| GenBank top hits | e value | %identity | Alignment |
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| KAA0046492.1 putative U6 snRNA-associated Sm-like protein LSm4 [Cucumis melo var. makuwa] | 9.0e-61 | 78.4 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEFYIRGNTIKYLRVPDEGSLIKLKLVVFGEIWGERGEVEDEAR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPE YIRGNTIKYLRVPD EV D+ +
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEFYIRGNTIKYLRVPDEGSLIKLKLVVFGEIWGERGEVEDEAR
Query: ASWRATRNRKPLGVGRGRGRGREDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIR
++ +RKPLGVGRGRGRGREDGPGGR AKGMGRGFDDGAKAASGGRGKGGPGGKPGA R
Subjt: ASWRATRNRKPLGVGRGRGRGREDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIR
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| KAG6592199.1 hypothetical protein SDJN03_14545, partial [Cucurbita argyrosperma subsp. sororia] | 9.0e-61 | 75 | Show/hide |
Query: SSSVCFVSLKMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEFYIRGNTIKYLRVPDEGSLIKLKLVVFGEIWG
+S CFVSLKMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPE YIRGNTIKYLRVPD
Subjt: SSSVCFVSLKMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEFYIRGNTIKYLRVPDEGSLIKLKLVVFGEIWG
Query: ERGEVEDEARASWRATRNRKPLGVGRGRGRGREDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIR
EV D+ + ++ +RKP GVGRGRGRGREDGPGGR +KGMGRGFDDGAKAASGGRGKG GGK GA R
Subjt: ERGEVEDEARASWRATRNRKPLGVGRGRGRGREDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIR
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| XP_008454536.1 PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4 [Cucumis melo] | 9.0e-61 | 78.4 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEFYIRGNTIKYLRVPDEGSLIKLKLVVFGEIWGERGEVEDEAR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPE YIRGNTIKYLRVPD EV D+ +
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEFYIRGNTIKYLRVPDEGSLIKLKLVVFGEIWGERGEVEDEAR
Query: ASWRATRNRKPLGVGRGRGRGREDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIR
++ +RKPLGVGRGRGRGREDGPGGR AKGMGRGFDDGAKAASGGRGKGGPGGKPGA R
Subjt: ASWRATRNRKPLGVGRGRGRGREDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIR
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| XP_008461936.1 PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4 [Cucumis melo] | 4.3e-63 | 80.25 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEFYIRGNTIKYLRVPDEGSLIKLKLVVFGEIWGERGEVEDEAR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEFYIRGNTIKYLRVPD EV D+ +
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEFYIRGNTIKYLRVPDEGSLIKLKLVVFGEIWGERGEVEDEAR
Query: ASWRATRNRKPLGVGRGRGRGREDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIR
++ +RKPLGVGRGRGRGREDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIR
Subjt: ASWRATRNRKPLGVGRGRGRGREDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIR
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| XP_038896461.1 uncharacterized protein LOC120084721 [Benincasa hispida] | 2.3e-64 | 77.91 | Show/hide |
Query: SSSVCFVSLKMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEFYIRGNTIKYLRVPDEGSLIKLKLVVFGEIWG
+SSVCFVSLKMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPE YIRGNTIKYLRVPD
Subjt: SSSVCFVSLKMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEFYIRGNTIKYLRVPDEGSLIKLKLVVFGEIWG
Query: ERGEVEDEARASWRATRNRKPLGVGRGRGRGREDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIR
EV D+ + ++ +RKP GVGRGRGRGREDGPGGR AKGMGRGFDD AKAASGGRGKGGPGGKPGA R
Subjt: ERGEVEDEARASWRATRNRKPLGVGRGRGRGREDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIR
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A0A0L3Q6 U6 snRNA-associated Sm-like protein LSm4 | 5.0e-65 | 77.91 | Show/hide |
Query: SSSVCFVSLKMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEFYIRGNTIKYLRVPDEGSLIKLKLVVFGEIWG
+SSVCF+SLKMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPE YIRGNTIKYLRVPD
Subjt: SSSVCFVSLKMLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEFYIRGNTIKYLRVPDEGSLIKLKLVVFGEIWG
Query: ERGEVEDEARASWRATRNRKPLGVGRGRGRGREDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIR
