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MELO3C021428 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C021428
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
Descriptionprotein BIC2
Genome locationchr11:27245814..27246309
RNA-Seq ExpressionMELO3C021428
SyntenyMELO3C021428
Gene Ontology termsGO:0009785 - blue light signaling pathway (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0033897 - ribonuclease T2 activity (molecular function)
InterPro domainsIPR040374 - Protein BIC


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570486.1 Protein HIRA, partial [Cucurbita argyrosperma subsp. sororia]1.6e-3174.77Show/hide
Query:  MIPPNSSHPHDSLSVVASATAPAPSPAGASTGDSSSTVGPEKLKGCCGVRERLKRHREEVAGKVTVPDKWGKEELLKDWIDYSAFDRILAAGRIASARAS
        M+PPN S   D LS   ++T PA +P   S GDSS   G EKLKGCCG RERLKRHREEVAGKVTVP+KWGKEELLKDWIDYSAFDRILAAGRIASARAS
Subjt:  MIPPNSSHPHDSLSVVASATAPAPSPAGASTGDSSSTVGPEKLKGCCGVRERLKRHREEVAGKVTVPDKWGKEELLKDWIDYSAFDRILAAGRIASARAS

Query:  LAAEGQQ
        L AEG++
Subjt:  LAAEGQQ

KAG7010351.1 60S ribosomal protein L10a, partial [Cucurbita argyrosperma subsp. argyrosperma]9.4e-3272.65Show/hide
Query:  MIPPNSSHPHDSLSVVASATAPAPSPAGASTGDSSSTVGPEKLKGCCGVRERLKRHREEVAGKVTVPDKWGKEELLKDWIDYSAFDRILAAGRIASARAS
        M+PPN S   D LS   ++T PA +P   S GDSS   G EK KGCCG RERLKRHREEVAGKVTVP+KWGKEELLKDWIDYSAFDRILAAGRIASARAS
Subjt:  MIPPNSSHPHDSLSVVASATAPAPSPAGASTGDSSSTVGPEKLKGCCGVRERLKRHREEVAGKVTVPDKWGKEELLKDWIDYSAFDRILAAGRIASARAS

Query:  LAAEGQQNRSRRRVESR
        L AEG      RRVESR
Subjt:  LAAEGQQNRSRRRVESR

KGN46948.1 hypothetical protein Csa_020684 [Cucumis sativus]1.8e-4385.83Show/hide
Query:  MIPPNSSHPHDSLSVVASATAPAPSPAGASTGDSSSTVGPEKLKGCCGVRERLKRHREEVAGKVTVPDKWGKEELLKDWIDYSAFDRILAAGRIASARAS
        M+PPNSS   DS SV ASATAPAPSPAG STGDSS  VG EKLKGC GVRERLKRHREEVAGKV VP+KWGKEELLKDWIDYSAFDRILAAGRIASARAS
Subjt:  MIPPNSSHPHDSLSVVASATAPAPSPAGASTGDSSSTVGPEKLKGCCGVRERLKRHREEVAGKVTVPDKWGKEELLKDWIDYSAFDRILAAGRIASARAS

Query:  LAAEGQQN--RSRRRVESRC
        LAAEGQ+N  RS RRVESRC
Subjt:  LAAEGQQN--RSRRRVESRC

TYK18920.1 uncharacterized protein E5676_scaffold28061G00010 [Cucumis melo var. makuwa]9.3e-5699.15Show/hide
Query:  MIPPNSSHPHDSLSVVASATAPAPSPAGASTGDSSSTVGPEKLKGCCGVRERLKRHREEVAGKVTVPDKWGKEELLKDWIDYSAFDRILAAGRIASARAS
        MIPPNSSHPHDSLSVVASATAPAPSPAGASTGDSSSTVGPEKLKGCCGVRERLKRHREEVAGKVTVP+KWGKEELLKDWIDYSAFDRILAAGRIASARAS
Subjt:  MIPPNSSHPHDSLSVVASATAPAPSPAGASTGDSSSTVGPEKLKGCCGVRERLKRHREEVAGKVTVPDKWGKEELLKDWIDYSAFDRILAAGRIASARAS

Query:  LAAEGQQNRSRRRVESRC
        LAAEGQQNRSRRRVESRC
Subjt:  LAAEGQQNRSRRRVESRC

XP_008458586.1 PREDICTED: uncharacterized protein LOC103497945 [Cucumis melo]3.2e-56100Show/hide
Query:  MIPPNSSHPHDSLSVVASATAPAPSPAGASTGDSSSTVGPEKLKGCCGVRERLKRHREEVAGKVTVPDKWGKEELLKDWIDYSAFDRILAAGRIASARAS
        MIPPNSSHPHDSLSVVASATAPAPSPAGASTGDSSSTVGPEKLKGCCGVRERLKRHREEVAGKVTVPDKWGKEELLKDWIDYSAFDRILAAGRIASARAS
Subjt:  MIPPNSSHPHDSLSVVASATAPAPSPAGASTGDSSSTVGPEKLKGCCGVRERLKRHREEVAGKVTVPDKWGKEELLKDWIDYSAFDRILAAGRIASARAS

