| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0039984.1 RNA polymerase sigma factor sigB isoform X1 [Cucumis melo var. makuwa] | 1.2e-297 | 99.64 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFKTAANNSHHHSFIPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSVERLRSYLGAVES
MSCLLPQFKCHPETFSIQFKTAANNSHHHSF+PTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSVERLRSYLGAVES
Subjt: MSCLLPQFKCHPETFSIQFKTAANNSHHHSFIPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSVERLRSYLGAVES
Query: SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQPSPKPDALHFKWAQFMESERADIIGEPVGVNKRPIEGDALEPSTTESD
SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQPSPKPDALHFKWAQFMESERADIIGEPVGVNKRPIEGDALEPSTTESD
Subjt: SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQPSPKPDALHFKWAQFMESERADIIGEPVGVNKRPIEGDALEPSTTESD
Query: DVEPTSKELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVVPFKSGSSSRKKRSSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLK
DVEPTS+ELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVVPFKSGSSSRKKRSSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLK
Subjt: DVEPTSKELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVVPFKSGSSSRKKRSSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLK
Query: LERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
LERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
Subjt: LERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
Query: WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAED
WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAED
Subjt: WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAED
Query: MLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMG
MLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMG
Subjt: MLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMG
|
|
| XP_004154029.1 RNA polymerase sigma factor sigB [Cucumis sativus] | 1.3e-307 | 97.07 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFKTAANNSHHHSFIPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSVERLRSYLGAVES
MSCLLPQFKCHPETFSIQFKTAAN SHHHSF+PTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTL+VDRLKLPPFDTNTDSVSVERLRSYLGAVES
Subjt: MSCLLPQFKCHPETFSIQFKTAANNSHHHSFIPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSVERLRSYLGAVES
Query: SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQPSPKPDALHFKWAQFMESERADIIGEPVGVNKRPIEGDALEPSTTESD
SLASTLLTSEEA+IAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQ SPKPDALHFKWAQFMESERADIIGEPVGVNKRP+EGDALEPSTTESD
Subjt: SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQPSPKPDALHFKWAQFMESERADIIGEPVGVNKRPIEGDALEPSTTESD
Query: DVEPTSKELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVVPFKSGSSSRKKRSSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLK
D+EPTS+ELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSV+ FKSGSSSRKKR+S+QEVDYSDPLRYLRATT+TSRLLTATEELELSEGIQDLLK
Subjt: DVEPTSKELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVVPFKSGSSSRKKRSSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLK
Query: LERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
LERLQEEL ERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
Subjt: LERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
Query: WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAED
WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLL ENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAET ED
Subjt: WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAED
Query: MLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
MLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQY+MS
Subjt: MLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
|
|
| XP_008460092.1 PREDICTED: RNA polymerase sigma factor sigB isoform X1 [Cucumis melo] | 0.0e+00 | 100 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFKTAANNSHHHSFIPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSVERLRSYLGAVES
MSCLLPQFKCHPETFSIQFKTAANNSHHHSFIPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSVERLRSYLGAVES
Subjt: MSCLLPQFKCHPETFSIQFKTAANNSHHHSFIPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSVERLRSYLGAVES
Query: SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQPSPKPDALHFKWAQFMESERADIIGEPVGVNKRPIEGDALEPSTTESD
SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQPSPKPDALHFKWAQFMESERADIIGEPVGVNKRPIEGDALEPSTTESD
Subjt: SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQPSPKPDALHFKWAQFMESERADIIGEPVGVNKRPIEGDALEPSTTESD
Query: DVEPTSKELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVVPFKSGSSSRKKRSSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLK
DVEPTSKELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVVPFKSGSSSRKKRSSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLK
Subjt: DVEPTSKELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVVPFKSGSSSRKKRSSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLK
Query: LERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
LERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
Subjt: LERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
Query: WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAED
WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAED
Subjt: WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAED
Query: MLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
MLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
Subjt: MLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
|
|
| XP_008460093.1 PREDICTED: RNA polymerase sigma factor sigB isoform X2 [Cucumis melo] | 7.3e-303 | 97.07 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFKTAANNSHHHSFIPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSVERLRSYLGAVES
MSCLLPQFKCHPETFSIQFKTAANNSHHHSFIPTAYSSYT SPPTSTGTATTLNVDRLKLPPFDTNTDSVSVERLRSYLGAVES
Subjt: MSCLLPQFKCHPETFSIQFKTAANNSHHHSFIPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSVERLRSYLGAVES
Query: SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQPSPKPDALHFKWAQFMESERADIIGEPVGVNKRPIEGDALEPSTTESD
SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQPSPKPDALHFKWAQFMESERADIIGEPVGVNKRPIEGDALEPSTTESD
Subjt: SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQPSPKPDALHFKWAQFMESERADIIGEPVGVNKRPIEGDALEPSTTESD
Query: DVEPTSKELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVVPFKSGSSSRKKRSSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLK
DVEPTSKELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVVPFKSGSSSRKKRSSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLK
Subjt: DVEPTSKELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVVPFKSGSSSRKKRSSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLK
Query: LERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
LERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
Subjt: LERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
Query: WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAED
WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAED
Subjt: WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAED
Query: MLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
MLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
Subjt: MLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
|
|
| XP_038875580.1 RNA polymerase sigma factor sigB isoform X1 [Benincasa hispida] | 2.0e-297 | 94.49 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFKTAANNS-HHHSFIPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSVERLRSYLGAVE
MSCLLPQFKCHPETFSIQFKTAAN + HHH+F+PTA SSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNVDRL LPPFDTNTDSVSVERLRSYLGAVE
Subjt: MSCLLPQFKCHPETFSIQFKTAANNS-HHHSFIPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSVERLRSYLGAVE
Query: SSLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQPSPKPDALHFKWAQFMESERADIIGEPVGVNKRPIEGDALEPSTTES
SSLASTLLTSEEATIAAAAAEAV LAKAAVKVARDAALLANN NSSRAG KS+ SP+PDALHFKWAQFMESERADIIGEPVGVN RP+E DAL+PSTT+S
Subjt: SSLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQPSPKPDALHFKWAQFMESERADIIGEPVGVNKRPIEGDALEPSTTES
Query: DDVEPTSKELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVVPFKSGSSSRKKRSSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLL
DD+EPTS+ELELLQDELSESITV+SKRQTERKARRTRAAEKT TSVV KSGSSSRKKR+SLQEVDYSDPLRYLRATTSTSRLLTA EELELSEGIQDLL
Subjt: DDVEPTSKELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVVPFKSGSSSRKKRSSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLL
Query: KLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAH
