; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C022425.jh1 (gene) of Melon (Harukei-3) v1.41 genome

Gene IDMELO3C022425.jh1
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Descriptionselenoprotein F-like
Genome locationchr11:33598773..33602136
RNA-Seq ExpressionMELO3C022425.jh1
SyntenyMELO3C022425.jh1
Gene Ontology termsGO:0005788 - endoplasmic reticulum lumen (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0016491 - oxidoreductase activity (molecular function)
InterPro domainsIPR014912 - Selenoprotein F/M domain
IPR036249 - Thioredoxin-like superfamily
IPR038219 - Selenoprotein F/M, thioredoxin-like domain superfamily
IPR039992 - Selenoprotein F/M


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039920.1 15 kDa selenoprotein [Cucumis melo var. makuwa]4.29e-11692.86Show/hide
Query:  MQLLPGVWNPATAVTVTLAAAAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQ-----------ELVADCLKCCAEDSDDATSKIT
        MQLLPGVWNPATAVTV LAA AIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQ           ELVADCLKCCAEDSDDATSKIT
Subjt:  MQLLPGVWNPATAVTVTLAAAAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQ-----------ELVADCLKCCAEDSDDATSKIT

Query:  YSGAVLEVCMRKLVFYPEIVGFIEEDKDQFPSVKVQYTFNSPPKLILLDDEGQHKESIRIDNWKREHFLQFLQEKVKRSSAI
        YSGAVLEVCMRKLVFYPEIVGFIEEDKDQFPSVKVQYTFNSPPKLILLDDEGQHKESIRIDNWKREHFLQFLQEKVKRSSAI
Subjt:  YSGAVLEVCMRKLVFYPEIVGFIEEDKDQFPSVKVQYTFNSPPKLILLDDEGQHKESIRIDNWKREHFLQFLQEKVKRSSAI

XP_004140597.1 selenoprotein F [Cucumis sativus]9.77e-11594.74Show/hide
Query:  MQLLPGVWNPATAVTVTLAAAAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCAEDSDDATSKITYSGAVLEVCMR
        MQLLPGVWN A AVTV L A AIIFISSMPL WSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV+DCLKCCAEDSDDATSKITYSGAVLEVCMR
Subjt:  MQLLPGVWNPATAVTVTLAAAAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCAEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEEDKDQFPSVKVQYTFNSPPKLILLDDEGQHKESIRIDNWKREHFLQFLQEKVKRSSAI
        KLVFYPEIVGFIE+DKDQFPSVKVQYTFNSPPKLILLDD+GQHKESIRIDNWKREHFLQFLQEKVKRSSAI
Subjt:  KLVFYPEIVGFIEEDKDQFPSVKVQYTFNSPPKLILLDDEGQHKESIRIDNWKREHFLQFLQEKVKRSSAI

XP_008460012.1 PREDICTED: 15 kDa selenoprotein [Cucumis melo]5.46e-121100Show/hide
Query:  MQLLPGVWNPATAVTVTLAAAAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCAEDSDDATSKITYSGAVLEVCMR
        MQLLPGVWNPATAVTVTLAAAAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCAEDSDDATSKITYSGAVLEVCMR
Subjt:  MQLLPGVWNPATAVTVTLAAAAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCAEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEEDKDQFPSVKVQYTFNSPPKLILLDDEGQHKESIRIDNWKREHFLQFLQEKVKRSSAI
        KLVFYPEIVGFIEEDKDQFPSVKVQYTFNSPPKLILLDDEGQHKESIRIDNWKREHFLQFLQEKVKRSSAI
Subjt:  KLVFYPEIVGFIEEDKDQFPSVKVQYTFNSPPKLILLDDEGQHKESIRIDNWKREHFLQFLQEKVKRSSAI

XP_022954272.1 selenoprotein F-like [Cucurbita moschata]5.23e-10590.12Show/hide
Query:  MQLLPGVWNPATAVTVTLAAAAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCAEDSDDATSKITYSGAVLEVCMR
        MQLL GV NPAT VT+   A AIIFI+SMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV DCLKCC EDSDDATSKITYSGA+LEVCMR
Subjt:  MQLLPGVWNPATAVTVTLAAAAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCAEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEEDKDQFPSVKVQYTFNSPPKLILLDDEGQHKESIRIDNWKREHFLQFLQEKVK-RSSAI
        KLVFYPEIVGFIEE+KDQFPSV VQYTFNSPPKLILLDDEGQHKESIRIDNWKREH LQFL+EKVK RSSAI
Subjt:  KLVFYPEIVGFIEEDKDQFPSVKVQYTFNSPPKLILLDDEGQHKESIRIDNWKREHFLQFLQEKVK-RSSAI

