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MELO3C021868 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C021868
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr05:10531365..10532042
RNA-Seq ExpressionMELO3C021868
SyntenyMELO3C021868
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037866.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.0e-2890.54Show/hide
Query:  MENIHYMYDVSIVLAPVQRRRPLVQESDQLEEVDQHVEEVPPVTQTQTQREHSYVSPVMMMPTFGTTYYDSGVG
        +ENIHYMYDVSIV APVQR+RPLVQE DQLEEVDQHVEEVPPVTQTQTQ EHSYVSP+MMMPTFGTTYYD GVG
Subjt:  MENIHYMYDVSIVLAPVQRRRPLVQESDQLEEVDQHVEEVPPVTQTQTQREHSYVSPVMMMPTFGTTYYDSGVG

KAA0051233.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.9e-2890.54Show/hide
Query:  MENIHYMYDVSIVLAPVQRRRPLVQESDQLEEVDQHVEEVPPVTQTQTQREHSYVSPVMMMPTFGTTYYDSGVG
        MENIHYMYDV IV APVQRRRPLVQE DQLEEVDQH EEVPP+TQTQTQ EH+YVSPVMMMPTFGTTYYDSGVG
Subjt:  MENIHYMYDVSIVLAPVQRRRPLVQESDQLEEVDQHVEEVPPVTQTQTQREHSYVSPVMMMPTFGTTYYDSGVG

TYK09816.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.0e-2890.54Show/hide
Query:  MENIHYMYDVSIVLAPVQRRRPLVQESDQLEEVDQHVEEVPPVTQTQTQREHSYVSPVMMMPTFGTTYYDSGVG
        +ENIHYMYDVSIV APVQR+RPLVQE DQLEEVDQHVEEVPPVTQTQTQ EHSYVSP+MMMPTFGTTYYD GVG
Subjt:  MENIHYMYDVSIVLAPVQRRRPLVQESDQLEEVDQHVEEVPPVTQTQTQREHSYVSPVMMMPTFGTTYYDSGVG

TYK18891.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.9e-2890.54Show/hide
Query:  MENIHYMYDVSIVLAPVQRRRPLVQESDQLEEVDQHVEEVPPVTQTQTQREHSYVSPVMMMPTFGTTYYDSGVG
        MENIHYMYDV IV APVQRRRPLVQE DQLEEVDQH EEVPP+TQTQTQ EH+YVSPVMMMPTFGTTYYDSGVG
Subjt:  MENIHYMYDVSIVLAPVQRRRPLVQESDQLEEVDQHVEEVPPVTQTQTQREHSYVSPVMMMPTFGTTYYDSGVG

XP_016900498.1 PREDICTED: GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo]5.2e-2890.54Show/hide
Query:  MENIHYMYDVSIVLAPVQRRRPLVQESDQLEEVDQHVEEVPPVTQTQTQREHSYVSPVMMMPTFGTTYYDSGVG
        MENIHYMYDV IV APVQRRRPLVQESDQLEEVDQH EEVPP+TQTQTQ EH+YVSPVMMMPTFG TYYDSGVG
Subjt:  MENIHYMYDVSIVLAPVQRRRPLVQESDQLEEVDQHVEEVPPVTQTQTQREHSYVSPVMMMPTFGTTYYDSGVG

TrEMBL top hitse value%identityAlignment
A0A5A7T6Q6 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.5e-2890.54Show/hide
Query:  MENIHYMYDVSIVLAPVQRRRPLVQESDQLEEVDQHVEEVPPVTQTQTQREHSYVSPVMMMPTFGTTYYDSGVG
        +ENIHYMYDVSIV APVQR+RPLVQE DQLEEVDQHVEEVPPVTQTQTQ EHSYVSP+MMMPTFGTTYYD GVG
Subjt:  MENIHYMYDVSIVLAPVQRRRPLVQESDQLEEVDQHVEEVPPVTQTQTQREHSYVSPVMMMPTFGTTYYDSGVG

A0A5A7U5S8 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.9e-2890.54Show/hide
Query:  MENIHYMYDVSIVLAPVQRRRPLVQESDQLEEVDQHVEEVPPVTQTQTQREHSYVSPVMMMPTFGTTYYDSGVG
        MENIHYMYDV IV APVQRRRPLVQE DQLEEVDQH EEVPP+TQTQTQ EH+YVSPVMMMPTFGTTYYDSGVG
Subjt:  MENIHYMYDVSIVLAPVQRRRPLVQESDQLEEVDQHVEEVPPVTQTQTQREHSYVSPVMMMPTFGTTYYDSGVG