KLERLQEELA+RYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAH
Subjt: KLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAH
Query: WWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAE
WWIKQAVRK LSDQSRTIRLPFHMVEATYRVKEARKQL SENGRHPDD+EIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAE
Subjt: WWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAE
Query: DMLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
DMLIKQFMKQDLEKVLDSLNPRE+QVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYL+S
Subjt: DMLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0K917 RNA polymerase sigma factor | 6.2e-308 | 97.07 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFKTAANNSHHHSFIPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSVERLRSYLGAVES
MSCLLPQFKCHPETFSIQFKTAAN SHHHSF+PTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTL+VDRLKLPPFDTNTDSVSVERLRSYLGAVES
Subjt: MSCLLPQFKCHPETFSIQFKTAANNSHHHSFIPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSVERLRSYLGAVES
Query: SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQPSPKPDALHFKWAQFMESERADIIGEPVGVNKRPIEGDALEPSTTESD
SLASTLLTSEEA+IAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQ SPKPDALHFKWAQFMESERADIIGEPVGVNKRP+EGDALEPSTTESD
Subjt: SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQPSPKPDALHFKWAQFMESERADIIGEPVGVNKRPIEGDALEPSTTESD
Query: DVEPTSKELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVVPFKSGSSSRKKRSSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLK
D+EPTS+ELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSV+ FKSGSSSRKKR+S+QEVDYSDPLRYLRATT+TSRLLTATEELELSEGIQDLLK
Subjt: DVEPTSKELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVVPFKSGSSSRKKRSSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLK
Query: LERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
LERLQEEL ERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
Subjt: LERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
Query: WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAED
WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLL ENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAET ED
Subjt: WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAED
Query: MLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
MLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQY+MS
Subjt: MLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
|
|
| A0A1S3CBA5 RNA polymerase sigma factor | 3.5e-303 | 97.07 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFKTAANNSHHHSFIPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSVERLRSYLGAVES
MSCLLPQFKCHPETFSIQFKTAANNSHHHSFIPTAYSSYT SPPTSTGTATTLNVDRLKLPPFDTNTDSVSVERLRSYLGAVES
Subjt: MSCLLPQFKCHPETFSIQFKTAANNSHHHSFIPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSVERLRSYLGAVES
Query: SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQPSPKPDALHFKWAQFMESERADIIGEPVGVNKRPIEGDALEPSTTESD
SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQPSPKPDALHFKWAQFMESERADIIGEPVGVNKRPIEGDALEPSTTESD
Subjt: SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQPSPKPDALHFKWAQFMESERADIIGEPVGVNKRPIEGDALEPSTTESD
Query: DVEPTSKELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVVPFKSGSSSRKKRSSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLK
DVEPTSKELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVVPFKSGSSSRKKRSSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLK
Subjt: DVEPTSKELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVVPFKSGSSSRKKRSSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLK
Query: LERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
LERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
Subjt: LERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
Query: WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAED
WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAED
Subjt: WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAED
Query: MLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
MLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
Subjt: MLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
|
|
| A0A1S3CD00 RNA polymerase sigma factor | 0.0e+00 | 100 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFKTAANNSHHHSFIPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSVERLRSYLGAVES
