CuGenDBv2

Gene ID	MELO3C023070
Organism	Cucumis melo DHL92 (Melon (DHL92) v4)
Description	small acidic protein 1
Genome location	chr05:6855292..6855958
RNA-Seq Expression	MELO3C023070
Synteny	MELO3C023070
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6593800.1 Small acidic protein 2, partial [Cucurbita argyrosperma subsp. sororia]

9.3e-23

93.55

Show/hide

Query:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN
        MR +PMEFFAE+EEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD+N
Subjt:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN

XP_004147176.1 small acidic protein 1 [Cucumis sativus]

6.5e-24

98.39

Show/hide

Query:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN
        MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD+N
Subjt:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN

XP_008460713.1 PREDICTED: small acidic protein 1 [Cucumis melo]

4.9e-24

100

Show/hide

Query:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN
        MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN
Subjt:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN

XP_022964281.1 small acidic protein 1 [Cucurbita moschata]

9.3e-23

93.55

Show/hide

Query:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN
        MR +PMEFFAE+EEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD+N
Subjt:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN

XP_038875245.1 small acidic protein 1 [Benincasa hispida]

5.5e-23

95.16

Show/hide

Query:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN
        MR +PMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD+N
Subjt:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LNK1 Uncharacterized protein

3.1e-24

98.39

Show/hide

Query:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN
        MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD+N
Subjt:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN

A0A1S3CCM1 small acidic protein 1

2.4e-24

100

Show/hide

Query:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN
        MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN
Subjt:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN

A0A5A7SMJ5 Small acidic protein 1

2.4e-24

100

Show/hide

Query:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN
        MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN
Subjt:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN

A0A6J1HIH2 small acidic protein 1

4.5e-23

93.55

Show/hide

Query:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN
        MR +PMEFFAE+EEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD+N
Subjt:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN

A0A6J1KE12 small acidic protein 1

4.5e-23

93.55

Show/hide

Query:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN
        MR +PMEFFAE+EEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSD+N
Subjt:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN

SwissProt top hits

e value

%identity

Alignment

Q1ECS0 Small acidic protein 2

2.0e-04

43.55

Show/hide

Query:  EFFAELEEQGSTVAM----DVDDVDPLEILGE--GVISAENKLADADFFNSFEDDFDDSDVN
        +F  E+E  G ++ M    D DD  P+++  E  G+   + K  D+DFFN FEDDFDDSD+N
Subjt:  EFFAELEEQGSTVAM----DVDDVDPLEILGE--GVISAENKLADADFFNSFEDDFDDSDVN

Q9T0H2 Small acidic protein 1

1.4e-13

54.84

Show/hide

Query:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN
        MR   ++  +E+++ GS++AMDVDD++ +EIL EG + ++NKLADADFFN F+DDFDD+D+N
Subjt:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN

Arabidopsis top hits

e value

%identity

Alignment

AT3G24280.1 small acidic protein 2

1.4e-05

43.55

Show/hide

Query:  EFFAELEEQGSTVAM----DVDDVDPLEILGE--GVISAENKLADADFFNSFEDDFDDSDVN
        +F  E+E  G ++ M    D DD  P+++  E  G+   + K  D+DFFN FEDDFDDSD+N
Subjt:  EFFAELEEQGSTVAM----DVDDVDPLEILGE--GVISAENKLADADFFNSFEDDFDDSDVN

AT4G13520.1 small acidic protein 1

1.0e-14

54.84

Show/hide

Query:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN
        MR   ++  +E+++ GS++AMDVDD++ +EIL EG + ++NKLADADFFN F+DDFDD+D+N
Subjt:  MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAGATCTTCACCGATGGAGTTCTTTGCGGAGCTGGAAGAACAGGGATCCACGGTCGCCATGGACGTCGACGATGTAGACCCACTTGAGATATTGGGCGAGGGT
GTGATCTCCGCCGAGAACAAGCTCGCCGACGCCGATTTCTTCAACTCCTTCGAGGATGATTTTGATGACTCTGACGTCAACTGA

mRNA sequence

Show/hide mRNA sequence

GAAATGAGTCATTATAGAACTTGTTTTAATATTTAGGTTACTTTATCAAGGTTTCTTCTCAAATTCCCATTCGGCCAAGTTACAAATTCAAACAAGTCTATTTGG
TTTCCATTGTTCATTTGGTTGCCACGGAGATGAGATCTTCACCGATGGAGTTCTTTGCGGAGCTGGAAGAACAGGGATCCACGGTCGCCATGGACGTCGACGATG
TAGACCCACTTGAGATATTGGGCGAGGGTGTGATCTCCGCCGAGAACAAGCTCGCCGACGCCGATTTCTTCAACTCCTTCGAGGATGATTTTGATGACTCTGACG
TCAACTGAGATTCTTTTTCGTGGTTTCCTTCAAAACAAGTAGTTAATTTCCCAATTCTATGTTCTTACTTCTCTTGATCAAACAAAGTTGATAGATCCTACCATG
CCCTAGTTTGTTTCAGTCTTTAGGGATTTCACTGGTTTGCTTGGTGATAAGTTGAATACTTTTAACATGTTTTACTTTCTGAATTACTTGATTGGTTATCCCATA
GTTTCTTTTCTCTCAAGCGTGGTGGTTAGCCTTGTAATTGTCATTAGTTGCAACGAAAAAGGGGAATGTGTTTATATATAACAGAAAATGTGAGAAACTGTGTAC
TTTGTTGCCACATAATTTTAGAGTGATTTTGAAATAG

Protein sequence

Show/hide protein sequence

MRSSPMEFFAELEEQGSTVAMDVDDVDPLEILGEGVISAENKLADADFFNSFEDDFDDSDVN

MELO3C023070 (gene) of Melon (DHL92) v4 genome