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPVGAGNPARV
        FIRRR+DQ KPGQPGQAPRP GAG PARV
Subjt:  FIRRREDQAKPGQPGQAPRPVGAGNPARV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KM45 40S ribosomal protein S26

3.2e-67

100

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPVGAGNPARV
        FIRRREDQAKPGQPGQAPRPVGAGNPARV
Subjt:  FIRRREDQAKPGQPGQAPRPVGAGNPARV

A0A1S3C5M1 40S ribosomal protein S26

3.2e-67

100

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPVGAGNPARV
        FIRRREDQAKPGQPGQAPRPVGAGNPARV
Subjt:  FIRRREDQAKPGQPGQAPRPVGAGNPARV

A0A5A7VIJ0 40S ribosomal protein S26

3.2e-67

100

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPVGAGNPARV
        FIRRREDQAKPGQPGQAPRPVGAGNPARV
Subjt:  FIRRREDQAKPGQPGQAPRPVGAGNPARV

A0A6J1FWD9 40S ribosomal protein S26

8.7e-65

96.9

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPVGAGNPARV
        FIRRR+DQ KPGQPGQAPRP GAG PARV
Subjt:  FIRRREDQAKPGQPGQAPRPVGAGNPARV

A0A6J1JIN0 40S ribosomal protein S26

8.7e-65

96.9

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPVGAGNPARV
        FIRRR+DQ KPGQPGQAPRP GAG PARV
Subjt:  FIRRREDQAKPGQPGQAPRPVGAGNPARV

SwissProt top hits

e value

%identity

Alignment

O45499 40S ribosomal protein S26

1.7e-38

68.33

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRN GRNK  RGHV FIRC+NCG+CCPKDKAIK+F+VRNIVE AAVRD+ +A  Y QY LPKLY K+ YC++CAIHS VVR RSR  RR+R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRP
        F  +R   A+PG PG  PRP
Subjt:  FIRRREDQAKPGQPGQAPRP

P49206 40S ribosomal protein S26-1

1.0e-54

83.46

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPVGAGNPA
        F RR+ED  KPGQPGQAPRP G G  A
Subjt:  FIRRREDQAKPGQPGQAPRPVGAGNPA

P49216 40S ribosomal protein S26

6.4e-49

76.56

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKHGRGHVK+IRCSNC KCCPKDKAIKRF VRNIVEQAA+RDVQEACV+D Y LPKLYAK+ +CVSCAIH+H+VRVRSR +RR+R+PP+R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQP-GQAPRPVGAGNPA
        F RRRED+ +  +P G AP P GA  PA
Subjt:  FIRRREDQAKPGQP-GQAPRPVGAGNPA

Q8LPJ7 40S ribosomal protein S26-2

1.0e-54

83.46

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPVGAGNPA
        F RR+ED  KPGQPGQAPRP G G  A
Subjt:  FIRRREDQAKPGQPGQAPRPVGAGNPA

Q9LYK9 40S ribosomal protein S26-3

3.0e-54

84.25

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKH RGHVK IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPVGAGNPA
        F RR+ED  KP QPGQAPRP G G PA
Subjt:  FIRRREDQAKPGQPGQAPRPVGAGNPA

Arabidopsis top hits

e value

%identity

Alignment

AT2G40510.1 Ribosomal protein S26e family protein

7.3e-56

83.46

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPVGAGNPA
        F RR+ED  KPGQPGQAPRP G G  A
Subjt:  FIRRREDQAKPGQPGQAPRPVGAGNPA

AT2G40590.1 Ribosomal protein S26e family protein

7.3e-56

83.46

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPVGAGNPA
        F RR+ED  KPGQPGQAPRP G G  A
Subjt:  FIRRREDQAKPGQPGQAPRPVGAGNPA

AT3G56340.1 Ribosomal protein S26e family protein

2.1e-55

84.25

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR
        MTFKRRNGGRNKH RGHVK IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQR

Query:  FIRRREDQAKPGQPGQAPRPVGAGNPA
        F RR+ED  KP QPGQAPRP G G PA
Subjt:  FIRRREDQAKPGQPGQAPRPVGAGNPA

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

mRNA sequence

Show/hide mRNA sequence

CTTAAAAGGGTTTTATTTTTTGCAATTTTACTTTTTTATTTGTTGGTTTGGTTCGGCGGGACCGGAGATCTATATAAAGCGTTTACCGGTACGAATCTTCTATATCTCAC
GCTCAGCCTTTGCCCACACAAAACCCTAATCGGCTGCCTCTCTCTCTCTGCTTCATTGAAGATCTCCAACTTTGTAACGATGACTTTCAAGCGCAGGAACGGCGGACGCA
ACAAGCACGGCCGTGGACACGTTAAGTTCATTCGGTGCTCCAACTGCGGGAAATGCTGTCCTAAGGACAAGGCTATTAAGAGGTTTCTCGTGAGGAATATTGTGGAGCAG
GCTGCTGTCAGGGATGTTCAAGAAGCCTGTGTCTATGACCAATATACTCTTCCTAAGCTTTATGCTAAGATGCAGTACTGTGTTTCCTGTGCTATTCACTCACATGTTGT
GCGAGTTCGATCTCGCACTGATAGAAGAAATCGGCAACCACCACAGCGTTTCATCAGACGCAGGGAGGATCAGGCAAAGCCCGGTCAGCCAGGTCAAGCACCTCGTCCTG
TTGGAGCCGGAAATCCTGCTCGTGTATAAAAGAAACCTTTTCATGGCTTCTACGAGTAAGTCGTAGGGATCTTTTATAGGCACTCTTTTATAGTTTGGTTGTTTCTTATG
TGGATGAAAGTGAATTTTTGAATCAATATGGAAACAAACTTATCTGAGAATTTTGCAACTTTGGAATGAGCTAAAGACCGGTAATTGAGTTATCCAATGAGTTTTCTTCA
CTTTCTTGTTTGGATTGGATTTTCTCCCATTTTCTAACGATATGGATTACGTCTGACCTTTTGGTCGAGATTTTATTTATGTCAGTTGGCCAGATTGTTTGGTTTTTCCT
AATACGTATTGGAGGGGAAAACTAGAAAACATAAAATTAGATCAATGGGGAAAGAACTCCATGACATTAATTTTACCCAACAGGTAAGGTTATGGATACTATTCTTATTA
ATTTTTAGTCATATTCAAAGGTTAAGATAATGTTGAT

Protein sequence

Show/hide protein sequence

LKRVLFFAILLFYLLVWFGGTGDLYKAFTGTNLLYLTLSLCPHKTLIGCLSLSASLKISNFVTMTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQ
AAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRNRQPPQRFIRRREDQAKPGQPGQAPRPVGAGNPARV

MELO3C020141 (gene) of Melon (DHL92) v4 genome