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MELO3C021924 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C021924
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr02:5968594..5969397
RNA-Seq ExpressionMELO3C021924
SyntenyMELO3C021924
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036767.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]7.7e-8872.44Show/hide
Query:  MMRWLNRRRFTAIRPPVEQFDMDVTQEYINWYKNITRLYIIQPGAIVSYLRSNNNRLKNVADDPQQVLNICNDNEQYIENIHYMYDVPIVHAPIQRRRSL
        +MRW NRRRFTA  PP+EQFDMDVTQEYI+WYKNI++LYI QPGA +S+LRSNN RL+NVADDPQQVLNICNDNEQY+ENIHYMYDVPIV AP+QRRR L
Subjt:  MMRWLNRRRFTAIRPPVEQFDMDVTQEYINWYKNITRLYIIQPGAIVSYLRSNNNRLKNVADDPQQVLNICNDNEQYIENIHYMYDVPIVHAPIQRRRSL

Query:  VQESDQLE-------EVPPVTQTQSEHGYVSPVMMI-----------VGQSSDFGTGYYNSKAGSSSSNFRQQYCDLGSDSSSSYMHCHGRGRGEHNEYL
        VQE DQLE       EVPP+TQTQSEH YVSPVMM+           VGQSSDFG GYYNSKAG SS++F QQY DLGSD SSSYMH HGRGRG+HNEYL
Subjt:  VQESDQLE-------EVPPVTQTQSEHGYVSPVMMI-----------VGQSSDFGTGYYNSKAGSSSSNFRQQYCDLGSDSSSSYMHCHGRGRGEHNEYL

Query:  YYEVPAAILE---------------QSDEQQQQENQEEIQQQRVQS--RQPTRN
        YYEVPAA+ E               QSDEQQQQEN EEIQQQRVQS  RQP RN
Subjt:  YYEVPAAILE---------------QSDEQQQQENQEEIQQQRVQS--RQPTRN

KAA0051227.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]6.5e-9581.43Show/hide
Query:  MMRWLNRRRFTAIRPPVEQFDMDVTQEYINWYKNITRLYIIQPGAIVSYLRSNNNRLKNVADDPQQVLNICNDNEQYIENIHYMYDVPIVHAPIQRRRSL
        MMRWLNRRRFTAIRPPVEQFDMDVTQEYINWYKNITRLYIIQPGA+                    VLNICNDNEQYIENIHYMYDVPIVHAPIQRRRSL
Subjt:  MMRWLNRRRFTAIRPPVEQFDMDVTQEYINWYKNITRLYIIQPGAIVSYLRSNNNRLKNVADDPQQVLNICNDNEQYIENIHYMYDVPIVHAPIQRRRSL

Query:  VQESDQL-------EEVPPVTQTQSEHGYVSPVMMI-----------VGQSSDFGTGYYNSKAGSSSSNFRQQYCDLGSDSSSSYMHCHGRGRGEHNEYL
        VQESDQL       EEVPPVTQTQS+HGYVSPVMM+           VGQSSDFGTGYYNS+AG SSSNFRQQYCDLGSDSSSSYMHCHGRGRGEHNEYL
Subjt:  VQESDQL-------EEVPPVTQTQSEHGYVSPVMMI-----------VGQSSDFGTGYYNSKAGSSSSNFRQQYCDLGSDSSSSYMHCHGRGRGEHNEYL

Query:  YYEVPAAILEQSDEQQQQENQEEIQQQRVQSRQPTRN
        YYEVPAAILEQ DEQQQQENQEEIQQQRVQSRQPTRN
Subjt:  YYEVPAAILEQSDEQQQQENQEEIQQQRVQSRQPTRN

KAA0067080.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.8e-8973.23Show/hide
Query:  MMRWLNRRRFTAIRPPVEQFDMDVTQEYINWYKNITRLYIIQPGAIVSYLRSNNNRLKNVADDPQQVLNICNDNEQYIENIHYMYDVPIVHAPIQRRRSL
        +MRW NRRRFTA  PP+EQFDMDVTQEYINWYKNI++LYI QPGA++S+LRSNN RL+NVADDPQQVLNICNDNEQY+ENIHYMYDVPIV AP+QRRR L
Subjt:  MMRWLNRRRFTAIRPPVEQFDMDVTQEYINWYKNITRLYIIQPGAIVSYLRSNNNRLKNVADDPQQVLNICNDNEQYIENIHYMYDVPIVHAPIQRRRSL

