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MELO3C021682 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C021682
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionTNFR/CD27/30/40/95 cysteine-rich region
Genome locationchr12:15282410..15282748
RNA-Seq ExpressionMELO3C021682
SyntenyMELO3C021682
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573550.1 hypothetical protein SDJN03_27437, partial [Cucurbita argyrosperma subsp. sororia]2.2e-3075.82Show/hide
Query:  IAAAVILMTAIWLAVACPADGKVCSDCIRNRMERDCPACAPPLRCMAQCLWGGGSRSRCVNRCDSGGAWASLASCKQCISKCKCKCSSSSS
        I AAVILMTAI L   CPAD K+C DCIR+RM   CPACAPPLRCMAQCLWGGGSRSRCV +CDSGGAWA L SCK+C+  CKC C+SSSS
Subjt:  IAAAVILMTAIWLAVACPADGKVCSDCIRNRMERDCPACAPPLRCMAQCLWGGGSRSRCVNRCDSGGAWASLASCKQCISKCKCKCSSSSS

KAG6573554.1 hypothetical protein SDJN03_27441, partial [Cucurbita argyrosperma subsp. sororia]7.8e-2871.43Show/hide
Query:  IAAAVILMTAIWLAVACPADGKVCSDCIRNRMERDCPACAPPLRCMAQCLWGGGSRSRCVNRCDSGGAWASLASCKQCISKCKCKCSSSSS
        I A VILMT I L   C AD K+C DCIR+RM   CPACAPPLRCMAQCLWGGGSRSRCV +CD GGAWA L SCK+C+  CKC C+SSSS
Subjt:  IAAAVILMTAIWLAVACPADGKVCSDCIRNRMERDCPACAPPLRCMAQCLWGGGSRSRCVNRCDSGGAWASLASCKQCISKCKCKCSSSSS

KAG7012656.1 hypothetical protein SDJN02_25409, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-2970.1Show/hide
Query:  ANRSLLIAAAVILMTAIWLAVACPADGKVCSDCIRNRMERDCPACAPPLRCMAQCLWGGGSRSRCVNRCDSGGAWASLASCKQCISKCKCKCSSSSS
        A+    I AAVILMTAI L   CP D K+C DCIR+RM   CPACAPPLRCMAQCLWGGGSRSRCV +CD GGAWA L SCK+C+  CKC C+SSSS
Subjt:  ANRSLLIAAAVILMTAIWLAVACPADGKVCSDCIRNRMERDCPACAPPLRCMAQCLWGGGSRSRCVNRCDSGGAWASLASCKQCISKCKCKCSSSSS

XP_010646205.1 PREDICTED: uncharacterized protein LOC104878123 [Vitis vinifera]1.7e-1952.17Show/hide
Query:  IAAAVILMTAIWL----AVACPADGKVCSDCIRNRMERDCPACAPPLRCMAQCLWGGGSRSRCVNRCDSGGAWASLASCKQCISKCKCKCSS
        +AA ++L+   WL    A+ CP+DG  C DCI N+M   CP+CAP LRCMA+CLWGG S+S+CV RCD  G    L+ CK+C+S+CKC C +
Subjt:  IAAAVILMTAIWL----AVACPADGKVCSDCIRNRMERDCPACAPPLRCMAQCLWGGGSRSRCVNRCDSGGAWASLASCKQCISKCKCKCSS

XP_030471211.1 uncharacterized protein LOC115689343 [Syzygium oleosum]4.6e-2052.17Show/hide
Query:  IAAAVILMTAIWL------AVACPADGKVCSDCIRNRMERDCPACAPPLRCMAQCLWGGGSRSRCVNRCDSGGAWASLASCKQCISKCKCKC
        +A   ++M  +WL      AVACP+DG  C DCI NR+   CP+C P LRCM QCLWGG SR++C  RCD  G    L+ CK+C+SKCKC C
Subjt:  IAAAVILMTAIWL------AVACPADGKVCSDCIRNRMERDCPACAPPLRCMAQCLWGGGSRSRCVNRCDSGGAWASLASCKQCISKCKCKC

TrEMBL top hitse value%identityAlignment
A0A0A0LW71 Uncharacterized protein5.6e-4082.52Show/hide
Query:  MANRSLLIAAAVILMTAIWLAVACPADGKVCSDCIRNRMERDCPACAPPLRCMAQCLWGGGSRSRCVNRCDSGGAWASLASCKQCISKCKCKCSSSSSSS
        MA RSL I   VILMTA+WL V CPA+GKVC+DCIRNRME+DCPACAPPLRCMAQCLWGG SRSRCVNRCDSGGAWASLASCKQCI+KCKC+CSSSS  S
Subjt:  MANRSLLIAAAVILMTAIWLAVACPADGKVCSDCIRNRMERDCPACAPPLRCMAQCLWGGGSRSRCVNRCDSGGAWASLASCKQCISKCKCKCSSSSSSS

