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MELO3C020165 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C020165
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionRetrotransposon protein
Genome locationchr10:13454204..13454638
RNA-Seq ExpressionMELO3C020165
SyntenyMELO3C020165
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033884.1 retrotransposon protein [Cucumis melo var. makuwa]6.5e-4362.5Show/hide
Query:  MQTHPVAKGLLNKSFSYYDELAYVFGRDRVMGHFVETFIDVGSNDPSWYEGFQTTDGNDKEFPSMYSQGFDMSQDDVRASHPACTSECRTGSNGSKQRRE
        +++HP AK LLNK FSYYDELAYVF  DR  G FVETF D+GSN+P+ YEGF  +DGND EFP MYSQG D+SQDDVR S PACTS+ R  S+ SK++R 
Subjt:  MQTHPVAKGLLNKSFSYYDELAYVFGRDRVMGHFVETFIDVGSNDPSWYEGFQTTDGNDKEFPSMYSQGFDMSQDDVRASHPACTSECRTGSNGSKQRRE

Query:  GQWVGEIEMIHEALECENDQLRMIAEWPSRTLQNETTIFQEVLR
         Q  GE+++I+ AL+C NDQLR I EWP+R   NET + QE LR
Subjt:  GQWVGEIEMIHEALECENDQLRMIAEWPSRTLQNETTIFQEVLR

KAA0050190.1 retrotransposon protein [Cucumis melo var. makuwa]1.4e-4265.49Show/hide
Query:  THPVAKGLLNKSFSYYDELAYVFGRDRVMGHFVETFIDVGSNDPSWYEGFQTTDGNDKEFPSMYSQGFDMSQDDVRASHPACTSECRTGSNGSKQRREGQ
        +HP AKGL NK F YYDELAYVFG DR+M  FV+TF DVGSN P  Y+ F   DGN+ EFPSMYSQG DMSQ+DVRAS P+ TS+ R  S+GSK++RE Q
Subjt:  THPVAKGLLNKSFSYYDELAYVFGRDRVMGHFVETFIDVGSNDPSWYEGFQTTDGNDKEFPSMYSQGFDMSQDDVRASHPACTSECRTGSNGSKQRREGQ

Query:  WVGEIEMIHEALECENDQLRMIAEWPSRTLQNETTIFQEVLR
          GEIE+IH A+EC NDQLR IAEWP+R L N+T + QE+LR
Subjt:  WVGEIEMIHEALECENDQLRMIAEWPSRTLQNETTIFQEVLR

KAA0055946.1 retrotransposon protein [Cucumis melo var. makuwa]2.4e-4567.39Show/hide
Query:  MQTHPVAKGLLNKSFSYYDELAYVFGRDRVMGHFVETFIDVGSNDPSWYEGFQTTDGNDKEFPSMYSQGFDMSQDDVRASHPACTSECRTGSNGSKQRRE
        MQ+HP AKGLLNK FSYYDELAYVF RDR  G F ETF+D+ SN+ + YEGF  +D ND EFP MYSQ   MSQDDVRAS P   S+ RTGS+GSK++RE
Subjt:  MQTHPVAKGLLNKSFSYYDELAYVFGRDRVMGHFVETFIDVGSNDPSWYEGFQTTDGNDKEFPSMYSQGFDMSQDDVRASHPACTSECRTGSNGSKQRRE

Query:  GQWVGEIEMIHEALECENDQLRMIAEWPSRTLQNETTI
         QW GEIEMIH ALEC NDQLR I EW +R L N+TT+
Subjt:  GQWVGEIEMIHEALECENDQLRMIAEWPSRTLQNETTI

KAA0065782.1 retrotransposon protein [Cucumis melo var. makuwa]6.7e-4060.43Show/hide
Query:  THPVAKGLLNKSFSYYDELAYVFGRDRVMGHFVETFIDVGSNDPSWYEGFQTTDGNDKEFPSMYSQGFDMSQDDVRASHPACTSECRTGSNGSKQRREGQ
        +HPV KGLLNK F +YDEL YVFGRDR  GHF ETF DVGSN+P  YEGF   DGN KEFPS+Y+QG +MSQ+DVRAS P+   E R GS+GSK++R  Q
Subjt:  THPVAKGLLNKSFSYYDELAYVFGRDRVMGHFVETFIDVGSNDPSWYEGFQTTDGNDKEFPSMYSQGFDMSQDDVRASHPACTSECRTGSNGSKQRREGQ

Query:  WVGEIEMIHEALECENDQLRMIAEWPSRTLQNETTIFQE
           E+E+I+ A EC NDQL+++AEWP+R L N+  + Q+
Subjt:  WVGEIEMIHEALECENDQLRMIAEWPSRTLQNETTIFQE

