; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C020937 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C020937
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionCACTA en-spm transposon protein
Genome locationchr11:2739838..2740920
RNA-Seq ExpressionMELO3C020937
SyntenyMELO3C020937
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045869.1 uncharacterized protein E6C27_scaffold243G004050 [Cucumis melo var. makuwa]5.4e-88100Show/hide
Query:  MSVENTLISDAIKGISPRFRAASGDLLYKRFSSVLYRTENEKERRREKRRFVAVRSSPSSVPSSLSSLTAICHLRGQPLSEDEICDQVLGRRPGYSKGLG
        MSVENTLISDAIKGISPRFRAASGDLLYKRFSSVLYRTENEKERRREKRRFVAVRSSPSSVPSSLSSLTAICHLRGQPLSEDEICDQVLGRRPGYSKGLG
Subjt:  MSVENTLISDAIKGISPRFRAASGDLLYKRFSSVLYRTENEKERRREKRRFVAVRSSPSSVPSSLSSLTAICHLRGQPLSEDEICDQVLGRRPGYSKGLG

Query:  WGSKSKVRRTTSASSSSTSCPQSTQKEIELQAKVNETLERIEVQDRNHQTLASQVERMQKLIEDFTCAQQGPPRDS
        WGSKSKVRRTTSASSSSTSCPQSTQKEIELQAKVNETLERIEVQDRNHQTLASQVERMQKLIEDFTCAQQGPPRDS
Subjt:  WGSKSKVRRTTSASSSSTSCPQSTQKEIELQAKVNETLERIEVQDRNHQTLASQVERMQKLIEDFTCAQQGPPRDS

KAA0046652.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]1.5e-3786.87Show/hide
Query:  QPLSEDEICDQVLGRRPGYSKGLGWGSKSKVRRTTSASSSSTSCPQSTQKEIELQAKVNETLERIEVQDRNHQTLASQVERMQKLIEDFTCAQQGPPRD
        QPLSEDEICDQVLGRRPGYSKGLGWG K K RRT SASSSSTSC QSTQKEIELQAK++ETLERIEVQDRNHQ LASQVE M+K+IED TCAQQGPP D
Subjt:  QPLSEDEICDQVLGRRPGYSKGLGWGSKSKVRRTTSASSSSTSCPQSTQKEIELQAKVNETLERIEVQDRNHQTLASQVERMQKLIEDFTCAQQGPPRD

KAA0050124.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]1.3e-3685Show/hide
Query:  QPLSEDEICDQVLGRRPGYSKGLGWGSKSKVRRTTSASSSSTSCPQSTQKEIELQAKVNETLERIEVQDRNHQTLASQVERMQKLIEDFTCAQQGPPRDS
        QPLSEDEICDQVLGRRPGYSKGLGWG K K RRT SASSSSTSC QSTQKEIELQAK++E LERIEVQDRNHQ LASQVE M+K+IED T AQQGPP DS
Subjt:  QPLSEDEICDQVLGRRPGYSKGLGWGSKSKVRRTTSASSSSTSCPQSTQKEIELQAKVNETLERIEVQDRNHQTLASQVERMQKLIEDFTCAQQGPPRDS

KAA0057465.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]2.2e-3683.17Show/hide
Query:  RGQPLSEDEICDQVLGRRPGYSKGLGWGSKSKVRRTTSASSSSTSCPQSTQKEIELQAKVNETLERIEVQDRNHQTLASQVERMQKLIEDFTCAQQGPPR
        + QPLSEDEICDQVLGRRPGYSKGLGWG K K RRT SASSSSTSC QSTQKEIELQAK++E LERIEVQDRNHQ LASQVE M+K+IED T AQQGPP 
Subjt:  RGQPLSEDEICDQVLGRRPGYSKGLGWGSKSKVRRTTSASSSSTSCPQSTQKEIELQAKVNETLERIEVQDRNHQTLASQVERMQKLIEDFTCAQQGPPR

Query:  D
        D
Subjt:  D

TYK11644.1 zinc finger protein ZPR1-like protein [Cucumis melo var. makuwa]1.3e-3653.14Show/hide
Query:  MHSVSGTTSGIRVFSTHY------CASKKPFMSVENTLISDAIKGISPRFRAASGDLLYKRFSSVLYRTENEKERRREKRRFVAVRSSPSSVPSSLSSLT
        +++ SG  SG   F TH        + K  F    N+  S A  GI  R R                  E  KE+++    F      P S  S   S  
Subjt:  MHSVSGTTSGIRVFSTHY------CASKKPFMSVENTLISDAIKGISPRFRAASGDLLYKRFSSVLYRTENEKERRREKRRFVAVRSSPSSVPSSLSSLT

