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MELO3C021229 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C021229
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
Descriptionnovel plant SNARE 13
Genome locationchr11:28807014..28810784
RNA-Seq ExpressionMELO3C021229
SyntenyMELO3C021229
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138593.1 uncharacterized protein LOC101203713 isoform X1 [Cucumis sativus]1.5e-4494.17Show/hide
Query:  MASSVQRSPQLDQIHGEIRDSFRAIPYTNTPANKRVELFDERGINESTTDDNVQMTSSITSQELNNVGKKIMDDSDPAIDSSKMVVEQTIEMGRQSAFTL
        MASSVQRSP+LDQIHGEIRDSFR IPYTNTPANKRVELFDERGINES+TDDNVQMT SI SQELNNVGKKIMDDSDPAI+SSKMVVEQTIEMGRQSAFTL
Subjt:  MASSVQRSPQLDQIHGEIRDSFRAIPYTNTPANKRVELFDERGINESTTDDNVQMTSSITSQELNNVGKKIMDDSDPAIDSSKMVVEQTIEMGRQSAFTL

Query:  EGQ
        EGQ
Subjt:  EGQ

XP_008458283.1 PREDICTED: uncharacterized protein LOC103497748 isoform X1 [Cucumis melo]8.4e-48100Show/hide
Query:  MASSVQRSPQLDQIHGEIRDSFRAIPYTNTPANKRVELFDERGINESTTDDNVQMTSSITSQELNNVGKKIMDDSDPAIDSSKMVVEQTIEMGRQSAFTL
        MASSVQRSPQLDQIHGEIRDSFRAIPYTNTPANKRVELFDERGINESTTDDNVQMTSSITSQELNNVGKKIMDDSDPAIDSSKMVVEQTIEMGRQSAFTL
Subjt:  MASSVQRSPQLDQIHGEIRDSFRAIPYTNTPANKRVELFDERGINESTTDDNVQMTSSITSQELNNVGKKIMDDSDPAIDSSKMVVEQTIEMGRQSAFTL

Query:  EGQ
        EGQ
Subjt:  EGQ

XP_008458284.1 PREDICTED: uncharacterized protein LOC103497748 isoform X2 [Cucumis melo]3.2e-47100Show/hide
Query:  MASSVQRSPQLDQIHGEIRDSFRAIPYTNTPANKRVELFDERGINESTTDDNVQMTSSITSQELNNVGKKIMDDSDPAIDSSKMVVEQTIEMGRQSAFTL
        MASSVQRSPQLDQIHGEIRDSFRAIPYTNTPANKRVELFDERGINESTTDDNVQMTSSITSQELNNVGKKIMDDSDPAIDSSKMVVEQTIEMGRQSAFTL
Subjt:  MASSVQRSPQLDQIHGEIRDSFRAIPYTNTPANKRVELFDERGINESTTDDNVQMTSSITSQELNNVGKKIMDDSDPAIDSSKMVVEQTIEMGRQSAFTL

Query:  EG
        EG
Subjt:  EG

XP_022959325.1 uncharacterized protein LOC111460335 isoform X1 [Cucurbita moschata]9.3e-3980.58Show/hide
Query:  MASSVQRSPQLDQIHGEIRDSFRAIPYTNTPANKRVELFDERGINESTTDDNVQMTSSITSQELNNVGKKIMDDSDPAIDSSKMVVEQTIEMGRQSAFTL
        MASSVQRSP+LDQIHGE+RDSFR + YTN PAN+RVE+FDERGINE TTDDN+QMTSSITSQEL NVGKK MDD+DPAI+SSKMVVEQT+E+GRQS+ T 
Subjt:  MASSVQRSPQLDQIHGEIRDSFRAIPYTNTPANKRVELFDERGINESTTDDNVQMTSSITSQELNNVGKKIMDDSDPAIDSSKMVVEQTIEMGRQSAFTL

Query:  EGQ
        +GQ
Subjt:  EGQ

XP_038906599.1 uncharacterized protein LOC120092551 isoform X1 [Benincasa hispida]1.4e-4290.29Show/hide
Query:  MASSVQRSPQLDQIHGEIRDSFRAIPYTNTPANKRVELFDERGINESTTDDNVQMTSSITSQELNNVGKKIMDDSDPAIDSSKMVVEQTIEMGRQSAFTL
        MASSVQRSP+LDQIHGEIRDSFRA+PY NTPANKRVELFDERGINESTTDDNVQ+TSSI SQELNNVG+K MDDSDPAI+SSKMVVEQT+EMGRQSAFTL
Subjt:  MASSVQRSPQLDQIHGEIRDSFRAIPYTNTPANKRVELFDERGINESTTDDNVQMTSSITSQELNNVGKKIMDDSDPAIDSSKMVVEQTIEMGRQSAFTL