Query:  SSS
          S
Subjt:  SSS

A0A166H086 Uncharacterized protein1.2e-1858.67Show/hide
Query:  AVACPADGKVCSDCIRNRMERDCPACAPPLRCMAQCLWGGG-SRSRCVNRCDSGGAWASLASCKQCISKCKCKCS
        A+ACPADG  C DCI NRM+ DCPACAP +RCMAQCLW  G S+ +CV +CD  G +  ++ CK+C+ +CKC CS
Subjt:  AVACPADGKVCSDCIRNRMERDCPACAPPLRCMAQCLWGGG-SRSRCVNRCDSGGAWASLASCKQCISKCKCKCS

A0A438FE46 Uncharacterized protein8.4e-2052.17Show/hide
Query:  IAAAVILMTAIWL----AVACPADGKVCSDCIRNRMERDCPACAPPLRCMAQCLWGGGSRSRCVNRCDSGGAWASLASCKQCISKCKCKCSS
        +AA ++L+   WL    A+ CP+DG  C DCI N+M   CP+CAP LRCMA+CLWGG S+S+CV RCD  G    L+ CK+C+S+CKC C +
Subjt:  IAAAVILMTAIWL----AVACPADGKVCSDCIRNRMERDCPACAPPLRCMAQCLWGGGSRSRCVNRCDSGGAWASLASCKQCISKCKCKCSS

A0A438JGC2 Uncharacterized protein4.2e-1950Show/hide
Query:  NRSLLIAAAVILMTAI-WL----AVACPADGKVCSDCIRNRMERDCPACAPPLRCMAQCLWGGGSRSRCVNRCDSGGAWASLASCKQCISKCKCKCSS
        N+ L   AAV+++  + WL    A++CP+DG  C DCI N+M   CP+CAP L CMA+CLWGG S+S+CV RCD  G    L+ CK+C+S+CKC C +
Subjt:  NRSLLIAAAVILMTAI-WL----AVACPADGKVCSDCIRNRMERDCPACAPPLRCMAQCLWGGGSRSRCVNRCDSGGAWASLASCKQCISKCKCKCSS

A5AHI4 Uncharacterized protein3.2e-1951.09Show/hide
Query:  IAAAVILMTAIWL----AVACPADGKVCSDCIRNRMERDCPACAPPLRCMAQCLWGGGSRSRCVNRCDSGGAWASLASCKQCISKCKCKCSS
        +AA ++L+   WL    A+ CP+DG  C DCI N+M   CP+CAP L CMA+CLWGG S+S+CV RCD  G    L+ CK+C+S+CKC C +
Subjt:  IAAAVILMTAIWL----AVACPADGKVCSDCIRNRMERDCPACAPPLRCMAQCLWGGGSRSRCVNRCDSGGAWASLASCKQCISKCKCKCSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G12064.1 unknown protein5.8e-1340.43Show/hide
Query:  LLIAAAVILMTAIWLAVAC--PADGKVCSDCIRNRMERDCPACAPPLRCMAQCLWGGGSRSRCVN--RCDSGGAWASLASCKQCISKCKCKCSS
        L+I   +    A+     C  P     C  C+  +M+ DCP C P LRCMA+CLWGG ++ +C    RCD+  A  SL  CK+C+S+CKC C++
Subjt:  LLIAAAVILMTAIWLAVAC--PADGKVCSDCIRNRMERDCPACAPPLRCMAQCLWGGGSRSRCVN--RCDSGGAWASLASCKQCISKCKCKCSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAACAGATCATTACTAATCGCGGCGGCGGTGATTCTGATGACCGCTATCTGGCTGGCGGTGGCTTGCCCAGCGGACGGCAAGGTGTGCTCCGACTGCATCAGGAA
CAGGATGGAGCGAGACTGCCCGGCGTGTGCTCCGCCCCTGCGTTGCATGGCACAGTGCCTTTGGGGCGGTGGTTCGAGGTCGAGGTGCGTTAATCGGTGTGATTCCGGCG
GCGCGTGGGCGAGCTTGGCAAGCTGCAAGCAGTGCATTTCCAAATGCAAGTGCAAGTGCAGTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTTGAGTGTGGAATTA
ATTAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAACAGATCATTACTAATCGCGGCGGCGGTGATTCTGATGACCGCTATCTGGCTGGCGGTGGCTTGCCCAGCGGACGGCAAGGTGTGCTCCGACTGCATCAGGAA
CAGGATGGAGCGAGACTGCCCGGCGTGTGCTCCGCCCCTGCGTTGCATGGCACAGTGCCTTTGGGGCGGTGGTTCGAGGTCGAGGTGCGTTAATCGGTGTGATTCCGGCG
GCGCGTGGGCGAGCTTGGCAAGCTGCAAGCAGTGCATTTCCAAATGCAAGTGCAAGTGCAGTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTTGAGTGTGGAATTA
ATTAATTAA
Protein sequenceShow/hide protein sequence
MANRSLLIAAAVILMTAIWLAVACPADGKVCSDCIRNRMERDCPACAPPLRCMAQCLWGGGSRSRCVNRCDSGGAWASLASCKQCISKCKCKCSSSSSSSSSSSSLSVEL
IN