Query:  AICHLRG-QPLSEDEICDQVLGRRPGYSKGLGWGSKSKVRRTTSASSSSTSCPQSTQKEIELQAKVNETLERIEVQDRNHQTLASQVERMQKLIEDFTCA
            L G QPLSEDEICDQVLGRRPGYSKGLGWG KSK RRT SASSSSTSC QSTQKEIELQAK++E LERIEVQDRNHQ LASQVE M+K+IED T A
Subjt:  AICHLRG-QPLSEDEICDQVLGRRPGYSKGLGWGSKSKVRRTTSASSSSTSCPQSTQKEIELQAKVNETLERIEVQDRNHQTLASQVERMQKLIEDFTCA

Query:  QQGPPRD
        QQ PP D
Subjt:  QQGPPRD

TrEMBL top hitse value%identityAlignment
A0A5A7TT95 CACTA en-spm transposon protein7.2e-3886.87Show/hide
Query:  QPLSEDEICDQVLGRRPGYSKGLGWGSKSKVRRTTSASSSSTSCPQSTQKEIELQAKVNETLERIEVQDRNHQTLASQVERMQKLIEDFTCAQQGPPRD
        QPLSEDEICDQVLGRRPGYSKGLGWG K K RRT SASSSSTSC QSTQKEIELQAK++ETLERIEVQDRNHQ LASQVE M+K+IED TCAQQGPP D
Subjt:  QPLSEDEICDQVLGRRPGYSKGLGWGSKSKVRRTTSASSSSTSCPQSTQKEIELQAKVNETLERIEVQDRNHQTLASQVERMQKLIEDFTCAQQGPPRD

A0A5A7U4G4 CACTA en-spm transposon protein6.1e-3785Show/hide
Query:  QPLSEDEICDQVLGRRPGYSKGLGWGSKSKVRRTTSASSSSTSCPQSTQKEIELQAKVNETLERIEVQDRNHQTLASQVERMQKLIEDFTCAQQGPPRDS
        QPLSEDEICDQVLGRRPGYSKGLGWG K K RRT SASSSSTSC QSTQKEIELQAK++E LERIEVQDRNHQ LASQVE M+K+IED T AQQGPP DS
Subjt:  QPLSEDEICDQVLGRRPGYSKGLGWGSKSKVRRTTSASSSSTSCPQSTQKEIELQAKVNETLERIEVQDRNHQTLASQVERMQKLIEDFTCAQQGPPRDS

A0A5A7UV96 Pentatricopeptide repeat-containing protein1.0e-3683.17Show/hide
Query:  RGQPLSEDEICDQVLGRRPGYSKGLGWGSKSKVRRTTSASSSSTSCPQSTQKEIELQAKVNETLERIEVQDRNHQTLASQVERMQKLIEDFTCAQQGPPR
        + QPLSEDEICDQVLGRRPGYSKGLGWG K K RRT SASSSSTSC QSTQKEIELQAK++E LERIEVQDRNHQ LASQVE M+K+IED T AQQGPP 
Subjt:  RGQPLSEDEICDQVLGRRPGYSKGLGWGSKSKVRRTTSASSSSTSCPQSTQKEIELQAKVNETLERIEVQDRNHQTLASQVERMQKLIEDFTCAQQGPPR

Query:  D
        D
Subjt:  D

A0A5D3CKF2 Zinc finger protein ZPR1-like protein6.1e-3753.14Show/hide
Query:  MHSVSGTTSGIRVFSTHY------CASKKPFMSVENTLISDAIKGISPRFRAASGDLLYKRFSSVLYRTENEKERRREKRRFVAVRSSPSSVPSSLSSLT
        +++ SG  SG   F TH        + K  F    N+  S A  GI  R R                  E  KE+++    F      P S  S   S  
Subjt:  MHSVSGTTSGIRVFSTHY------CASKKPFMSVENTLISDAIKGISPRFRAASGDLLYKRFSSVLYRTENEKERRREKRRFVAVRSSPSSVPSSLSSLT

Query:  AICHLRG-QPLSEDEICDQVLGRRPGYSKGLGWGSKSKVRRTTSASSSSTSCPQSTQKEIELQAKVNETLERIEVQDRNHQTLASQVERMQKLIEDFTCA
            L G QPLSEDEICDQVLGRRPGYSKGLGWG KSK RRT SASSSSTSC QSTQKEIELQAK++E LERIEVQDRNHQ LASQVE M+K+IED T A
Subjt:  AICHLRG-QPLSEDEICDQVLGRRPGYSKGLGWGSKSKVRRTTSASSSSTSCPQSTQKEIELQAKVNETLERIEVQDRNHQTLASQVERMQKLIEDFTCA

