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MELO3C022687 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C022687
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr04:19485402..19486413
RNA-Seq ExpressionMELO3C022687
SyntenyMELO3C022687
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051899.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]3.0e-2040.51Show/hide
Query:  NQPNQGQGRSENLFNNQHGGHCSRNQGRGRSWFRPICQVCTKIGHTANVCYNQFHKNFVSNLGSN-KRNSGNNPRYNNGKAQVALVTANSNNPFISISDN
        N   QG   + +  N  + G  SR +GR R  F P C+VC KIGHT ++CYN+F+K FV N G N  + + NN R NN K   A VT++  NPF    +N
Subjt:  NQPNQGQGRSENLFNNQHGGHCSRNQGRGRSWFRPICQVCTKIGHTANVCYNQFHKNFVSNLGSN-KRNSGNNPRYNNGKAQVALVTANSNNPFISISDN

Query:  GIDPNWYTDGGATNHVTSEYNNLMNLVEYEELVEGGFSKIGSKDSTVWRLKKIGNQKL
         +D NWY +  A NH+T++Y NL N VEY     GG  ++   +    ++  IGN  L
Subjt:  GIDPNWYTDGGATNHVTSEYNNLMNLVEYEELVEGGFSKIGSKDSTVWRLKKIGNQKL

KAA0053532.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]9.6e-91100Show/hide
Query:  MNQPNQGQGRSENLFNNQHGGHCSRNQGRGRSWFRPICQVCTKIGHTANVCYNQFHKNFVSNLGSNKRNSGNNPRYNNGKAQVALVTANSNNPFISISDN
        MNQPNQGQGRSENLFNNQHGGHCSRNQGRGRSWFRPICQVCTKIGHTANVCYNQFHKNFVSNLGSNKRNSGNNPRYNNGKAQVALVTANSNNPFISISDN
Subjt:  MNQPNQGQGRSENLFNNQHGGHCSRNQGRGRSWFRPICQVCTKIGHTANVCYNQFHKNFVSNLGSNKRNSGNNPRYNNGKAQVALVTANSNNPFISISDN

Query:  GIDPNWYTDGGATNHVTSEYNNLMNLVEYEELVEGGFSKIGSKDSTVWRLKKIGNQKLKLFLLTD
        GIDPNWYTDGGATNHVTSEYNNLMNLVEYEELVEGGFSKIGSKDSTVWRLKKIGNQKLKLFLLTD
Subjt:  GIDPNWYTDGGATNHVTSEYNNLMNLVEYEELVEGGFSKIGSKDSTVWRLKKIGNQKLKLFLLTD

TYJ99887.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]3.0e-2040.51Show/hide
Query:  NQPNQGQGRSENLFNNQHGGHCSRNQGRGRSWFRPICQVCTKIGHTANVCYNQFHKNFVSNLGSN-KRNSGNNPRYNNGKAQVALVTANSNNPFISISDN
        N   QG   + +  N  + G  SR +GR R  F P C+VC KIGHT ++CYN+F+K FV N G N  + + NN R NN K   A VT++  NPF    +N
Subjt:  NQPNQGQGRSENLFNNQHGGHCSRNQGRGRSWFRPICQVCTKIGHTANVCYNQFHKNFVSNLGSN-KRNSGNNPRYNNGKAQVALVTANSNNPFISISDN

Query:  GIDPNWYTDGGATNHVTSEYNNLMNLVEYEELVEGGFSKIGSKDSTVWRLKKIGNQKL
         +D NWY +  A NH+T++Y NL N VEY     GG  ++   +    ++  IGN  L
Subjt:  GIDPNWYTDGGATNHVTSEYNNLMNLVEYEELVEGGFSKIGSKDSTVWRLKKIGNQKL

XP_038905161.1 uncharacterized protein LOC120091275 isoform X1 [Benincasa hispida]2.7e-1641.98Show/hide
Query:  MNQPNQGQGRSENLFNNQH-GGHCSRNQGRGRSWFRPICQVCTKIGHTANVCYNQFHKNFVSNLGSNK-RNSGNNPRYNNGKAQVALVTANSNNPFISIS
        +NQ N+    ++++   Q  GG   R +GRGR+  +P+CQVC K+GH A  C+N++ ++FV N   NK     NN   N      AL  A  +NPF++  
Subjt:  MNQPNQGQGRSENLFNNQH-GGHCSRNQGRGRSWFRPICQVCTKIGHTANVCYNQFHKNFVSNLGSNK-RNSGNNPRYNNGKAQVALVTANSNNPFISIS