A0A5D3CHF6 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.5e-2890.54Show/hide
Query:  MENIHYMYDVSIVLAPVQRRRPLVQESDQLEEVDQHVEEVPPVTQTQTQREHSYVSPVMMMPTFGTTYYDSGVG
        +ENIHYMYDVSIV APVQR+RPLVQE DQLEEVDQHVEEVPPVTQTQTQ EHSYVSP+MMMPTFGTTYYD GVG
Subjt:  MENIHYMYDVSIVLAPVQRRRPLVQESDQLEEVDQHVEEVPPVTQTQTQREHSYVSPVMMMPTFGTTYYDSGVG

A0A5D3D5R5 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.9e-2890.54Show/hide
Query:  MENIHYMYDVSIVLAPVQRRRPLVQESDQLEEVDQHVEEVPPVTQTQTQREHSYVSPVMMMPTFGTTYYDSGVG
        MENIHYMYDV IV APVQRRRPLVQE DQLEEVDQH EEVPP+TQTQTQ EH+YVSPVMMMPTFGTTYYDSGVG
Subjt:  MENIHYMYDVSIVLAPVQRRRPLVQESDQLEEVDQHVEEVPPVTQTQTQREHSYVSPVMMMPTFGTTYYDSGVG

A0A5D3DUI1 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.5e-2890.54Show/hide
Query:  MENIHYMYDVSIVLAPVQRRRPLVQESDQLEEVDQHVEEVPPVTQTQTQREHSYVSPVMMMPTFGTTYYDSGVG
        MENIHYMYDV IV APVQRRRPLVQESDQLEEVDQH EEVPP+TQTQTQ EH+YVSPVMMMPTFG TYYDSGVG
Subjt:  MENIHYMYDVSIVLAPVQRRRPLVQESDQLEEVDQHVEEVPPVTQTQTQREHSYVSPVMMMPTFGTTYYDSGVG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAACATCCACTATATGTACGATGTCTCTATTGTACTTGCTCCAGTTCAGAGGAGACGTCCTCTAGTGCAAGAGTCCGATCAATTGGAAGAAGTTGATCAACATGT
GGAAGAAGTGCCTCCCGTGACACAAACACAGACACAAAGGGAGCATAGTTACGTTAGTCCAGTAATGATGATGCCAACATTTGGAACGACATATTATGATTCAGGAGTCG
GTTAA
mRNA sequenceShow/hide mRNA sequence
TAACGAGCAGTACATGGAGAACATCCACTATATGTACGATGTCTCTATTGTACTTGCTCCAGTTCAGAGGAGACGTCCTCTAGTGCAAGAGTCCGATCAATTGGAAGAAG
TTGATCAACATGTGGAAGAAGTGCCTCCCGTGACACAAACACAGACACAAAGGGAGCATAGTTACGTTAGTCCAGTAATGATGATGCCAACATTTGGAACGACATATTAT
GATTCAGGAGTCGGTTAATCGTCAGATTTTGGAAGAGGATATTACAATTCAGAGGCAGGTCCATCATCAACGGACTTTGGGCAACAATACTATGATTTAGGGAGCGATCC
ATCGTCTTCATACATGCATGGTCACAGGCGTGGTCGTGGAGAACATAATGAATATTTGTACTACGAAGTGCCTGCAACAGTACTCGAGCAATCAGATGAGCAACAACAAC
AAGAGAATCAGGAGGAAATACAACAACAAAGAGTTTAGAGTAGTCGATGACAACCAGCTAGAAATCGTCAACGTCCAGGTTATGGAACACATTGATTCTTTTTTTTTTTT
TTTTGAATGAAAATTGTTAAATTATTGTATTAAACATTTTGATTCATATTTAATTATTTTACAATCAAAAGCACTTACTACAA
Protein sequenceShow/hide protein sequence
MENIHYMYDVSIVLAPVQRRRPLVQESDQLEEVDQHVEEVPPVTQTQTQREHSYVSPVMMMPTFGTTYYDSGVG