Query:  VQESDQL-------EEVPPVTQTQSEHGYVSPVMMI-----------VGQSSDFGTGYYNSKAGSSSSNFRQQYCDLGSDSSSSYMHCHGRGRGEHNEYL
        VQE DQL       EEVPP+TQTQSEH YVSPVMM+           VGQSSDFG GYYNS+AG SS++F QQY DLGSD SSSYMH HGRGRGEHNEYL
Subjt:  VQESDQL-------EEVPPVTQTQSEHGYVSPVMMI-----------VGQSSDFGTGYYNSKAGSSSSNFRQQYCDLGSDSSSSYMHCHGRGRGEHNEYL

Query:  YYEVPAAILE---------------QSDEQQQQENQEEIQQQRVQS--RQPTRN
        YYEVPAA+ E               QSDEQQQQENQEEIQQQRVQS  RQP RN
Subjt:  YYEVPAAILE---------------QSDEQQQQENQEEIQQQRVQS--RQPTRN

TYJ95836.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]7.7e-8872.44Show/hide
Query:  MMRWLNRRRFTAIRPPVEQFDMDVTQEYINWYKNITRLYIIQPGAIVSYLRSNNNRLKNVADDPQQVLNICNDNEQYIENIHYMYDVPIVHAPIQRRRSL
        +MRW NRRRFTA  PP+EQFDMDVTQEYI+WYKNI++LYI QPGA +S+LRSNN RL+NVADDPQQVLNICNDNEQY+ENIHYMYDVPIV AP+QRRR L
Subjt:  MMRWLNRRRFTAIRPPVEQFDMDVTQEYINWYKNITRLYIIQPGAIVSYLRSNNNRLKNVADDPQQVLNICNDNEQYIENIHYMYDVPIVHAPIQRRRSL

Query:  VQESDQLE-------EVPPVTQTQSEHGYVSPVMMI-----------VGQSSDFGTGYYNSKAGSSSSNFRQQYCDLGSDSSSSYMHCHGRGRGEHNEYL
        VQE DQLE       EVPP+TQTQSEH YVSPVMM+           VGQSSDFG GYYNSKAG SS++F QQY DLGSD SSSYMH HGRGRG+HNEYL
Subjt:  VQESDQLE-------EVPPVTQTQSEHGYVSPVMMI-----------VGQSSDFGTGYYNSKAGSSSSNFRQQYCDLGSDSSSSYMHCHGRGRGEHNEYL

Query:  YYEVPAAILE---------------QSDEQQQQENQEEIQQQRVQS--RQPTRN
        YYEVPAA+ E               QSDEQQQQEN EEIQQQRVQS  RQP RN
Subjt:  YYEVPAAILE---------------QSDEQQQQENQEEIQQQRVQS--RQPTRN

XP_008449513.1 PREDICTED: mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo]3.6e-8571.49Show/hide
Query:  MRWLNRRRFTAIRPPVEQFDMDVTQEYINWYKNITRLYIIQPGAIVSYLRSNNNRLKNVADDPQQVLNICNDNEQYIENIHYMYDVPIVHAPIQRRRSLV
        MRW NRRRFTA  PP+EQFDMDVTQEYI+WYKNI++LYI QPGA +S+LRSNN RL+N+ADDPQQVLNICNDNEQY+ENIHYMYDVPIV AP+QRRR LV
Subjt:  MRWLNRRRFTAIRPPVEQFDMDVTQEYINWYKNITRLYIIQPGAIVSYLRSNNNRLKNVADDPQQVLNICNDNEQYIENIHYMYDVPIVHAPIQRRRSLV

Query:  QESDQL-------EEVPPV--TQTQSEHGYVSPVMMI-----------VGQSSDFGTGYYNSKAGSSSSNFRQQYCDLGSDSSSSYMHCHGRGRGEHNEY
        QESDQL       EEVPP+  TQTQSEH YVSPVMM+           VGQSSDFG GYYNS+AG SS++F QQY DLGSD SSSYMH HGRGRGEHNEY
Subjt:  QESDQL-------EEVPPV--TQTQSEHGYVSPVMMI-----------VGQSSDFGTGYYNSKAGSSSSNFRQQYCDLGSDSSSSYMHCHGRGRGEHNEY