XP_038875398.1 selenoprotein F [Benincasa hispida]1.10e-11192.4Show/hide
Query:  MQLLPGVWNPATAVTVTLAAAAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCAEDSDDATSKITYSGAVLEVCMR
        MQLLPGV NPATAVT+ +AA  +IFI+SMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV DCLKCC EDSDDATSKITYSGAVLEVCMR
Subjt:  MQLLPGVWNPATAVTVTLAAAAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCAEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEEDKDQFPSVKVQYTFNSPPKLILLDDEGQHKESIRIDNWKREHFLQFLQEKVKRSSAI
        KLVFYPEIVGFIEE+KDQFPSVKVQY FNSPPKLILLDDEGQHKESIRIDNWKREH LQFLQEKVKRSSAI
Subjt:  KLVFYPEIVGFIEEDKDQFPSVKVQYTFNSPPKLILLDDEGQHKESIRIDNWKREHFLQFLQEKVKRSSAI

TrEMBL top hitse value%identityAlignment
A0A0A0KA30 Sep15_SelM domain-containing protein4.73e-11594.74Show/hide
Query:  MQLLPGVWNPATAVTVTLAAAAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCAEDSDDATSKITYSGAVLEVCMR
        MQLLPGVWN A AVTV L A AIIFISSMPL WSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV+DCLKCCAEDSDDATSKITYSGAVLEVCMR
Subjt:  MQLLPGVWNPATAVTVTLAAAAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCAEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEEDKDQFPSVKVQYTFNSPPKLILLDDEGQHKESIRIDNWKREHFLQFLQEKVKRSSAI
        KLVFYPEIVGFIE+DKDQFPSVKVQYTFNSPPKLILLDD+GQHKESIRIDNWKREHFLQFLQEKVKRSSAI
Subjt:  KLVFYPEIVGFIEEDKDQFPSVKVQYTFNSPPKLILLDDEGQHKESIRIDNWKREHFLQFLQEKVKRSSAI

A0A1S3CC00 15 kDa selenoprotein2.64e-121100Show/hide
Query:  MQLLPGVWNPATAVTVTLAAAAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCAEDSDDATSKITYSGAVLEVCMR
        MQLLPGVWNPATAVTVTLAAAAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCAEDSDDATSKITYSGAVLEVCMR
Subjt:  MQLLPGVWNPATAVTVTLAAAAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCAEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEEDKDQFPSVKVQYTFNSPPKLILLDDEGQHKESIRIDNWKREHFLQFLQEKVKRSSAI
        KLVFYPEIVGFIEEDKDQFPSVKVQYTFNSPPKLILLDDEGQHKESIRIDNWKREHFLQFLQEKVKRSSAI
Subjt:  KLVFYPEIVGFIEEDKDQFPSVKVQYTFNSPPKLILLDDEGQHKESIRIDNWKREHFLQFLQEKVKRSSAI

A0A5A7T9G4 15 kDa selenoprotein2.08e-11692.86Show/hide
Query:  MQLLPGVWNPATAVTVTLAAAAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQ-----------ELVADCLKCCAEDSDDATSKIT
        MQLLPGVWNPATAVTV LAA AIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQ           ELVADCLKCCAEDSDDATSKIT
Subjt:  MQLLPGVWNPATAVTVTLAAAAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQ-----------ELVADCLKCCAEDSDDATSKIT

Query:  YSGAVLEVCMRKLVFYPEIVGFIEEDKDQFPSVKVQYTFNSPPKLILLDDEGQHKESIRIDNWKREHFLQFLQEKVKRSSAI
        YSGAVLEVCMRKLVFYPEIVGFIEEDKDQFPSVKVQYTFNSPPKLILLDDEGQHKESIRIDNWKREHFLQFLQEKVKRSSAI
Subjt:  YSGAVLEVCMRKLVFYPEIVGFIEEDKDQFPSVKVQYTFNSPPKLILLDDEGQHKESIRIDNWKREHFLQFLQEKVKRSSAI

A0A6J1GQK6 selenoprotein F-like2.53e-10590.12Show/hide
Query:  MQLLPGVWNPATAVTVTLAAAAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCAEDSDDATSKITYSGAVLEVCMR
        MQLL GV NPAT VT+   A AIIFI+SMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV DCLKCC EDSDDATSKITYSGA+LEVCMR
Subjt:  MQLLPGVWNPATAVTVTLAAAAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCAEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEEDKDQFPSVKVQYTFNSPPKLILLDDEGQHKESIRIDNWKREHFLQFLQEKVK-RSSAI
        KLVFYPEIVGFIEE+KDQFPSV VQYTFNSPPKLILLDDEGQHKESIRIDNWKREH LQFL+EKVK RSSAI
Subjt:  KLVFYPEIVGFIEEDKDQFPSVKVQYTFNSPPKLILLDDEGQHKESIRIDNWKREHFLQFLQEKVK-RSSAI