Query:  EGQ
        E Q
Subjt:  EGQ

TrEMBL top hitse value%identityAlignment
A0A0A0KCW9 SWIM-type domain-containing protein7.2e-4594.17Show/hide
Query:  MASSVQRSPQLDQIHGEIRDSFRAIPYTNTPANKRVELFDERGINESTTDDNVQMTSSITSQELNNVGKKIMDDSDPAIDSSKMVVEQTIEMGRQSAFTL
        MASSVQRSP+LDQIHGEIRDSFR IPYTNTPANKRVELFDERGINES+TDDNVQMT SI SQELNNVGKKIMDDSDPAI+SSKMVVEQTIEMGRQSAFTL
Subjt:  MASSVQRSPQLDQIHGEIRDSFRAIPYTNTPANKRVELFDERGINESTTDDNVQMTSSITSQELNNVGKKIMDDSDPAIDSSKMVVEQTIEMGRQSAFTL

Query:  EGQ
        EGQ
Subjt:  EGQ

A0A1S3C712 uncharacterized protein LOC103497748 isoform X21.5e-47100Show/hide
Query:  MASSVQRSPQLDQIHGEIRDSFRAIPYTNTPANKRVELFDERGINESTTDDNVQMTSSITSQELNNVGKKIMDDSDPAIDSSKMVVEQTIEMGRQSAFTL
        MASSVQRSPQLDQIHGEIRDSFRAIPYTNTPANKRVELFDERGINESTTDDNVQMTSSITSQELNNVGKKIMDDSDPAIDSSKMVVEQTIEMGRQSAFTL
Subjt:  MASSVQRSPQLDQIHGEIRDSFRAIPYTNTPANKRVELFDERGINESTTDDNVQMTSSITSQELNNVGKKIMDDSDPAIDSSKMVVEQTIEMGRQSAFTL

Query:  EG
        EG
Subjt:  EG

A0A1S3C8R6 uncharacterized protein LOC103497748 isoform X14.1e-48100Show/hide
Query:  MASSVQRSPQLDQIHGEIRDSFRAIPYTNTPANKRVELFDERGINESTTDDNVQMTSSITSQELNNVGKKIMDDSDPAIDSSKMVVEQTIEMGRQSAFTL
        MASSVQRSPQLDQIHGEIRDSFRAIPYTNTPANKRVELFDERGINESTTDDNVQMTSSITSQELNNVGKKIMDDSDPAIDSSKMVVEQTIEMGRQSAFTL
Subjt:  MASSVQRSPQLDQIHGEIRDSFRAIPYTNTPANKRVELFDERGINESTTDDNVQMTSSITSQELNNVGKKIMDDSDPAIDSSKMVVEQTIEMGRQSAFTL

Query:  EGQ
        EGQ
Subjt:  EGQ

A0A6J1H5Z5 uncharacterized protein LOC111460335 isoform X14.5e-3980.58Show/hide
Query:  MASSVQRSPQLDQIHGEIRDSFRAIPYTNTPANKRVELFDERGINESTTDDNVQMTSSITSQELNNVGKKIMDDSDPAIDSSKMVVEQTIEMGRQSAFTL
        MASSVQRSP+LDQIHGE+RDSFR + YTN PAN+RVE+FDERGINE TTDDN+QMTSSITSQEL NVGKK MDD+DPAI+SSKMVVEQT+E+GRQS+ T 
Subjt:  MASSVQRSPQLDQIHGEIRDSFRAIPYTNTPANKRVELFDERGINESTTDDNVQMTSSITSQELNNVGKKIMDDSDPAIDSSKMVVEQTIEMGRQSAFTL