Query:  LYYEVP---------------AAILEQSDEQQQQENQEEIQQQRVQSRQ
        LYY+VP               AA+ EQSDEQQQQEN EEIQQQRVQ R+
Subjt:  LYYEVP---------------AAILEQSDEQQQQENQEEIQQQRVQSRQ

TrEMBL top hitse value%identityAlignment
A0A5A7T598 Serine/threonine-protein phosphatase 7 long form-like protein3.7e-8872.44Show/hide
Query:  MMRWLNRRRFTAIRPPVEQFDMDVTQEYINWYKNITRLYIIQPGAIVSYLRSNNNRLKNVADDPQQVLNICNDNEQYIENIHYMYDVPIVHAPIQRRRSL
        +MRW NRRRFTA  PP+EQFDMDVTQEYI+WYKNI++LYI QPGA +S+LRSNN RL+NVADDPQQVLNICNDNEQY+ENIHYMYDVPIV AP+QRRR L
Subjt:  MMRWLNRRRFTAIRPPVEQFDMDVTQEYINWYKNITRLYIIQPGAIVSYLRSNNNRLKNVADDPQQVLNICNDNEQYIENIHYMYDVPIVHAPIQRRRSL

Query:  VQESDQLE-------EVPPVTQTQSEHGYVSPVMMI-----------VGQSSDFGTGYYNSKAGSSSSNFRQQYCDLGSDSSSSYMHCHGRGRGEHNEYL
        VQE DQLE       EVPP+TQTQSEH YVSPVMM+           VGQSSDFG GYYNSKAG SS++F QQY DLGSD SSSYMH HGRGRG+HNEYL
Subjt:  VQESDQLE-------EVPPVTQTQSEHGYVSPVMMI-----------VGQSSDFGTGYYNSKAGSSSSNFRQQYCDLGSDSSSSYMHCHGRGRGEHNEYL

Query:  YYEVPAAILE---------------QSDEQQQQENQEEIQQQRVQS--RQPTRN
        YYEVPAA+ E               QSDEQQQQEN EEIQQQRVQS  RQP RN
Subjt:  YYEVPAAILE---------------QSDEQQQQENQEEIQQQRVQS--RQPTRN

A0A5A7U9Y2 Mediator of RNA polymerase II transcription subunit 12-like isoform X13.1e-9581.43Show/hide
Query:  MMRWLNRRRFTAIRPPVEQFDMDVTQEYINWYKNITRLYIIQPGAIVSYLRSNNNRLKNVADDPQQVLNICNDNEQYIENIHYMYDVPIVHAPIQRRRSL
        MMRWLNRRRFTAIRPPVEQFDMDVTQEYINWYKNITRLYIIQPGA+                    VLNICNDNEQYIENIHYMYDVPIVHAPIQRRRSL
Subjt:  MMRWLNRRRFTAIRPPVEQFDMDVTQEYINWYKNITRLYIIQPGAIVSYLRSNNNRLKNVADDPQQVLNICNDNEQYIENIHYMYDVPIVHAPIQRRRSL

Query:  VQESDQL-------EEVPPVTQTQSEHGYVSPVMMI-----------VGQSSDFGTGYYNSKAGSSSSNFRQQYCDLGSDSSSSYMHCHGRGRGEHNEYL
        VQESDQL       EEVPPVTQTQS+HGYVSPVMM+           VGQSSDFGTGYYNS+AG SSSNFRQQYCDLGSDSSSSYMHCHGRGRGEHNEYL
Subjt:  VQESDQL-------EEVPPVTQTQSEHGYVSPVMMI-----------VGQSSDFGTGYYNSKAGSSSSNFRQQYCDLGSDSSSSYMHCHGRGRGEHNEYL

Query:  YYEVPAAILEQSDEQQQQENQEEIQQQRVQSRQPTRN
        YYEVPAAILEQ DEQQQQENQEEIQQQRVQSRQPTRN
Subjt:  YYEVPAAILEQSDEQQQQENQEEIQQQRVQSRQPTRN