Query:  LAAEGQQNRSRRRVESRC
        LAAEGQQNRSRRRVESRC
Subjt:  LAAEGQQNRSRRRVESRC

TrEMBL top hitse value%identityAlignment
A0A0A0KBS7 Uncharacterized protein8.8e-4485.83Show/hide
Query:  MIPPNSSHPHDSLSVVASATAPAPSPAGASTGDSSSTVGPEKLKGCCGVRERLKRHREEVAGKVTVPDKWGKEELLKDWIDYSAFDRILAAGRIASARAS
        M+PPNSS   DS SV ASATAPAPSPAG STGDSS  VG EKLKGC GVRERLKRHREEVAGKV VP+KWGKEELLKDWIDYSAFDRILAAGRIASARAS
Subjt:  MIPPNSSHPHDSLSVVASATAPAPSPAGASTGDSSSTVGPEKLKGCCGVRERLKRHREEVAGKVTVPDKWGKEELLKDWIDYSAFDRILAAGRIASARAS

Query:  LAAEGQQN--RSRRRVESRC
        LAAEGQ+N  RS RRVESRC
Subjt:  LAAEGQQN--RSRRRVESRC

A0A1S3C9F3 uncharacterized protein LOC1034979451.6e-56100Show/hide
Query:  MIPPNSSHPHDSLSVVASATAPAPSPAGASTGDSSSTVGPEKLKGCCGVRERLKRHREEVAGKVTVPDKWGKEELLKDWIDYSAFDRILAAGRIASARAS
        MIPPNSSHPHDSLSVVASATAPAPSPAGASTGDSSSTVGPEKLKGCCGVRERLKRHREEVAGKVTVPDKWGKEELLKDWIDYSAFDRILAAGRIASARAS
Subjt:  MIPPNSSHPHDSLSVVASATAPAPSPAGASTGDSSSTVGPEKLKGCCGVRERLKRHREEVAGKVTVPDKWGKEELLKDWIDYSAFDRILAAGRIASARAS

Query:  LAAEGQQNRSRRRVESRC
        LAAEGQQNRSRRRVESRC
Subjt:  LAAEGQQNRSRRRVESRC

A0A5A7STT7 Uncharacterized protein1.6e-56100Show/hide
Query:  MIPPNSSHPHDSLSVVASATAPAPSPAGASTGDSSSTVGPEKLKGCCGVRERLKRHREEVAGKVTVPDKWGKEELLKDWIDYSAFDRILAAGRIASARAS
        MIPPNSSHPHDSLSVVASATAPAPSPAGASTGDSSSTVGPEKLKGCCGVRERLKRHREEVAGKVTVPDKWGKEELLKDWIDYSAFDRILAAGRIASARAS
Subjt:  MIPPNSSHPHDSLSVVASATAPAPSPAGASTGDSSSTVGPEKLKGCCGVRERLKRHREEVAGKVTVPDKWGKEELLKDWIDYSAFDRILAAGRIASARAS

Query:  LAAEGQQNRSRRRVESRC
        LAAEGQQNRSRRRVESRC
Subjt:  LAAEGQQNRSRRRVESRC

A0A5D3D5X1 Uncharacterized protein4.5e-5699.15Show/hide
Query:  MIPPNSSHPHDSLSVVASATAPAPSPAGASTGDSSSTVGPEKLKGCCGVRERLKRHREEVAGKVTVPDKWGKEELLKDWIDYSAFDRILAAGRIASARAS
        MIPPNSSHPHDSLSVVASATAPAPSPAGASTGDSSSTVGPEKLKGCCGVRERLKRHREEVAGKVTVP+KWGKEELLKDWIDYSAFDRILAAGRIASARAS
Subjt:  MIPPNSSHPHDSLSVVASATAPAPSPAGASTGDSSSTVGPEKLKGCCGVRERLKRHREEVAGKVTVPDKWGKEELLKDWIDYSAFDRILAAGRIASARAS

Query:  LAAEGQQNRSRRRVESRC
        LAAEGQQNRSRRRVESRC
Subjt:  LAAEGQQNRSRRRVESRC

A0A6J1DHR5 protein BIC28.3e-2671.29Show/hide
Query:  SPAGASTGDSSSTVGPEKL----KGCCGVRERLKRHREEVAGKVTVPDKWGKEELLKDWIDYSAFDRILAAGRIASARASLAAEGQQ---NRSRRRVESR
        +PA A+  +S    G EKL    K  CGVRERLKRHREEVAGKVTVP+KWGKEELLKDWIDYSAFDRILAA RIA+ARASLAAEG++   +R   RVESR
Subjt:  SPAGASTGDSSSTVGPEKL----KGCCGVRERLKRHREEVAGKVTVPDKWGKEELLKDWIDYSAFDRILAAGRIASARASLAAEGQQ---NRSRRRVESR