MSCLLPQFKCHPETFSIQFKTAANNSHHHSFIPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSVERLRSYLGAVES
Subjt: MSCLLPQFKCHPETFSIQFKTAANNSHHHSFIPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSVERLRSYLGAVES
Query: SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQPSPKPDALHFKWAQFMESERADIIGEPVGVNKRPIEGDALEPSTTESD
SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQPSPKPDALHFKWAQFMESERADIIGEPVGVNKRPIEGDALEPSTTESD
Subjt: SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQPSPKPDALHFKWAQFMESERADIIGEPVGVNKRPIEGDALEPSTTESD
Query: DVEPTSKELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVVPFKSGSSSRKKRSSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLK
DVEPTSKELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVVPFKSGSSSRKKRSSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLK
Subjt: DVEPTSKELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVVPFKSGSSSRKKRSSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLK
Query: LERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
LERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
Subjt: LERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
Query: WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAED
WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAED
Subjt: WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAED
Query: MLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
MLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
Subjt: MLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
|
|
| A0A5A7T955 RNA polymerase sigma factor | 5.8e-298 | 99.64 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFKTAANNSHHHSFIPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSVERLRSYLGAVES
MSCLLPQFKCHPETFSIQFKTAANNSHHHSF+PTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSVERLRSYLGAVES
Subjt: MSCLLPQFKCHPETFSIQFKTAANNSHHHSFIPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSVERLRSYLGAVES
Query: SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQPSPKPDALHFKWAQFMESERADIIGEPVGVNKRPIEGDALEPSTTESD
SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQPSPKPDALHFKWAQFMESERADIIGEPVGVNKRPIEGDALEPSTTESD
Subjt: SLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQPSPKPDALHFKWAQFMESERADIIGEPVGVNKRPIEGDALEPSTTESD
Query: DVEPTSKELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVVPFKSGSSSRKKRSSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLK
DVEPTS+ELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVVPFKSGSSSRKKRSSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLK
Subjt: DVEPTSKELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVVPFKSGSSSRKKRSSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLK
Query: LERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
LERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
Subjt: LERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
Query: WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAED
WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAED
Subjt: WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAED
Query: MLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMG
MLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMG
Subjt: MLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMG
|
|
| A0A6J1DSR7 RNA polymerase sigma factor | 1.0e-278 | 88.59 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFK-------TAANNSHHHSFIPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSVERLRS
MSCLLPQFKCHPETFSIQFK T AN SHHH+F+PTA SS TKVRDPHSLRTQCILSAASP TSTGTATT NV+RLKLPP D NTDS+S ERLRS
Subjt: MSCLLPQFKCHPETFSIQFK-------TAANNSHHHSFIPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSVERLRS
Query: YLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQPSPKPDALHFKWAQFMESERADIIGEPVGVNKRPIEGDALE
YL AVESS ASTLLTSEEATIAAAAAEAVTLAKAAVKVA+DAALL NN NSS+ G KSQ S K DALHFKW QFMESERADIIG PVGVN RP EGDAL+
Subjt: YLGAVESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQPSPKPDALHFKWAQFMESERADIIGEPVGVNKRPIEGDALE
Query: PSTTESDDVEPTSKELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVVPFKSGSSSRKKRSSLQEVDYSDPLRYLRATTSTSRLLTATEELELSE
T ESD +PT++ELELLQDELS +I V+S+RQTER+A+RTRAAEK TSVV KSGSSSRKKR+S+QEVDYSDPLRYLRATTS SRLLTATEELELSE
Subjt: PSTTESDDVEPTSKELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVVPFKSGSSSRKKRSSLQEVDYSDPLRYLRATTSTSRLLTATEELELSE
Query: GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK
GIQDLLKLERLQEEL ERYG EPTFAQWAAAAGVNQRTLRKRLNYGT CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK
Subjt: GIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK
Query: FSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP
FSTYAHWWIKQAVRK LSDQSRTIRLPFHMVEATYRVKEARKQL SENGRHPDD+EIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP
Subjt: FSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP
Query: EAETAEDMLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
EAET+ED+LIKQFMKQDLEKVLDSLNPRE+QVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
Subjt: EAETAEDMLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| O22056 RNA polymerase sigma factor sigB | 8.4e-185 | 62.79 | Show/hide |
Query: SCLLPQFKCHPETFSIQFKTAANNSHHHSFIPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSVERLRSYLGA----
SCLLPQFKC P++FSI F+T SF ++ + P QC +S SP T + L+V +L+LP FDT++DS+ +R +Y
Subjt: SCLLPQFKCHPETFSIQFKTAANNSHHHSFIPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSVERLRSYLGA----
Query: -----VESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALL--ANNINSSRAGTKSQPSPKPDALHFKWAQFMESERADIIGEPVGVNKRPIEGD
+E+ + TLLTS+EA + AAAAEAV LA+AAVKVA+DA L +NN N + T + S KW QF E ERA I+G + V+ I D
Subjt: -----VESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALL--ANNINSSRAGTKSQPSPKPDALHFKWAQFMESERADIIGEPVGVNKRPIEGD
Query: ALEPSTTESDDV----EPTSKELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVVPFKSGSSSRKKRSSLQEVDYSDPLRYLRATTSTSRLLTAT
+ S + + + +E+ELL+++ S S+ V+S RQTERKARR + EKT + + K+GSS +KKR QEVD++DPLRYLR TTS+S+LLT
Subjt: ALEPSTTESDDV----EPTSKELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVVPFKSGSSSRKKRSSLQEVDYSDPLRYLRATTSTSRLLTAT
Query: EELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKF
EE ELS GIQDLLKLERLQ EL ER G +PTFAQWA+AAGV+Q++LR+R+++GTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKF
Subjt: EELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKF
Query: DASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKP
DA+KGFKFSTYAHWWIKQAVRK LSDQSR IRLPFHMVEATYRVKEARKQL SE G+HP ++EIAEA GLSMKRL AVL++PK PRSL+QKIG+NQNLKP
Subjt: DASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKP
Query: SEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
SEVI+DPEA T+ED+LIK+FM+QDL+KVLDSL REKQVIRWRFGMEDGRMKTLQEIGE+MGVSRER+RQIES AFRKLKNKKR HLQQYL++
Subjt: SEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
|
|
| P26683 RNA polymerase sigma factor SigA | 1.1e-75 | 46.39 | Show/hide |
Query: KSG--SSSRKKRSSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKM
KSG + SR++ S ++ D +R RLL A EE+EL+ I DLL+LER++E L+E+ +P ++WA A + R RL+ G KDKM
Subjt: KSG--SSSRKKRSSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKM
Query: IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGRHPD
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+ + ++DQSRTIRLP H+ E R+K+ K L E GR P
Subjt: IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGRHPD
Query: DKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEI
++EIA +++++L + + + P SLE IG ++ + + I + + ET ED + K +++DLEKVLDSL+PRE+ V+R R+G++DGRMKTL+EIG+I
Subjt: DKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEI
Query: MGVSRERIRQIESCAFRKLKNKKRTKHLQQYL
V+RERIRQIE+ A RKL++ R L++Y+
Subjt: MGVSRERIRQIESCAFRKLKNKKRTKHLQQYL
|
|
| P38023 RNA polymerase sigma factor SigA1 | 5.1e-73 | 42.15 | Show/hide |
Query: ELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVVPF-------------KSGSSSRKKRSSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQ
ELL L + T K+KR + +KA T A + T++ P + ++ K ++ +++ D +R RLL A EE+EL+ I
Subjt: ELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVVPF-------------KSGSSSRKKRSSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQ
Query: DLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFST
DLL LER+++EL E+ P+ A+WAAA R+RL G KDKM++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFST
Subjt: DLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFST
Query: YAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAE
YA WWI+QA+ + ++DQSRTIRLP H+ E R+K+ K L E GR P ++EIA +++++L + + + P SLE IG ++ + + I + + E
Subjt: YAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAE
Query: TAEDMLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYL
T ED + K +++DLE VL +L+PRE+ V+R R+G++DGRMKTL+EIG++ V+RERIRQIE+ A RKL++ R L++Y+
Subjt: TAEDMLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYL
|
|
| P52322 RNA polymerase sigma factor SigA | 1.9e-64 | 37.41 | Show/hide |
Query: DVEPTSKELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVVPFKSGSSSRKKRSSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLK
D + +++EL +E S+S K R+ RR A +K T D +R RLL A EE+EL+ I DLLK
Subjt: DVEPTSKELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVVPFKSGSSSRKKRSSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLK
Query: LERLQEE----------------------LAERYGNEPTFA-----------------QWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNY
LER++E+ + E+ EP + +W A + ++RL +G K+KM++SN+RLV+SIAK Y
Subjt: LERLQEE----------------------LAERYGNEPTFA-----------------QWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNY
Query: QGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGRHPDDKEIAEAAGLSMKRL
G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+ + ++DQSRTIRLP H+ E R+K+ K L E R P ++EIA +++++L
Subjt: QGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGRHPDDKEIAEAAGLSMKRL
Query: AAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCA
+ + + P SLE IG ++ + + I + + ET ED + K +++DLE VLD+L+PRE+ V+R R+G++DGRMKTL+EIG+I V+RERIRQIE+ A
Subjt: AAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCA
Query: FRKLKNKKRTKHLQQYL
RKL++ R L++Y+
Subjt: FRKLKNKKRTKHLQQYL
|
|
| Q9LD95 RNA polymerase sigma factor sigF, chloroplastic | 1.6e-63 | 39.04 | Show/hide |
Query: VKSKRQTERKARRTRAAEKTVTSVVPFKSGSSSRKKRSSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQW
V+SKRQ ER+A+ RA + + +S KK+ Q D D L+ T +LLTA EE EL IQ LLKLE+++ +L + G EPT +W
Subjt: VKSKRQTERKARRTRAAEKTVTSVVPFKSGSSSRKKRSSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQW
Query: AAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPF
A A G++ L+ ++ G ++K+I +N+RLV+ IAK YQ G+N QDL+QEG GL++ EKF G +F+TYA+WWI+Q++RK + SRTIRLP
Subjt: AAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPF
Query: HMVEATYRVKEARKQLLSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPR
++ +V EARK + E P +E+A G+S ++L +L + P S++Q I +Q+ E+ D ET + KQ M+ + +L+ L+P+
Subjt: HMVEATYRVKEARKQLLSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPR
Query: EKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQY
E+++I+ RFG++ G+ ++L EIGEI G+S+ER+RQ+ES A +LK + L Y
Subjt: EKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQY
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G08540.1 RNApolymerase sigma subunit 2 | 5.9e-186 | 62.79 | Show/hide |
Query: SCLLPQFKCHPETFSIQFKTAANNSHHHSFIPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSVERLRSYLGA----
SCLLPQFKC P++FSI F+T SF ++ + P QC +S SP T + L+V +L+LP FDT++DS+ +R +Y
Subjt: SCLLPQFKCHPETFSIQFKTAANNSHHHSFIPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLNVDRLKLPPFDTNTDSVSVERLRSYLGA----
Query: -----VESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALL--ANNINSSRAGTKSQPSPKPDALHFKWAQFMESERADIIGEPVGVNKRPIEGD
+E+ + TLLTS+EA + AAAAEAV LA+AAVKVA+DA L +NN N + T + S KW QF E ERA I+G + V+ I D
Subjt: -----VESSLASTLLTSEEATIAAAAAEAVTLAKAAVKVARDAALL--ANNINSSRAGTKSQPSPKPDALHFKWAQFMESERADIIGEPVGVNKRPIEGD
Query: ALEPSTTESDDV----EPTSKELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVVPFKSGSSSRKKRSSLQEVDYSDPLRYLRATTSTSRLLTAT
+ S + + + +E+ELL+++ S S+ V+S RQTERKARR + EKT + + K+GSS +KKR QEVD++DPLRYLR TTS+S+LLT
Subjt: ALEPSTTESDDV----EPTSKELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVVPFKSGSSSRKKRSSLQEVDYSDPLRYLRATTSTSRLLTAT
Query: EELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKF
EE ELS GIQDLLKLERLQ EL ER G +PTFAQWA+AAGV+Q++LR+R+++GTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKF
Subjt: EELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKF
Query: DASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKP
DA+KGFKFSTYAHWWIKQAVRK LSDQSR IRLPFHMVEATYRVKEARKQL SE G+HP ++EIAEA GLSMKRL AVL++PK PRSL+QKIG+NQNLKP
Subjt: DASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKP
Query: SEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
SEVI+DPEA T+ED+LIK+FM+QDL+KVLDSL REKQVIRWRFGMEDGRMKTLQEIGE+MGVSRER+RQIES AFRKLKNKKR HLQQYL++
Subjt: SEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLMS
|
|
| AT1G64860.1 sigma factor A | 5.4e-38 | 33.06 | Show/hide |
Query: KARRTRAAEKT-VTSVVPFKSGSSSRKKRSSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQ
+ RR A +KT +T V SS ++ R ++ V D +L+ E + LS+ I+ L+L+ + L +R G EP+ Q A + +++
Subjt: KARRTRAAEKT-VTSVVPFKSGSSSRKKRSSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQ
Query: RTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYR
L+ L L ++K+ SN+RLV+SIA+ Y G + DLVQ G GL+RG EKFD+SKGF+ STY +WWI+Q V + L D SRT+RLP H+ E
Subjt: RTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYR
Query: VKEARKQLLSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEV----ISDPEAET-----AEDMLIKQFMKQDLEKVLD-SLN
++ A K L E G P IAE+ +S K++ SL++ + N P E I+D E +D+ +K+++ K++ +L
Subjt: VKEARKQLLSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEV----ISDPEAET-----AEDMLIKQFMKQDLEKVLD-SLN
Query: PREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLM
REK++IR +G+ D T ++I + +G+SRER+RQ+ A KLK+ R + ++ ++
Subjt: PREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYLM
|
|
| AT2G36990.1 RNApolymerase sigma-subunit F | 1.2e-64 | 39.04 | Show/hide |
Query: VKSKRQTERKARRTRAAEKTVTSVVPFKSGSSSRKKRSSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQW
V+SKRQ ER+A+ RA + + +S KK+ Q D D L+ T +LLTA EE EL IQ LLKLE+++ +L + G EPT +W
Subjt: VKSKRQTERKARRTRAAEKTVTSVVPFKSGSSSRKKRSSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQW
Query: AAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPF
A A G++ L+ ++ G ++K+I +N+RLV+ IAK YQ G+N QDL+QEG GL++ EKF G +F+TYA+WWI+Q++RK + SRTIRLP
Subjt: AAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPF
Query: HMVEATYRVKEARKQLLSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPR
++ +V EARK + E P +E+A G+S ++L +L + P S++Q I +Q+ E+ D ET + KQ M+ + +L+ L+P+
Subjt: HMVEATYRVKEARKQLLSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPR
Query: EKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQY
E+++I+ RFG++ G+ ++L EIGEI G+S+ER+RQ+ES A +LK + L Y
Subjt: EKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQY
|
|
| AT3G53920.1 RNApolymerase sigma-subunit C | 9.2e-54 | 33.33 | Show/hide |
Query: SKELELLQDELSESITVKSKRQTERKARRTR-AAEKTVTSVVPFKSGSSSRKKRSSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERL
S EL+ ++ + V S+R+ ++KARR+ AE S +P R +++ P +Y + SR E E+S G++ + +ER+
Subjt: SKELELLQDELSESITVKSKRQTERKARRTR-AAEKTVTSVVPFKSGSSSRKKRSSLQEVDYSDPLRYLRATTSTSRLLTATEELELSEGIQDLLKLERL
Query: QEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQ
+ +L E G + + WAAAAG+N++ L + L+YG C+D+++KS LV+ +A+NY+G G+ +DL+Q G G+++GAE+FD ++G+KFSTY +WI++
Subjt: QEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQ
Query: AVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLSENG-RHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAEDMLI
++ +S +R + +P ++ +++ARK L + +G ++ D+EIA+ G S+K++ A K S+++K+G K E D E+ E+ ++
Subjt: AVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLSENG-RHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETAEDMLI
Query: KQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYL
+Q ++D+ +L+ L PREKQV+ R+G++D R K+L+EIG+++ VS+E IR+IE A KL+++ + L+ YL
Subjt: KQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYL
|
|
| AT5G13730.1 sigma factor 4 | 5.4e-46 | 35.97 | Show/hide |
Query: STSRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCR
S S L+ EE++L +++ KLE L + E NE A+ G +R+ + L ++K+ + RLV+SIA YQG G+NLQDL+QEG
Subjt: STSRLLTATEELELSEGIQDLLKLERLQEELAERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCR
Query: GLVRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQK
GL+RGAE+FD +G+K STY +WWIKQA+ + ++ +SR ++LP M E T +V EA L + R P +EIAE L++ + + ++P SL++
Subjt: GLVRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLSENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQK
Query: IGINQNLKPSEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQY
N + E++ P+ E+M+ ++ MK ++E++L SL RE +V+ FG+ + +EIG+ + +SRER+RQI A +KL+N L+ Y
Subjt: IGINQNLKPSEVISDPEAETAEDMLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQY
Query: LMS
S
Subjt: LMS
|
|