A0A5A7VIP6 Mediator of RNA polymerase II transcription subunit 12-like isoform X18.9e-9073.23Show/hide
Query:  MMRWLNRRRFTAIRPPVEQFDMDVTQEYINWYKNITRLYIIQPGAIVSYLRSNNNRLKNVADDPQQVLNICNDNEQYIENIHYMYDVPIVHAPIQRRRSL
        +MRW NRRRFTA  PP+EQFDMDVTQEYINWYKNI++LYI QPGA++S+LRSNN RL+NVADDPQQVLNICNDNEQY+ENIHYMYDVPIV AP+QRRR L
Subjt:  MMRWLNRRRFTAIRPPVEQFDMDVTQEYINWYKNITRLYIIQPGAIVSYLRSNNNRLKNVADDPQQVLNICNDNEQYIENIHYMYDVPIVHAPIQRRRSL

Query:  VQESDQL-------EEVPPVTQTQSEHGYVSPVMMI-----------VGQSSDFGTGYYNSKAGSSSSNFRQQYCDLGSDSSSSYMHCHGRGRGEHNEYL
        VQE DQL       EEVPP+TQTQSEH YVSPVMM+           VGQSSDFG GYYNS+AG SS++F QQY DLGSD SSSYMH HGRGRGEHNEYL
Subjt:  VQESDQL-------EEVPPVTQTQSEHGYVSPVMMI-----------VGQSSDFGTGYYNSKAGSSSSNFRQQYCDLGSDSSSSYMHCHGRGRGEHNEYL

Query:  YYEVPAAILE---------------QSDEQQQQENQEEIQQQRVQS--RQPTRN
        YYEVPAA+ E               QSDEQQQQENQEEIQQQRVQS  RQP RN
Subjt:  YYEVPAAILE---------------QSDEQQQQENQEEIQQQRVQS--RQPTRN

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein3.7e-8872.44Show/hide
Query:  MMRWLNRRRFTAIRPPVEQFDMDVTQEYINWYKNITRLYIIQPGAIVSYLRSNNNRLKNVADDPQQVLNICNDNEQYIENIHYMYDVPIVHAPIQRRRSL
        +MRW NRRRFTA  PP+EQFDMDVTQEYI+WYKNI++LYI QPGA +S+LRSNN RL+NVADDPQQVLNICNDNEQY+ENIHYMYDVPIV AP+QRRR L
Subjt:  MMRWLNRRRFTAIRPPVEQFDMDVTQEYINWYKNITRLYIIQPGAIVSYLRSNNNRLKNVADDPQQVLNICNDNEQYIENIHYMYDVPIVHAPIQRRRSL

Query:  VQESDQLE-------EVPPVTQTQSEHGYVSPVMMI-----------VGQSSDFGTGYYNSKAGSSSSNFRQQYCDLGSDSSSSYMHCHGRGRGEHNEYL
        VQE DQLE       EVPP+TQTQSEH YVSPVMM+           VGQSSDFG GYYNSKAG SS++F QQY DLGSD SSSYMH HGRGRG+HNEYL
Subjt:  VQESDQLE-------EVPPVTQTQSEHGYVSPVMMI-----------VGQSSDFGTGYYNSKAGSSSSNFRQQYCDLGSDSSSSYMHCHGRGRGEHNEYL

Query:  YYEVPAAILE---------------QSDEQQQQENQEEIQQQRVQS--RQPTRN
        YYEVPAA+ E               QSDEQQQQEN EEIQQQRVQS  RQP RN
Subjt:  YYEVPAAILE---------------QSDEQQQQENQEEIQQQRVQS--RQPTRN

A0A5D3DUI1 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.7e-8571.2Show/hide
Query:  MMRWLNRRRFTAIRPPVEQFDMDVTQEYINWYKNITRLYIIQPGAIVSYLRSNNNRLKNVADDPQQVLNICNDNEQYIENIHYMYDVPIVHAPIQRRRSL
        +MRW NRRRFTA  PP+EQFDMDVTQEYI+WYKNI++LYI QPGA +S+LRSNN RL+N+ADDPQQVLNICNDNEQY+ENIHYMYDVPIV AP+QRRR L
Subjt:  MMRWLNRRRFTAIRPPVEQFDMDVTQEYINWYKNITRLYIIQPGAIVSYLRSNNNRLKNVADDPQQVLNICNDNEQYIENIHYMYDVPIVHAPIQRRRSL