A0A6J1JXH9 selenoprotein F-like5.96e-10489.53Show/hide
Query:  MQLLPGVWNPATAVTVTLAAAAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCAEDSDDATSKITYSGAVLEVCMR
        MQLL GV NPAT VT+   A AIIFI+SMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV DCLKCC EDSDDATSKITYSGA+LEVCMR
Subjt:  MQLLPGVWNPATAVTVTLAAAAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCAEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEEDKDQFPSVKVQYTFNSPPKLILLDDEGQHKESIRIDNWKREHFLQFLQEKVK-RSSAI
        KLVFYPEIVGFIEE+K QFPSV VQYTFNSPPKLILLDDEGQHKESIRIDNWKREH LQFL+EKVK RSSAI
Subjt:  KLVFYPEIVGFIEEDKDQFPSVKVQYTFNSPPKLILLDDEGQHKESIRIDNWKREHFLQFLQEKVK-RSSAI

SwissProt top hitse value%identityAlignment
A1Z623 Selenoprotein F4.7e-1936.97Show/hide
Query:  PGVW-NPATAVTVTLAAAAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCAEDSDDATSKITYSGAVLEVCMRKLV
        PG W  PA  + + LA A       M  A+  E  SS  C +LGF+   LC  C  L ++   Q L  DC  CC E++   T K+ Y+GA+LEVC  KL 
Subjt:  PGVW-NPATAVTVTLAAAAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCAEDSDDATSKITYSGAVLEVCMRKLV

Query:  FYPEIVGFIEEDKDQ-FPSVKVQYTFNSPPKLILLDDEGQHKESIRIDNWKREHFLQFLQEKVKR
         +P++  F+  DK + F  ++++Y   S P L LLDD G   E + I  W  +   +FL EK++R
Subjt:  FYPEIVGFIEEDKDQ-FPSVKVQYTFNSPPKLILLDDEGQHKESIRIDNWKREHFLQFLQEKVKR

A8YXY3 Selenoprotein F6.2e-1937.88Show/hide
Query:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCAEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEDKDQ-FPSVKVQYTFNSPPKLI
        + SS  C +LGF+   LCS C  L ++    +L  DC  CC E++   T K+ Y+GA+LEVC  KL  +P++  F+  DK + F  ++++Y   S P L 
Subjt:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCAEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEDKDQ-FPSVKVQYTFNSPPKLI

Query:  LLDDEGQHKESIRIDNWKREHFLQFLQEKVKR
        LLDD G   E + I  W  +   +FL EK++R
Subjt:  LLDDEGQHKESIRIDNWKREHFLQFLQEKVKR

O60613 Selenoprotein F1.1e-1837.88Show/hide
Query:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCAEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEDKDQ-FPSVKVQYTFNSPPKLI
        + SS  C +LGF+   LCS C  L ++    +L  DC  CC E++   T K+ Y+GA+LEVC  KL  +P++  F+  DK + F  ++++Y   S P L 
Subjt:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCAEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEDKDQ-FPSVKVQYTFNSPPKLI

Query:  LLDDEGQHKESIRIDNWKREHFLQFLQEKVKR
        LLDD G   E + I  W  +   +FL EK++R
Subjt:  LLDDEGQHKESIRIDNWKREHFLQFLQEKVKR

Q802F3 Selenoprotein F1.8e-1837.88Show/hide
Query:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCAEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEDKDQ-FPSVKVQYTFNSPPKLI
        +LSS  C +LGF+   LCS C  L ++  +Q L   C +CC E++     K+ Y GA+LEVC  KL  +P++  F+  DK + F  ++++Y   S P L 
Subjt:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCAEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEDKDQ-FPSVKVQYTFNSPPKLI

Query:  LLDDEGQHKESIRIDNWKREHFLQFLQEKVKR
        LLDD G   E + I  W  +   +FL EK++R
Subjt:  LLDDEGQHKESIRIDNWKREHFLQFLQEKVKR

Q923V8 Selenoprotein F2.6e-1737.12Show/hide
Query:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCAEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEDKDQ-FPSVKVQYTFNSPPKLI
        + SS  C +LGF+   LCS C  L ++     L   C  CC E++   T K+ Y+GA+LEVC  KL  +P++  F+  DK + F  ++++Y   S P L 
Subjt:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCAEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEEDKDQ-FPSVKVQYTFNSPPKLI

Query:  LLDDEGQHKESIRIDNWKREHFLQFLQEKVKR
        LLDD G   E + I  W  +   +FL EK++R
Subjt:  LLDDEGQHKESIRIDNWKREHFLQFLQEKVKR