Query:  QQGPPRD
        QQ PP D
Subjt:  QQGPPRD

A0A5D3CU45 Uncharacterized protein2.6e-88100Show/hide
Query:  MSVENTLISDAIKGISPRFRAASGDLLYKRFSSVLYRTENEKERRREKRRFVAVRSSPSSVPSSLSSLTAICHLRGQPLSEDEICDQVLGRRPGYSKGLG
        MSVENTLISDAIKGISPRFRAASGDLLYKRFSSVLYRTENEKERRREKRRFVAVRSSPSSVPSSLSSLTAICHLRGQPLSEDEICDQVLGRRPGYSKGLG
Subjt:  MSVENTLISDAIKGISPRFRAASGDLLYKRFSSVLYRTENEKERRREKRRFVAVRSSPSSVPSSLSSLTAICHLRGQPLSEDEICDQVLGRRPGYSKGLG

Query:  WGSKSKVRRTTSASSSSTSCPQSTQKEIELQAKVNETLERIEVQDRNHQTLASQVERMQKLIEDFTCAQQGPPRDS
        WGSKSKVRRTTSASSSSTSCPQSTQKEIELQAKVNETLERIEVQDRNHQTLASQVERMQKLIEDFTCAQQGPPRDS
Subjt:  WGSKSKVRRTTSASSSSTSCPQSTQKEIELQAKVNETLERIEVQDRNHQTLASQVERMQKLIEDFTCAQQGPPRDS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACAGTGTATCGGGAACGACGTCGGGAATAAGGGTTTTCTCGACACACTATTGCGCGTCGAAAAAACCTTTTATGAGCGTCGAGAATACCCTTATTTCCGAC
GCCATAAAGGGGATCTCCCCACGTTTTCGTGCTGCGTCGGGAGATCTCCTTTATAAACGTTTCAGTTCTGTATTATACAGAACTGAAAACGAAAAGGAAAGGAGA
AGAGAGAAACGAAGATTCGTCGCCGTCCGTAGCTCGCCGTCATCTGTTCCGTCGTCATTGTCGTCCCTCACCGCCATCTGCCATCTTAGGGGTCAGCCACTCTCT
GAGGATGAGATATGCGATCAGGTGTTAGGTAGACGACCAGGCTACTCAAAAGGCCTTGGTTGGGGATCCAAGTCAAAGGTCCGCAGGACGACGAGTGCGAGCAGT
TCCTCGACATCTTGTCCGCAATCTACACAAAAAGAAATTGAATTACAAGCTAAGGTTAATGAAACTTTGGAACGGATTGAAGTGCAAGATAGAAATCACCAAACG
TTAGCTTCACAAGTGGAACGAATGCAAAAGCTGATAGAAGACTTCACTTGTGCACAACAGGGGCCACCACGTGATTCCTAG
mRNA sequenceShow/hide mRNA sequence
GAGAAAACTCTATTCCCGATGCCATGCACCATCGTTGGGAGTGGTGTCGGGAAAAAGGATATTCTCGATGCGTCAAGCACGCGTCGGCCAAATGGTGTCGGGAAT
AAGGCTAAATTAAATTTAAAATACACCTTATTCCCGATGCCATGCACAGTGTATCGGGAACGACGTCGGGAATAAGGGTTTTCTCGACACACTATTGCGCGTCGA
AAAAACCTTTTATGAGCGTCGAGAATACCCTTATTTCCGACGCCATAAAGGGGATCTCCCCACGTTTTCGTGCTGCGTCGGGAGATCTCCTTTATAAACGTTTCA
GTTCTGTATTATACAGAACTGAAAACGAAAAGGAAAGGAGAAGAGAGAAACGAAGATTCGTCGCCGTCCGTAGCTCGCCGTCATCTGTTCCGTCGTCATTGTCGT
CCCTCACCGCCATCTGCCATCTTAGGGGTCAGCCACTCTCTGAGGATGAGATATGCGATCAGGTGTTAGGTAGACGACCAGGCTACTCAAAAGGCCTTGGTTGGG
GATCCAAGTCAAAGGTCCGCAGGACGACGAGTGCGAGCAGTTCCTCGACATCTTGTCCGCAATCTACACAAAAAGAAATTGAATTACAAGCTAAGGTTAATGAAA
CTTTGGAACGGATTGAAGTGCAAGATAGAAATCACCAAACGTTAGCTTCACAAGTGGAACGAATGCAAAAGCTGATAGAAGACTTCACTTGTGCACAACAGGGGC
CACCACGTGATTCCTAGCACTACGTA
Protein sequenceShow/hide protein sequence
MHSVSGTTSGIRVFSTHYCASKKPFMSVENTLISDAIKGISPRFRAASGDLLYKRFSSVLYRTENEKERRREKRRFVAVRSSPSSVPSSLSSLTAICHLRGQPLS
EDEICDQVLGRRPGYSKGLGWGSKSKVRRTTSASSSSTSCPQSTQKEIELQAKVNETLERIEVQDRNHQTLASQVERMQKLIEDFTCAQQGPPRDS