Query:  VQESDQL-------EEVPPV--TQTQSEHGYVSPVMMI-----------VGQSSDFGTGYYNSKAGSSSSNFRQQYCDLGSDSSSSYMHCHGRGRGEHNE
        VQESDQL       EEVPP+  TQTQSEH YVSPVMM+           VGQSSDFG GYYNS+AG SS++F QQY DLGSD SSSYMH HGRGRGEHNE
Subjt:  VQESDQL-------EEVPPV--TQTQSEHGYVSPVMMI-----------VGQSSDFGTGYYNSKAGSSSSNFRQQYCDLGSDSSSSYMHCHGRGRGEHNE

Query:  YLYYEVP---------------AAILEQSDEQQQQENQEEIQQQRVQSRQ
        YLYY+VP               AA+ EQSDEQQQQEN EEIQQQRVQ R+
Subjt:  YLYYEVP---------------AAILEQSDEQQQQENQEEIQQQRVQSRQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCGATGGCTAAATCGCAGAAGGTTTACTGCTATAAGACCTCCAGTTGAGCAATTTGATATGGATGTAACTCAAGAATACATCAATTGGTACAAAAACATT
ACCAGGCTCTATATTATCCAACCAGGAGCTATTGTGAGTTATCTGAGATCAAATAATAATAGACTTAAGAATGTTGCAGATGATCCACAACAGGTCCTAAATATA
TGCAACGATAACGAGCAATACATAGAGAACATTCACTATATGTACGATGTCCCTATTGTACATGCTCCAATTCAGAGGAGACGTTCTCTAGTGCAAGAGTCCGAT
CAATTGGAAGAAGTGCCTCCCGTGACACAGACACAAAGCGAGCATGGTTACGTTAGTCCAGTAATGATGATAGTCGGTCAATCGTCAGACTTTGGAACAGGATAT
TATAATTCAAAGGCAGGTTCGTCATCATCAAACTTTAGACAACAATACTGTGATTTAGGGAGCGATTCATCGTCTTCATACATGCATTGTCACGGGCGTGGTCGT
GGAGAACATAATGAATATTTGTACTACGAAGTGCCTGCAGCGATACTCGAGCAATCAGATGAGCAACAACAACAAGAGAATCAGGAGGAAATACAGCAACAAAGA
GTTCAGAGTCGACAACCAACTAGAAAT
mRNA sequenceShow/hide mRNA sequence
AGTTGCTCATTTAATGATGCGATGGCTAAATCGCAGAAGGTTTACTGCTATAAGACCTCCAGTTGAGCAATTTGATATGGATGTAACTCAAGAATACATCAATTG
GTACAAAAACATTACCAGGCTCTATATTATCCAACCAGGAGCTATTGTGAGTTATCTGAGATCAAATAATAATAGACTTAAGAATGTTGCAGATGATCCACAACA
GGTCCTAAATATATGCAACGATAACGAGCAATACATAGAGAACATTCACTATATGTACGATGTCCCTATTGTACATGCTCCAATTCAGAGGAGACGTTCTCTAGT
GCAAGAGTCCGATCAATTGGAAGAAGTGCCTCCCGTGACACAGACACAAAGCGAGCATGGTTACGTTAGTCCAGTAATGATGATAGTCGGTCAATCGTCAGACTT
TGGAACAGGATATTATAATTCAAAGGCAGGTTCGTCATCATCAAACTTTAGACAACAATACTGTGATTTAGGGAGCGATTCATCGTCTTCATACATGCATTGTCA
CGGGCGTGGTCGTGGAGAACATAATGAATATTTGTACTACGAAGTGCCTGCAGCGATACTCGAGCAATCAGATGAGCAACAACAACAAGAGAATCAGGAGGAAAT
ACAGCAACAAAGAGTTCAGAGTCGACAACCAACTAGAAAT
Protein sequenceShow/hide protein sequence
MMRWLNRRRFTAIRPPVEQFDMDVTQEYINWYKNITRLYIIQPGAIVSYLRSNNNRLKNVADDPQQVLNICNDNEQYIENIHYMYDVPIVHAPIQRRRSLVQESD
QLEEVPPVTQTQSEHGYVSPVMMIVGQSSDFGTGYYNSKAGSSSSNFRQQYCDLGSDSSSSYMHCHGRGRGEHNEYLYYEVPAAILEQSDEQQQQENQEEIQQQR
VQSRQPTRN