Query:  EGQ
        +GQ
Subjt:  EGQ

A0A6J1KW10 uncharacterized protein LOC111499213 isoform X11.3e-3878.64Show/hide
Query:  MASSVQRSPQLDQIHGEIRDSFRAIPYTNTPANKRVELFDERGINESTTDDNVQMTSSITSQELNNVGKKIMDDSDPAIDSSKMVVEQTIEMGRQSAFTL
        MASSVQRSP+LDQIHGE+RDSFR + YTN PAN+RV++FDERGINE TTDDN+QMTSSITSQEL N+GKK MDD+DPAI+SSKMVVEQT+E+GRQS+ T 
Subjt:  MASSVQRSPQLDQIHGEIRDSFRAIPYTNTPANKRVELFDERGINESTTDDNVQMTSSITSQELNNVGKKIMDDSDPAIDSSKMVVEQTIEMGRQSAFTL

Query:  EGQ
        +GQ
Subjt:  EGQ

SwissProt top hitse value%identityAlignment
Q944A9 Novel plant SNARE 114.4e-0740.85Show/hide
Query:  NKRVELFDERGINESTTDDNVQMTSSITSQELNNVGKKIMDDSDPAIDSSKMVVEQTIEMGRQSAFTLEGQ
        NKRV+LFD  G  E   ++NV + S++++QEL + G  +MDD+D AI+  K +V++TI +G  ++  L+ Q
Subjt:  NKRVELFDERGINESTTDDNVQMTSSITSQELNNVGKKIMDDSDPAIDSSKMVVEQTIEMGRQSAFTLEGQ

Q9LNH6 Novel plant SNARE 129.1e-1332.22Show/hide
Query:  MASSVQRSPQLDQIHGEIRDSFRAI---------------------------------------------------------------------------
        MAS +  SP L+QIHGEIRD FRA+                                                                           
Subjt:  MASSVQRSPQLDQIHGEIRDSFRAI---------------------------------------------------------------------------

Query:  PYTNTPANKRVELFDE-RGIN-ESTTDDNVQMTSSITSQELNNVGKKIMDDSDPAIDSSKMVVEQTIEMGRQSAFTLEGQ
         Y NT  NK+VELFD   G++ E T ++NVQM S++++QEL + G K MD++D AI+ SK VV QT+E+G Q+A  L+GQ
Subjt:  PYTNTPANKRVELFDE-RGIN-ESTTDDNVQMTSSITSQELNNVGKKIMDDSDPAIDSSKMVVEQTIEMGRQSAFTLEGQ

Q9LRP1 Novel plant SNARE 133.1e-1332.78Show/hide
Query:  MASSVQRSPQLDQIHGEIRDSFRAI---------------------------------------------------------------------------
        MAS++  SPQL+QIHGEIRD FRA+                                                                           
Subjt:  MASSVQRSPQLDQIHGEIRDSFRAI---------------------------------------------------------------------------

Query:  PYTNTPANKRVELFD-ERGIN-ESTTDDNVQMTSSITSQELNNVGKKIMDDSDPAIDSSKMVVEQTIEMGRQSAFTLEGQ
         Y +T  NK+VELFD   G++ E T ++NVQ+ SS+++QEL + G K MD++D AI+ SK VVEQT+E+G Q+A  L+GQ
Subjt:  PYTNTPANKRVELFD-ERGIN-ESTTDDNVQMTSSITSQELNNVGKKIMDDSDPAIDSSKMVVEQTIEMGRQSAFTLEGQ

Arabidopsis top hitse value%identityAlignment
AT1G48240.1 novel plant snare 126.5e-1432.22Show/hide
Query:  MASSVQRSPQLDQIHGEIRDSFRAI---------------------------------------------------------------------------
        MAS +  SP L+QIHGEIRD FRA+                                                                           
Subjt:  MASSVQRSPQLDQIHGEIRDSFRAI---------------------------------------------------------------------------

Query:  PYTNTPANKRVELFDE-RGIN-ESTTDDNVQMTSSITSQELNNVGKKIMDDSDPAIDSSKMVVEQTIEMGRQSAFTLEGQ
         Y NT  NK+VELFD   G++ E T ++NVQM S++++QEL + G K MD++D AI+ SK VV QT+E+G Q+A  L+GQ
Subjt:  PYTNTPANKRVELFDE-RGIN-ESTTDDNVQMTSSITSQELNNVGKKIMDDSDPAIDSSKMVVEQTIEMGRQSAFTLEGQ

AT2G35190.1 novel plant snare 113.1e-0840.85Show/hide
Query:  NKRVELFDERGINESTTDDNVQMTSSITSQELNNVGKKIMDDSDPAIDSSKMVVEQTIEMGRQSAFTLEGQ
        NKRV+LFD  G  E   ++NV + S++++QEL + G  +MDD+D AI+  K +V++TI +G  ++  L+ Q
Subjt:  NKRVELFDERGINESTTDDNVQMTSSITSQELNNVGKKIMDDSDPAIDSSKMVVEQTIEMGRQSAFTLEGQ

