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MELO3C024073 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C024073
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionRetrotransposon gag protein
Genome locationchr01:8247914..8248129
RNA-Seq ExpressionMELO3C024073
SyntenyMELO3C024073
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047407.1 retrotransposon gag protein [Cucumis melo var. makuwa]4.1e-0659.18Show/hide
Query:  DRNIIEAAAGGALEDKTPTVARDLIFFMVEHSKSYESRPTELDNETSKE
        DRN ++A AGGAL DK PT AR+LI  M E+S+S+E+R +ELDN  +KE
Subjt:  DRNIIEAAAGGALEDKTPTVARDLIFFMVEHSKSYESRPTELDNETSKE
KAA0058150.1 uncharacterized protein E6C27_scaffold274G004630 [Cucumis melo var. makuwa]2.4e-0660Show/hide
Query:  FDRNIIEAAAGGALEDKTPTVARDLIFFMVEHSKSYESRPTELDNETSKE
        FDRN ++AA GGAL DKTPT AR LI  M+E+S+S+ +R +ELDN  +KE
Subjt:  FDRNIIEAAAGGALEDKTPTVARDLIFFMVEHSKSYESRPTELDNETSKE
KAA0059539.1 Retroviral aspartyl protease [Cucumis melo var. makuwa]1.9e-1192.86Show/hide
Query:  NIIEAAAGGALEDKTPTVARDLIFFMVEHSKSYESRPTELDN
        N IEAAAGGALEDKTPTVARDLIFFMVEH KS ESRPTELDN
Subjt:  NIIEAAAGGALEDKTPTVARDLIFFMVEHSKSYESRPTELDN
KAA0061138.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.1e-0662Show/hide
Query:  FDRNIIEAAAGGALEDKTPTVARDLIFFMVEHSKSYESRPTELDNETSKE
        FDRN I+  AGGAL DKTPT AR+LI  MVE+S+S+ +R +ELDN  +KE
Subjt:  FDRNIIEAAAGGALEDKTPTVARDLIFFMVEHSKSYESRPTELDNETSKE
TYK09438.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.2e-0562.5Show/hide
Query:  RNIIEAAAGGALEDKTPTVARDLIFFMVEHSKSYESRPTELDNETSKE
        RN I+ AAGGAL DKTPT AR+LI  MVE+S+S+ +R +ELDN  +KE
Subjt:  RNIIEAAAGGALEDKTPTVARDLIFFMVEHSKSYESRPTELDNETSKE
TrEMBL top hitse value%identityAlignment
A0A5A7USL5 Retrotrans_gag domain-containing protein1.2e-0660Show/hide
Query:  FDRNIIEAAAGGALEDKTPTVARDLIFFMVEHSKSYESRPTELDNETSKE
        FDRN ++AA GGAL DKTPT AR LI  M+E+S+S+ +R +ELDN  +KE
Subjt:  FDRNIIEAAAGGALEDKTPTVARDLIFFMVEHSKSYESRPTELDNETSKE
A0A5A7V0Q7 Retrotransposon gag protein5.3e-0762Show/hide
Query:  FDRNIIEAAAGGALEDKTPTVARDLIFFMVEHSKSYESRPTELDNETSKE
        FDRN I+  AGGAL DKTPT AR+LI  MVE+S+S+ +R +ELDN  +KE
Subjt:  FDRNIIEAAAGGALEDKTPTVARDLIFFMVEHSKSYESRPTELDNETSKE
A0A5A7V187 Retroviral aspartyl protease9.3e-1292.86Show/hide
Query:  NIIEAAAGGALEDKTPTVARDLIFFMVEHSKSYESRPTELDN
        N IEAAAGGALEDKTPTVARDLIFFMVEH KS ESRPTELDN
Subjt:  NIIEAAAGGALEDKTPTVARDLIFFMVEHSKSYESRPTELDN
A0A5D3CDZ4 Retrotransposon gag protein5.8e-0662.5Show/hide
Query:  RNIIEAAAGGALEDKTPTVARDLIFFMVEHSKSYESRPTELDNETSKE
        RN I+ AAGGAL DKTPT AR+LI  MVE+S+S+ +R +ELDN  +KE
Subjt:  RNIIEAAAGGALEDKTPTVARDLIFFMVEHSKSYESRPTELDNETSKE
A0A5D3CRR8 Retrotransposon gag protein2.0e-0659.18Show/hide
Query:  DRNIIEAAAGGALEDKTPTVARDLIFFMVEHSKSYESRPTELDNETSKE
        DRN ++A AGGAL DK PT AR+LI  M E+S+S+E+R +ELDN  +KE
Subjt:  DRNIIEAAAGGALEDKTPTVARDLIFFMVEHSKSYESRPTELDNETSKE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCATTTTTTGTAATTTTTTCAAGAGGCATGCCTTCCCCAACATCGTGGAGTGTTGCAGTATTTTTGATAGGAACATAATTGAAGCGGCAGCGGGTGGAGCCTTGGA
GGATAAAACACCCACAGTGGCTCGAGACTTAATCTTCTTCATGGTTGAACACTCTAAAAGTTATGAGAGTAGACCCACCGAGCTTGACAATGAAACATCCAAAGAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCATTTTTTGTAATTTTTTCAAGAGGCATGCCTTCCCCAACATCGTGGAGTGTTGCAGTATTTTTGATAGGAACATAATTGAAGCGGCAGCGGGTGGAGCCTTGGA
GGATAAAACACCCACAGTGGCTCGAGACTTAATCTTCTTCATGGTTGAACACTCTAAAAGTTATGAGAGTAGACCCACCGAGCTTGACAATGAAACATCCAAAGAG
Protein sequenceShow/hide protein sequence
MGIFCNFFKRHAFPNIVECCSIFDRNIIEAAAGGALEDKTPTVARDLIFFMVEHSKSYESRPTELDNETSKE