Query:  DNGIDPNWYTDGGATNHVTSEYNNLMNLVEY
        +N  D NWY D GA+NHVTS++NNL N +EY
Subjt:  DNGIDPNWYTDGGATNHVTSEYNNLMNLVEY

XP_038905164.1 uncharacterized protein LOC120091275 isoform X4 [Benincasa hispida]2.7e-1641.98Show/hide
Query:  MNQPNQGQGRSENLFNNQH-GGHCSRNQGRGRSWFRPICQVCTKIGHTANVCYNQFHKNFVSNLGSNK-RNSGNNPRYNNGKAQVALVTANSNNPFISIS
        +NQ N+    ++++   Q  GG   R +GRGR+  +P+CQVC K+GH A  C+N++ ++FV N   NK     NN   N      AL  A  +NPF++  
Subjt:  MNQPNQGQGRSENLFNNQH-GGHCSRNQGRGRSWFRPICQVCTKIGHTANVCYNQFHKNFVSNLGSNK-RNSGNNPRYNNGKAQVALVTANSNNPFISIS

Query:  DNGIDPNWYTDGGATNHVTSEYNNLMNLVEY
        +N  D NWY D GA+NHVTS++NNL N +EY
Subjt:  DNGIDPNWYTDGGATNHVTSEYNNLMNLVEY

TrEMBL top hitse value%identityAlignment
A0A5A7UCN8 Retrovirus-related Pol polyprotein from transposon TNT 1-944.6e-91100Show/hide
Query:  MNQPNQGQGRSENLFNNQHGGHCSRNQGRGRSWFRPICQVCTKIGHTANVCYNQFHKNFVSNLGSNKRNSGNNPRYNNGKAQVALVTANSNNPFISISDN
        MNQPNQGQGRSENLFNNQHGGHCSRNQGRGRSWFRPICQVCTKIGHTANVCYNQFHKNFVSNLGSNKRNSGNNPRYNNGKAQVALVTANSNNPFISISDN
Subjt:  MNQPNQGQGRSENLFNNQHGGHCSRNQGRGRSWFRPICQVCTKIGHTANVCYNQFHKNFVSNLGSNKRNSGNNPRYNNGKAQVALVTANSNNPFISISDN

Query:  GIDPNWYTDGGATNHVTSEYNNLMNLVEYEELVEGGFSKIGSKDSTVWRLKKIGNQKLKLFLLTD
        GIDPNWYTDGGATNHVTSEYNNLMNLVEYEELVEGGFSKIGSKDSTVWRLKKIGNQKLKLFLLTD
Subjt:  GIDPNWYTDGGATNHVTSEYNNLMNLVEYEELVEGGFSKIGSKDSTVWRLKKIGNQKLKLFLLTD

A0A5A7UEH3 Retrovirus-related Pol polyprotein from transposon TNT 1-941.5e-2040.51Show/hide
Query:  NQPNQGQGRSENLFNNQHGGHCSRNQGRGRSWFRPICQVCTKIGHTANVCYNQFHKNFVSNLGSN-KRNSGNNPRYNNGKAQVALVTANSNNPFISISDN
        N   QG   + +  N  + G  SR +GR R  F P C+VC KIGHT ++CYN+F+K FV N G N  + + NN R NN K   A VT++  NPF    +N
Subjt:  NQPNQGQGRSENLFNNQHGGHCSRNQGRGRSWFRPICQVCTKIGHTANVCYNQFHKNFVSNLGSN-KRNSGNNPRYNNGKAQVALVTANSNNPFISISDN

Query:  GIDPNWYTDGGATNHVTSEYNNLMNLVEYEELVEGGFSKIGSKDSTVWRLKKIGNQKL
         +D NWY +  A NH+T++Y NL N VEY     GG  ++   +    ++  IGN  L
Subjt:  GIDPNWYTDGGATNHVTSEYNNLMNLVEYEELVEGGFSKIGSKDSTVWRLKKIGNQKL

A0A5C7HR05 Uncharacterized protein8.6e-1341.27Show/hide
Query:  NNQHGGHC---SRNQGRGRSW-----FRPICQVCTKIGHTANVCYNQFHKNFVSNLGSNKRNSGNNPRYNN-GKAQVALVTANSNNPFISISDNGIDPNW
        N+Q GGH    +R +GRGR        RP+CQVC KIGHT NVCY+ F +++  N        GN     +  +     V +NS N     S +  DPNW
Subjt:  NNQHGGHC---SRNQGRGRSW-----FRPICQVCTKIGHTANVCYNQFHKNFVSNLGSNKRNSGNNPRYNN-GKAQVALVTANSNNPFISISDNGIDPNW