KAA0067019.1 retrotransposon protein [Cucumis melo var. makuwa]1.6e-78100Show/hide
Query:  MQTHPVAKGLLNKSFSYYDELAYVFGRDRVMGHFVETFIDVGSNDPSWYEGFQTTDGNDKEFPSMYSQGFDMSQDDVRASHPACTSECRTGSNGSKQRRE
        MQTHPVAKGLLNKSFSYYDELAYVFGRDRVMGHFVETFIDVGSNDPSWYEGFQTTDGNDKEFPSMYSQGFDMSQDDVRASHPACTSECRTGSNGSKQRRE
Subjt:  MQTHPVAKGLLNKSFSYYDELAYVFGRDRVMGHFVETFIDVGSNDPSWYEGFQTTDGNDKEFPSMYSQGFDMSQDDVRASHPACTSECRTGSNGSKQRRE

Query:  GQWVGEIEMIHEALECENDQLRMIAEWPSRTLQNETTIFQEVLR
        GQWVGEIEMIHEALECENDQLRMIAEWPSRTLQNETTIFQEVLR
Subjt:  GQWVGEIEMIHEALECENDQLRMIAEWPSRTLQNETTIFQEVLR

TrEMBL top hitse value%identityAlignment
A0A5A7U4I8 Retrotransposon protein7.0e-4365.49Show/hide
Query:  THPVAKGLLNKSFSYYDELAYVFGRDRVMGHFVETFIDVGSNDPSWYEGFQTTDGNDKEFPSMYSQGFDMSQDDVRASHPACTSECRTGSNGSKQRREGQ
        +HP AKGL NK F YYDELAYVFG DR+M  FV+TF DVGSN P  Y+ F   DGN+ EFPSMYSQG DMSQ+DVRAS P+ TS+ R  S+GSK++RE Q
Subjt:  THPVAKGLLNKSFSYYDELAYVFGRDRVMGHFVETFIDVGSNDPSWYEGFQTTDGNDKEFPSMYSQGFDMSQDDVRASHPACTSECRTGSNGSKQRREGQ

Query:  WVGEIEMIHEALECENDQLRMIAEWPSRTLQNETTIFQEVLR
          GEIE+IH A+EC NDQLR IAEWP+R L N+T + QE+LR
Subjt:  WVGEIEMIHEALECENDQLRMIAEWPSRTLQNETTIFQEVLR

A0A5D3BD15 Retrotransposon protein3.2e-4060.43Show/hide
Query:  THPVAKGLLNKSFSYYDELAYVFGRDRVMGHFVETFIDVGSNDPSWYEGFQTTDGNDKEFPSMYSQGFDMSQDDVRASHPACTSECRTGSNGSKQRREGQ
        +HPV KGLLNK F +YDEL YVFGRDR  GHF ETF DVGSN+P  YEGF   DGN KEFPS+Y+QG +MSQ+DVRAS P+   E R GS+GSK++R  Q
Subjt:  THPVAKGLLNKSFSYYDELAYVFGRDRVMGHFVETFIDVGSNDPSWYEGFQTTDGNDKEFPSMYSQGFDMSQDDVRASHPACTSECRTGSNGSKQRREGQ

Query:  WVGEIEMIHEALECENDQLRMIAEWPSRTLQNETTIFQE
           E+E+I+ A EC NDQL+++AEWP+R L N+  + Q+
Subjt:  WVGEIEMIHEALECENDQLRMIAEWPSRTLQNETTIFQE

A0A5D3BQI7 Retrotransposon protein3.1e-4362.5Show/hide
Query:  MQTHPVAKGLLNKSFSYYDELAYVFGRDRVMGHFVETFIDVGSNDPSWYEGFQTTDGNDKEFPSMYSQGFDMSQDDVRASHPACTSECRTGSNGSKQRRE
        +++HP AK LLNK FSYYDELAYVF  DR  G FVETF D+GSN+P+ YEGF  +DGND EFP MYSQG D+SQDDVR S PACTS+ R  S+ SK++R 
Subjt:  MQTHPVAKGLLNKSFSYYDELAYVFGRDRVMGHFVETFIDVGSNDPSWYEGFQTTDGNDKEFPSMYSQGFDMSQDDVRASHPACTSECRTGSNGSKQRRE

Query:  GQWVGEIEMIHEALECENDQLRMIAEWPSRTLQNETTIFQEVLR
         Q  GE+++I+ AL+C NDQLR I EWP+R   NET + QE LR
Subjt:  GQWVGEIEMIHEALECENDQLRMIAEWPSRTLQNETTIFQEVLR

