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MELO3C022732 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C022732
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionLPS-induced tumor necrosis factor alpha factor
Genome locationchr04:20397325..20397474
RNA-Seq ExpressionMELO3C022732
SyntenyMELO3C022732
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054811.1 hypothetical protein E6C27_scaffold437G00990 [Cucumis melo var. makuwa]1.5e-0783.33Show/hide
Query:  MAADCAPVVATGASVVMTVAPMLTPVVAPVMAAATVATSITGVMGILG
        MA DCA  VA GASVVMTVAPMLTPVVAPVMA+ TVATS+TGVM ILG
Subjt:  MAADCAPVVATGASVVMTVAPMLTPVVAPVMAAATVATSITGVMGILG

KAA0068093.1 LPS-induced tumor necrosis factor alpha factor [Cucumis melo var. makuwa]1.7e-11100Show/hide
Query:  ADCAPVVATGASVVMTVAPMLTPVVAPVMAAATVATSITGVMGILGI
        ADCAPVVATGASVVMTVAPMLTPVVAPVMAAATVATSITGVMGILGI
Subjt:  ADCAPVVATGASVVMTVAPMLTPVVAPVMAAATVATSITGVMGILGI

KGN65426.1 hypothetical protein Csa_019847 [Cucumis sativus]2.8e-0673.47Show/hide
Query:  MAADCAPVVATGASVVMTVAPMLTPVVAPVMAAATVATSITGVMGILGI
        +AADCAP VAT ++VVMTVAP L PVVAPVM AATV TS+TGV+ I GI
Subjt:  MAADCAPVVATGASVVMTVAPMLTPVVAPVMAAATVATSITGVMGILGI

TYJ99647.1 hypothetical protein E5676_scaffold562G00240 [Cucumis melo var. makuwa]6.7e-0885.42Show/hide
Query:  MAADCAPVVATGASVVMTVAPMLTPVVAPVMAAATVATSITGVMGILG
        MA DCA  VA GASVVMTVAPMLTPVVAPVMAA TVATS+TGVM ILG
Subjt:  MAADCAPVVATGASVVMTVAPMLTPVVAPVMAAATVATSITGVMGILG

TYK09492.1 hypothetical protein E5676_scaffold499G00920 [Cucumis melo var. makuwa]1.5e-0779.59Show/hide
Query:  MAADCAPVVATGASVVMTVAPMLTPVVAPVMAAATVATSITGVMGILGI
        MAADCAP VATGASVVMTVAPMLTPVVAPVM AA V TS+T V+ +LG+
Subjt:  MAADCAPVVATGASVVMTVAPMLTPVVAPVMAAATVATSITGVMGILGI

TrEMBL top hitse value%identityAlignment
A0A0A0LZP7 Uncharacterized protein1.4e-0673.47Show/hide
Query:  MAADCAPVVATGASVVMTVAPMLTPVVAPVMAAATVATSITGVMGILGI
        +AADCAP VAT ++VVMTVAP L PVVAPVM AATV TS+TGV+ I GI
Subjt:  MAADCAPVVATGASVVMTVAPMLTPVVAPVMAAATVATSITGVMGILGI

A0A5A7UMM6 Uncharacterized protein7.2e-0883.33Show/hide
Query:  MAADCAPVVATGASVVMTVAPMLTPVVAPVMAAATVATSITGVMGILG
        MA DCA  VA GASVVMTVAPMLTPVVAPVMA+ TVATS+TGVM ILG
Subjt:  MAADCAPVVATGASVVMTVAPMLTPVVAPVMAAATVATSITGVMGILG

A0A5D3BKI7 Uncharacterized protein3.2e-0885.42Show/hide
Query:  MAADCAPVVATGASVVMTVAPMLTPVVAPVMAAATVATSITGVMGILG
        MA DCA  VA GASVVMTVAPMLTPVVAPVMAA TVATS+TGVM ILG
Subjt:  MAADCAPVVATGASVVMTVAPMLTPVVAPVMAAATVATSITGVMGILG

A0A5D3CE01 Uncharacterized protein7.2e-0879.59Show/hide
Query:  MAADCAPVVATGASVVMTVAPMLTPVVAPVMAAATVATSITGVMGILGI
        MAADCAP VATGASVVMTVAPMLTPVVAPVM AA V TS+T V+ +LG+
Subjt:  MAADCAPVVATGASVVMTVAPMLTPVVAPVMAAATVATSITGVMGILGI

A0A5D3DRF6 LPS-induced tumor necrosis factor alpha factor8.2e-12100Show/hide
Query:  ADCAPVVATGASVVMTVAPMLTPVVAPVMAAATVATSITGVMGILGI
        ADCAPVVATGASVVMTVAPMLTPVVAPVMAAATVATSITGVMGILGI
Subjt:  ADCAPVVATGASVVMTVAPMLTPVVAPVMAAATVATSITGVMGILGI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCTGACTGTGCTCCGGTAGTGGCAACGGGTGCATCGGTGGTTATGACGGTGGCACCAATGTTGACCCCGGTTGTTGCTCCTGTCATGGCTGCAGCCACTGTTGC
TACATCGATCACTGGTGTTATGGGGATTTTAGGAATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCTGACTGTGCTCCGGTAGTGGCAACGGGTGCATCGGTGGTTATGACGGTGGCACCAATGTTGACCCCGGTTGTTGCTCCTGTCATGGCTGCAGCCACTGTTGC
TACATCGATCACTGGTGTTATGGGGATTTTAGGAATTTGA
Protein sequenceShow/hide protein sequence
MAADCAPVVATGASVVMTVAPMLTPVVAPVMAAATVATSITGVMGILGI