Arabidopsis top hitse value%identityAlignment
AT1G05720.1 selenoprotein family protein9.0e-6672.78Show/hide
Query:  AVTVTLAAAAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCAEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFI
        A  V L+A  I+ ++S   A  KEQLS++ECEDLGF+GLALCSDCH+L+EY+KDQELV+DCLKCCA+DS+D+ SK+TYSGA+LEVCMRKLVFYPEIVGFI
Subjt:  AVTVTLAAAAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCAEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFI

Query:  EEDKDQFPSVKVQYTFNSPPKLILLDDEGQHKESIRIDNWKREHFLQFLQEKVKRSSA
        EE+K++FPSVKVQY FNSPPKLI+LD++G+HKESIRIDNWKREH LQ+++EKVK ++A
Subjt:  EEDKDQFPSVKVQYTFNSPPKLILLDDEGQHKESIRIDNWKREHFLQFLQEKVKRSSA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGCTTCTCCCCGGAGTATGGAATCCCGCTACGGCGGTGACGGTAACGTTAGCTGCGGCGGCGATCATTTTCATCTCGTCAATGCCGTTGGCTTGGTCAAAGGAGCA
ACTCAGCTCGAGGGAATGTGAGGATCTAGGTTTCACCGGCCTTGCTCTCTGTTCCGATTGTCACACTTTAGCTGAATATATCAAAGATCAAGAATTAGTGGCGGACTGTT
TGAAGTGTTGTGCAGAGGATTCTGATGACGCCACGAGTAAGATAACTTATTCTGGTGCCGTGCTGGAGGTCTGCATGAGGAAGCTAGTCTTCTATCCTGAAATTGTTGGC
TTCATCGAAGAGGATAAGGATCAATTCCCTTCAGTTAAGGTTCAATATACCTTCAACTCTCCACCGAAGCTGATTTTGCTGGATGATGAGGGCCAGCATAAAGAAAGCAT
CAGGATTGATAATTGGAAACGAGAACATTTTTTGCAGTTCCTGCAAGAGAAGGTTAAGCGATCTTCCGCAATTTAA
mRNA sequenceShow/hide mRNA sequence
AGAAGTTAAAAATTCGTCTTTTGTAGAGAGAGTTTTCCAATCGTTCGTAGACTTCGCTTTTTCACCCTCAGTCGCCGGCGACAACAGAGATGCAGCTTCTCCCCGGAGTA
TGGAATCCCGCTACGGCGGTGACGGTAACGTTAGCTGCGGCGGCGATCATTTTCATCTCGTCAATGCCGTTGGCTTGGTCAAAGGAGCAACTCAGCTCGAGGGAATGTGA
GGATCTAGGTTTCACCGGCCTTGCTCTCTGTTCCGATTGTCACACTTTAGCTGAATATATCAAAGATCAAGAATTAGTGGCGGACTGTTTGAAGTGTTGTGCAGAGGATT
CTGATGACGCCACGAGTAAGATAACTTATTCTGGTGCCGTGCTGGAGGTCTGCATGAGGAAGCTAGTCTTCTATCCTGAAATTGTTGGCTTCATCGAAGAGGATAAGGAT
CAATTCCCTTCAGTTAAGGTTCAATATACCTTCAACTCTCCACCGAAGCTGATTTTGCTGGATGATGAGGGCCAGCATAAAGAAAGCATCAGGATTGATAATTGGAAACG
AGAACATTTTTTGCAGTTCCTGCAAGAGAAGGTTAAGCGATCTTCCGCAATTTAAGGTTCTTTCACCTTTTTTTTTTTAATATAAATTTTAAATTACAACTCTTAATCAA
TGTAAAAAACTTCTTAGAATTTGAATGAAACTATTATCGGCCATAAAAAGAAAAAAGAAAGAAAAAAAAATTGAGGTGAGTGAACACTGGATTTTGTGAATTTCAAGGTT
AGTAGTGGAAATATAATTGATTTCCTTGTCTAAATCTTTTACTCGATGTTTACTCTCACCGGTGAAACCAATACATTTTAAGCTATTTTGGATGTAATCAATGAGTTTGG
AGTATAATGTAATCCTAAATTTTGTTTGTACGGACCATCTCGAAATCAATTTGTAATATCAAACTTCTTCTTTTCA
Protein sequenceShow/hide protein sequence
MQLLPGVWNPATAVTVTLAAAAIIFISSMPLAWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVADCLKCCAEDSDDATSKITYSGAVLEVCMRKLVFYPEIVG
FIEEDKDQFPSVKVQYTFNSPPKLILLDDEGQHKESIRIDNWKREHFLQFLQEKVKRSSAI