AT3G17440.1 novel plant snare 132.2e-1432.78Show/hide
Query:  MASSVQRSPQLDQIHGEIRDSFRAI---------------------------------------------------------------------------
        MAS++  SPQL+QIHGEIRD FRA+                                                                           
Subjt:  MASSVQRSPQLDQIHGEIRDSFRAI---------------------------------------------------------------------------

Query:  PYTNTPANKRVELFD-ERGIN-ESTTDDNVQMTSSITSQELNNVGKKIMDDSDPAIDSSKMVVEQTIEMGRQSAFTLEGQ
         Y +T  NK+VELFD   G++ E T ++NVQ+ SS+++QEL + G K MD++D AI+ SK VVEQT+E+G Q+A  L+GQ
Subjt:  PYTNTPANKRVELFD-ERGIN-ESTTDDNVQMTSSITSQELNNVGKKIMDDSDPAIDSSKMVVEQTIEMGRQSAFTLEGQ

AT3G17440.2 novel plant snare 132.2e-1432.78Show/hide
Query:  MASSVQRSPQLDQIHGEIRDSFRAI---------------------------------------------------------------------------
        MAS++  SPQL+QIHGEIRD FRA+                                                                           
Subjt:  MASSVQRSPQLDQIHGEIRDSFRAI---------------------------------------------------------------------------

Query:  PYTNTPANKRVELFD-ERGIN-ESTTDDNVQMTSSITSQELNNVGKKIMDDSDPAIDSSKMVVEQTIEMGRQSAFTLEGQ
         Y +T  NK+VELFD   G++ E T ++NVQ+ SS+++QEL + G K MD++D AI+ SK VVEQT+E+G Q+A  L+GQ
Subjt:  PYTNTPANKRVELFD-ERGIN-ESTTDDNVQMTSSITSQELNNVGKKIMDDSDPAIDSSKMVVEQTIEMGRQSAFTLEGQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAGCAGTGTGCAGCGGAGCCCTCAGTTGGATCAGATCCATGGTGAAATTCGCGACAGTTTTCGTGCCATTCCGTATACAAATACTCCTGCTAATAAGAGG
GTAGAGCTGTTTGATGAGCGAGGCATTAATGAATCTACAACTGATGATAATGTTCAGATGACATCATCAATAACAAGTCAAGAACTGAACAATGTTGGGAAGAAG
ATAATGGATGATAGTGATCCTGCGATTGACAGCTCTAAAATGGTAGTTGAACAAACCATTGAAATGGGAAGGCAGTCTGCTTTTACATTGGAAGGTCAAGTATGT
ATATAA
mRNA sequenceShow/hide mRNA sequence
CGTTTCCTCCAAAATTCAGCTCCTCTTTTCTCCTTTTAACTCCCTACGTTTCAGCCTTTCATCATCGTCTTCTTCGCAAGCCTTTCTTTCATTCATTCCTCTTTT
CCGTTTTCTCTTCACTCCTCTCTCTCCTTTAACCCCCTTTCAGTTTGCTTTCATGGAACCCGATACTTGAGAACCAACCGTTCGTTTATATTAAATGCAATAACT
AAATTTCCCTCCGCTTCTTCGCCTTGTTCTCTCGGTGGAATGGCTAGCAGTGTGCAGCGGAGCCCTCAGTTGGATCAGATCCATGGTGAAATTCGCGACAGTTTT
CGTGCCATTCCGTATACAAATACTCCTGCTAATAAGAGGGTAGAGCTGTTTGATGAGCGAGGCATTAATGAATCTACAACTGATGATAATGTTCAGATGACATCA
TCAATAACAAGTCAAGAACTGAACAATGTTGGGAAGAAGATAATGGATGATAGTGATCCTGCGATTGACAGCTCTAAAATGGTAGTTGAACAAACCATTGAAATG
GGAAGGCAGTCTGCTTTTACATTGGAAGGTCAAGTATGTATATAA
Protein sequenceShow/hide protein sequence
MASSVQRSPQLDQIHGEIRDSFRAIPYTNTPANKRVELFDERGINESTTDDNVQMTSSITSQELNNVGKKIMDDSDPAIDSSKMVVEQTIEMGRQSAFTLEGQVC
I