Query:  YTDGGATNHVTSEYNNLMNLVEYEEL
        Y D GATNH+T ++NNL    EY  L
Subjt:  YTDGGATNHVTSEYNNLMNLVEYEEL

A0A5D3BL83 Retrovirus-related Pol polyprotein from transposon TNT 1-941.5e-2040.51Show/hide
Query:  NQPNQGQGRSENLFNNQHGGHCSRNQGRGRSWFRPICQVCTKIGHTANVCYNQFHKNFVSNLGSN-KRNSGNNPRYNNGKAQVALVTANSNNPFISISDN
        N   QG   + +  N  + G  SR +GR R  F P C+VC KIGHT ++CYN+F+K FV N G N  + + NN R NN K   A VT++  NPF    +N
Subjt:  NQPNQGQGRSENLFNNQHGGHCSRNQGRGRSWFRPICQVCTKIGHTANVCYNQFHKNFVSNLGSN-KRNSGNNPRYNNGKAQVALVTANSNNPFISISDN

Query:  GIDPNWYTDGGATNHVTSEYNNLMNLVEYEELVEGGFSKIGSKDSTVWRLKKIGNQKL
         +D NWY +  A NH+T++Y NL N VEY     GG  ++   +    ++  IGN  L
Subjt:  GIDPNWYTDGGATNHVTSEYNNLMNLVEYEELVEGGFSKIGSKDSTVWRLKKIGNQKL

A0A5D3C373 Retrovirus-related Pol polyprotein from transposon TNT 1-943.5e-1439.35Show/hide
Query:  NQGQGRSENLFNNQHGG-HCSRNQGRGRSWFRPICQVCTKIGHTANVCYNQFHKNFVSNLGSNKRNSGNNPRYNNGKAQVALVTANSNNPFISISDNGID
        +Q  G + N    Q GG +  R +G+GR   +P CQVC K GH+A VCYN+F+K F+S L  ++    +N  ++       LVT  S N F + +D  I+
Subjt:  NQGQGRSENLFNNQHGG-HCSRNQGRGRSWFRPICQVCTKIGHTANVCYNQFHKNFVSNLGSNKRNSGNNPRYNNGKAQVALVTANSNNPFISISDNGID

Query:  PNWYTDGGATNHVTSEYNNLMNLVEYEELVEGGFSKIGSKDSTVWRLKKIGNQKL
         NWY D GATNH+T EY+NL N  EY      G  KI   +     +  IGN  L
Subjt:  PNWYTDGGATNHVTSEYNNLMNLVEYEELVEGGFSKIGSKDSTVWRLKKIGNQKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCAACCAAATCAGGGACAAGGTCGTAGTGAAAATTTATTTAACAACCAACATGGTGGTCACTGCTCAAGAAATCAAGGAAGAGGCAGAAGTTGGTTTAGGCCCAT
TTGTCAAGTTTGCACAAAAATTGGTCACACTGCAAATGTCTGCTACAATCAGTTCCATAAGAATTTTGTTTCTAACTTGGGCTCTAATAAAAGAAATAGTGGAAACAATC
CTCGCTACAACAATGGCAAAGCTCAAGTAGCCTTGGTGACAGCCAACAGTAACAATCCATTTATTTCTATTAGTGACAATGGCATTGATCCAAACTGGTATACGGACGGC
GGAGCAACCAACCATGTGACATCCGAGTACAATAATCTCATGAATCTTGTTGAATACGAAGAGCTTGTTGAAGGAGGGTTTAGCAAGATTGGAAGCAAAGATTCGACAGT
TTGGAGGTTGAAGAAGATAGGAAACCAAAAGCTCAAGTTATTTCTCTTGACAGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACCAACCAAATCAGGGACAAGGTCGTAGTGAAAATTTATTTAACAACCAACATGGTGGTCACTGCTCAAGAAATCAAGGAAGAGGCAGAAGTTGGTTTAGGCCCAT
TTGTCAAGTTTGCACAAAAATTGGTCACACTGCAAATGTCTGCTACAATCAGTTCCATAAGAATTTTGTTTCTAACTTGGGCTCTAATAAAAGAAATAGTGGAAACAATC
CTCGCTACAACAATGGCAAAGCTCAAGTAGCCTTGGTGACAGCCAACAGTAACAATCCATTTATTTCTATTAGTGACAATGGCATTGATCCAAACTGGTATACGGACGGC
GGAGCAACCAACCATGTGACATCCGAGTACAATAATCTCATGAATCTTGTTGAATACGAAGAGCTTGTTGAAGGAGGGTTTAGCAAGATTGGAAGCAAAGATTCGACAGT
TTGGAGGTTGAAGAAGATAGGAAACCAAAAGCTCAAGTTATTTCTCTTGACAGATTGA
Protein sequenceShow/hide protein sequence
MNQPNQGQGRSENLFNNQHGGHCSRNQGRGRSWFRPICQVCTKIGHTANVCYNQFHKNFVSNLGSNKRNSGNNPRYNNGKAQVALVTANSNNPFISISDNGIDPNWYTDG
GATNHVTSEYNNLMNLVEYEELVEGGFSKIGSKDSTVWRLKKIGNQKLKLFLLTD