A0A5D3DS68 Retrotransposon protein7.9e-79100Show/hide
Query:  MQTHPVAKGLLNKSFSYYDELAYVFGRDRVMGHFVETFIDVGSNDPSWYEGFQTTDGNDKEFPSMYSQGFDMSQDDVRASHPACTSECRTGSNGSKQRRE
        MQTHPVAKGLLNKSFSYYDELAYVFGRDRVMGHFVETFIDVGSNDPSWYEGFQTTDGNDKEFPSMYSQGFDMSQDDVRASHPACTSECRTGSNGSKQRRE
Subjt:  MQTHPVAKGLLNKSFSYYDELAYVFGRDRVMGHFVETFIDVGSNDPSWYEGFQTTDGNDKEFPSMYSQGFDMSQDDVRASHPACTSECRTGSNGSKQRRE

Query:  GQWVGEIEMIHEALECENDQLRMIAEWPSRTLQNETTIFQEVLR
        GQWVGEIEMIHEALECENDQLRMIAEWPSRTLQNETTIFQEVLR
Subjt:  GQWVGEIEMIHEALECENDQLRMIAEWPSRTLQNETTIFQEVLR

A0A5D3DXB2 Retrotransposon protein1.2e-4567.39Show/hide
Query:  MQTHPVAKGLLNKSFSYYDELAYVFGRDRVMGHFVETFIDVGSNDPSWYEGFQTTDGNDKEFPSMYSQGFDMSQDDVRASHPACTSECRTGSNGSKQRRE
        MQ+HP AKGLLNK FSYYDELAYVF RDR  G F ETF+D+ SN+ + YEGF  +D ND EFP MYSQ   MSQDDVRAS P   S+ RTGS+GSK++RE
Subjt:  MQTHPVAKGLLNKSFSYYDELAYVFGRDRVMGHFVETFIDVGSNDPSWYEGFQTTDGNDKEFPSMYSQGFDMSQDDVRASHPACTSECRTGSNGSKQRRE

Query:  GQWVGEIEMIHEALECENDQLRMIAEWPSRTLQNETTI
         QW GEIEMIH ALEC NDQLR I EW +R L N+TT+
Subjt:  GQWVGEIEMIHEALECENDQLRMIAEWPSRTLQNETTI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAACACATCCTGTAGCAAAGGGCCTCCTTAACAAATCGTTTTCCTATTACGACGAACTTGCATATGTGTTTGGGAGGGATAGGGTGATGGGTCACTTTGTAGAGAC
GTTCATCGATGTCGGGTCCAATGACCCTAGCTGGTACGAAGGGTTTCAAACGACTGATGGAAACGATAAGGAGTTCCCCAGCATGTACAGTCAGGGGTTTGACATGTCCC
AGGATGATGTACGTGCTTCACACCCTGCTTGCACATCGGAGTGTAGGACCGGATCGAATGGATCAAAGCAACGAAGGGAAGGGCAGTGGGTAGGTGAGATTGAGATGATA
CATGAGGCGCTGGAGTGTGAGAATGACCAGCTGAGGATGATTGCAGAGTGGCCTTCCCGCACGCTGCAGAATGAAACCACAATTTTCCAGGAAGTTCTACGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAAACACATCCTGTAGCAAAGGGCCTCCTTAACAAATCGTTTTCCTATTACGACGAACTTGCATATGTGTTTGGGAGGGATAGGGTGATGGGTCACTTTGTAGAGAC
GTTCATCGATGTCGGGTCCAATGACCCTAGCTGGTACGAAGGGTTTCAAACGACTGATGGAAACGATAAGGAGTTCCCCAGCATGTACAGTCAGGGGTTTGACATGTCCC
AGGATGATGTACGTGCTTCACACCCTGCTTGCACATCGGAGTGTAGGACCGGATCGAATGGATCAAAGCAACGAAGGGAAGGGCAGTGGGTAGGTGAGATTGAGATGATA
CATGAGGCGCTGGAGTGTGAGAATGACCAGCTGAGGATGATTGCAGAGTGGCCTTCCCGCACGCTGCAGAATGAAACCACAATTTTCCAGGAAGTTCTACGCTAG
Protein sequenceShow/hide protein sequence
MQTHPVAKGLLNKSFSYYDELAYVFGRDRVMGHFVETFIDVGSNDPSWYEGFQTTDGNDKEFPSMYSQGFDMSQDDVRASHPACTSECRTGSNGSKQRREGQWVGEIEMI
HEALECENDQLRMIAEWPSRTLQNETTIFQEVLR