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MELO3C023780 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C023780
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionRetrotransposon protein
Genome locationchr06:18022006..18022200
RNA-Seq ExpressionMELO3C023780
SyntenyMELO3C023780
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033883.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]5.0e-1158.73Show/hide
Query:  MGLESIEVDDVEEMVTIFLQVLAHNAKNYEIQKEFVWSGEIISLNFNIVLMVVLHLHDELLAK
        +G+ SIE+ DVEEMV +FL +LAH+ KN+ IQ+EF+ SGE +S +FN+VL+ V+ LHDELL K
Subjt:  MGLESIEVDDVEEMVTIFLQVLAHNAKNYEIQKEFVWSGEIISLNFNIVLMVVLHLHDELLAK

KAA0034865.1 retrotransposon protein [Cucumis melo var. makuwa]3.8e-1163.93Show/hide
Query:  GLESIEVDDVEEMVTIFLQVLAHNAKNYEIQKEFVWSGEIISLNFNIVLMVVLHLHDELLA
        GLESIE  D+EEM+ +FL VLAH+ KN  IQ+EFV SG+ +S +FN+VLM +L LHDELLA
Subjt:  GLESIEVDDVEEMVTIFLQVLAHNAKNYEIQKEFVWSGEIISLNFNIVLMVVLHLHDELLA

KAA0065478.1 retrotransposon protein [Cucumis melo var. makuwa]3.8e-1161.29Show/hide
Query:  GLESIEVDDVEEMVTIFLQVLAHNAKNYEIQKEFVWSGEIISLNFNIVLMVVLHLHDELLAK
        GL S E+ DVEEMV +FL VLAH+ KN  IQ+EFVWSGE +S +FNIVL+ VL L++EL+ +
Subjt:  GLESIEVDDVEEMVTIFLQVLAHNAKNYEIQKEFVWSGEIISLNFNIVLMVVLHLHDELLAK

TYK09362.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.1e-1061.29Show/hide
Query:  GLESIEVDDVEEMVTIFLQVLAHNAKNYEIQKEFVWSGEIISLNFNIVLMVVLHLHDELLAK
        GL S EV DVEEMV +FL +LAHN KN  IQ+EF+WS E I  +FN+VL+ V+ LH+ELL K
Subjt:  GLESIEVDDVEEMVTIFLQVLAHNAKNYEIQKEFVWSGEIISLNFNIVLMVVLHLHDELLAK

TYK24224.1 retrotransposon protein [Cucumis melo var. makuwa]8.4e-1159.68Show/hide
Query:  GLESIEVDDVEEMVTIFLQVLAHNAKNYEIQKEFVWSGEIISLNFNIVLMVVLHLHDELLAK
        GL SIE+ DVEEMV +FL VLAH+ KN+ IQ+EFVWSGE +S +F IVL+ V+ L++EL+ +
Subjt:  GLESIEVDDVEEMVTIFLQVLAHNAKNYEIQKEFVWSGEIISLNFNIVLMVVLHLHDELLAK

TrEMBL top hitse value%identityAlignment
A0A5A7SXL1 Retrotransposon protein5.3e-1161.29Show/hide
Query:  GLESIEVDDVEEMVTIFLQVLAHNAKNYEIQKEFVWSGEIISLNFNIVLMVVLHLHDELLAK
        GL S EV DVEEMV +FL +LAHN KN  IQ+EF+WS E I  +FN+VL+ V+ LH+ELL K
Subjt:  GLESIEVDDVEEMVTIFLQVLAHNAKNYEIQKEFVWSGEIISLNFNIVLMVVLHLHDELLAK

A0A5A7T069 Retrotransposon protein1.8e-1163.93Show/hide
Query:  GLESIEVDDVEEMVTIFLQVLAHNAKNYEIQKEFVWSGEIISLNFNIVLMVVLHLHDELLA
        GLESIE  D+EEM+ +FL VLAH+ KN  IQ+EFV SG+ +S +FN+VLM +L LHDELLA
Subjt:  GLESIEVDDVEEMVTIFLQVLAHNAKNYEIQKEFVWSGEIISLNFNIVLMVVLHLHDELLA

A0A5A7VCW6 Retrotransposon protein1.8e-1161.29Show/hide
Query:  GLESIEVDDVEEMVTIFLQVLAHNAKNYEIQKEFVWSGEIISLNFNIVLMVVLHLHDELLAK
        GL S E+ DVEEMV +FL VLAH+ KN  IQ+EFVWSGE +S +FNIVL+ VL L++EL+ +
Subjt:  GLESIEVDDVEEMVTIFLQVLAHNAKNYEIQKEFVWSGEIISLNFNIVLMVVLHLHDELLAK

A0A5D3BPM2 Putative nuclease HARBI12.4e-1158.73Show/hide
Query:  MGLESIEVDDVEEMVTIFLQVLAHNAKNYEIQKEFVWSGEIISLNFNIVLMVVLHLHDELLAK
        +G+ SIE+ DVEEMV +FL +LAH+ KN+ IQ+EF+ SGE +S +FN+VL+ V+ LHDELL K
Subjt:  MGLESIEVDDVEEMVTIFLQVLAHNAKNYEIQKEFVWSGEIISLNFNIVLMVVLHLHDELLAK

A0A5D3DKU8 Retrotransposon protein4.1e-1159.68Show/hide
Query:  GLESIEVDDVEEMVTIFLQVLAHNAKNYEIQKEFVWSGEIISLNFNIVLMVVLHLHDELLAK
        GL SIE+ DVEEMV +FL VLAH+ KN+ IQ+EFVWSGE +S +F IVL+ V+ L++EL+ +
Subjt:  GLESIEVDDVEEMVTIFLQVLAHNAKNYEIQKEFVWSGEIISLNFNIVLMVVLHLHDELLAK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTTAGAATCGATAGAAGTCGATGACGTTGAGGAGATGGTCACTATCTTCCTTCAGGTGCTGGCGCACAATGCGAAGAACTACGAGATTCAAAAGGAATTTGTATG
GTCTGGTGAGATAATCTCGCTGAATTTCAACATTGTTTTGATGGTTGTGCTTCATCTACATGATGAGTTATTAGCAAAACTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCTTAGAATCGATAGAAGTCGATGACGTTGAGGAGATGGTCACTATCTTCCTTCAGGTGCTGGCGCACAATGCGAAGAACTACGAGATTCAAAAGGAATTTGTATG
GTCTGGTGAGATAATCTCGCTGAATTTCAACATTGTTTTGATGGTTGTGCTTCATCTACATGATGAGTTATTAGCAAAACTATAG
Protein sequenceShow/hide protein sequence
MGLESIEVDDVEEMVTIFLQVLAHNAKNYEIQKEFVWSGEIISLNFNIVLMVVLHLHDELLAKL