Query:  C
        C
Subjt:  C

SwissProt top hitse value%identityAlignment
Q9LXJ1 Protein BIC12.9e-1255.74Show/hide
Query:  RERLKRHREEVAGKVTVPDKWGKEELLKDWIDYSAFDRILAAGRIASARASLAAEGQQNRS
        RERLK+HR E+AG+V +P+ WG+EELLKDWID S FD  L    I+SAR +L  E ++  S
Subjt:  RERLKRHREEVAGKVTVPDKWGKEELLKDWIDYSAFDRILAAGRIASARASLAAEGQQNRS

Q9M280 Protein BIC22.0e-1352.63Show/hide
Query:  RERLKRHREEVAGKVTVPDKWGKEELLKDWIDYSAFDRILAAGRIASARASLAAEGQQNRSRR-------RVESRC
        R+RLKRHREEVAGKV +PD WGKE LL  W+D+S FD    + +I SARA+L A+   +   R       RVES C
Subjt:  RERLKRHREEVAGKVTVPDKWGKEELLKDWIDYSAFDRILAAGRIASARASLAAEGQQNRSRR-------RVESRC

Arabidopsis top hitse value%identityAlignment
AT3G44450.1 unknown protein1.5e-1452.63Show/hide
Query:  RERLKRHREEVAGKVTVPDKWGKEELLKDWIDYSAFDRILAAGRIASARASLAAEGQQNRSRR-------RVESRC
        R+RLKRHREEVAGKV +PD WGKE LL  W+D+S FD    + +I SARA+L A+   +   R       RVES C
Subjt:  RERLKRHREEVAGKVTVPDKWGKEELLKDWIDYSAFDRILAAGRIASARASLAAEGQQNRSRR-------RVESRC

AT3G52740.1 unknown protein2.1e-1355.74Show/hide
Query:  RERLKRHREEVAGKVTVPDKWGKEELLKDWIDYSAFDRILAAGRIASARASLAAEGQQNRS
        RERLK+HR E+AG+V +P+ WG+EELLKDWID S FD  L    I+SAR +L  E ++  S
Subjt:  RERLKRHREEVAGKVTVPDKWGKEELLKDWIDYSAFDRILAAGRIASARASLAAEGQQNRS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCCCCCAAACTCCTCCCATCCCCATGACTCTCTTTCCGTCGTAGCAAGCGCTACGGCTCCTGCACCATCCCCCGCCGGTGCCTCCACCGGAGATTCTAGC
AGCACTGTTGGGCCTGAGAAATTGAAGGGCTGTTGTGGTGTTCGAGAGCGGCTGAAAAGGCACCGTGAAGAGGTCGCCGGGAAAGTGACGGTGCCCGATAAATGG
GGCAAAGAGGAGCTGCTCAAGGATTGGATCGACTACTCGGCGTTCGACAGAATCTTGGCCGCCGGCAGAATAGCGTCGGCGAGGGCGTCTCTAGCGGCGGAGGGA
CAGCAGAACCGTTCACGGCGGAGGGTAGAAAGCAGGTGTTGA
mRNA sequenceShow/hide mRNA sequence
CCACACAACCCTTCTATTTAACTATTATTATCTCTCCCTCTCAGAACTCAATTCCACAATTCGCTATGATTCCCCCAAACTCCTCCCATCCCCATGACTCTCTTT
CCGTCGTAGCAAGCGCTACGGCTCCTGCACCATCCCCCGCCGGTGCCTCCACCGGAGATTCTAGCAGCACTGTTGGGCCTGAGAAATTGAAGGGCTGTTGTGGTG
TTCGAGAGCGGCTGAAAAGGCACCGTGAAGAGGTCGCCGGGAAAGTGACGGTGCCCGATAAATGGGGCAAAGAGGAGCTGCTCAAGGATTGGATCGACTACTCGG
CGTTCGACAGAATCTTGGCCGCCGGCAGAATAGCGTCGGCGAGGGCGTCTCTAGCGGCGGAGGGACAGCAGAACCGTTCACGGCGGAGGGTAGAAAGCAGGTGTT
GAGATTGGGGAAAATCTGTTTTTAATTAACAACTTTGAATTCATATTTTATTGTTATCTATAGAGAGATTAAAACA
Protein sequenceShow/hide protein sequence
MIPPNSSHPHDSLSVVASATAPAPSPAGASTGDSSSTVGPEKLKGCCGVRERLKRHREEVAGKVTVPDKWGKEELLKDWIDYSAFDRILAAGRIASARASLAAEG
QQNRSRRRVESRC