EV D+ + ++ +RKPLGVGRGRGRGREDGPG R AKGMGRGFDDGAKAASGGRGKGGPGGKPGA R
Subjt: ERGEVEDEARASWRATRNRKPLGVGRGRGRGREDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIR
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| A0A1S3BYD6 U6 snRNA-associated Sm-like protein LSm4 | 4.3e-61 | 78.4 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEFYIRGNTIKYLRVPDEGSLIKLKLVVFGEIWGERGEVEDEAR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPE YIRGNTIKYLRVPD EV D+ +
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEFYIRGNTIKYLRVPDEGSLIKLKLVVFGEIWGERGEVEDEAR
Query: ASWRATRNRKPLGVGRGRGRGREDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIR
++ +RKPLGVGRGRGRGREDGPGGR AKGMGRGFDDGAKAASGGRGKGGPGGKPGA R
Subjt: ASWRATRNRKPLGVGRGRGRGREDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIR
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| A0A1S3CFQ0 U6 snRNA-associated Sm-like protein LSm4 | 2.1e-63 | 80.25 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEFYIRGNTIKYLRVPDEGSLIKLKLVVFGEIWGERGEVEDEAR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEFYIRGNTIKYLRVPD EV D+ +
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEFYIRGNTIKYLRVPDEGSLIKLKLVVFGEIWGERGEVEDEAR
Query: ASWRATRNRKPLGVGRGRGRGREDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIR
++ +RKPLGVGRGRGRGREDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIR
Subjt: ASWRATRNRKPLGVGRGRGRGREDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIR
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| A0A5D3BGF1 U6 snRNA-associated Sm-like protein LSm4 | 4.3e-61 | 78.4 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEFYIRGNTIKYLRVPDEGSLIKLKLVVFGEIWGERGEVEDEAR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPE YIRGNTIKYLRVPD EV D+ +
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEFYIRGNTIKYLRVPDEGSLIKLKLVVFGEIWGERGEVEDEAR
Query: ASWRATRNRKPLGVGRGRGRGREDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIR
++ +RKPLGVGRGRGRGREDGPGGR AKGMGRGFDDGAKAASGGRGKGGPGGKPGA R
Subjt: ASWRATRNRKPLGVGRGRGRGREDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIR
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| A0A6J1CRC5 U6 snRNA-associated Sm-like protein LSm4 | 2.8e-60 | 76.54 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEFYIRGNTIKYLRVPDEGSLIKLKLVVFGEIWGERGEVEDEAR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPE YIRGNTIKYLRVPD EV D+ +
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEFYIRGNTIKYLRVPDEGSLIKLKLVVFGEIWGERGEVEDEAR
Query: ASWRATRNRKPLGVGRGRGRGREDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIR
++ +RKPLG+GRGRGRGREDGPGGR AKGMGRGFDDG+KA+SGGRGKGGPGGKPGA R
Subjt: ASWRATRNRKPLGVGRGRGRGREDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPGAIR
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| F4K4E3 Sm-like protein LSM4 | 1.8e-43 | 65.13 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEFYIRGNTIKYLRVPDEGSLIKLKLVVFGEIWGERGEVEDEAR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPE YIRGNTIKYLRVPDE V+ +V++E
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEFYIRGNTIKYLRVPDEGSLIKLKLVVFGEIWGERGEVEDEAR
Query: ASWRATRNRKPLGVGRGRGRGREDGPGGRSAKGMGRGFDDGAKAASGGRGKG
+ +RKP GVGRGRGRG +DG A+G GRG G + G G+G
Subjt: ASWRATRNRKPLGVGRGRGRGREDGPGGRSAKGMGRGFDDGAKAASGGRGKG
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| Q3ZBK6 U6 snRNA-associated Sm-like protein LSm4 | 1.5e-34 | 55.33 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEFYIRGNTIKYLRVPDE-GSLIKLKLVVFGEIWGERGEVEDEA
MLPLSLLKTAQ HPMLVELKNGETYNGHLV+CD WMNI+LREVICTS+DGD+FWRMPE YIRG+TIKYLR+PDE ++K ++V G
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEFYIRGNTIKYLRVPDE-GSLIKLKLVVFGEIWGERGEVEDEA
Query: RASWRATRNRKPLGVGRGRGRGREDGPGGRSAKGMGRGFDDGAKAASGGR
R + + +K G+G G GRG G G G GRG + G+
Subjt: RASWRATRNRKPLGVGRGRGRGREDGPGGRSAKGMGRGFDDGAKAASGGR
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| Q43582 Probable U6 snRNA-associated Sm-like protein LSm4 | 2.6e-47 | 65.62 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEFYIRGNTIKYLRVPDEGSLIKLKLVVFGEIWGERGEVEDEAR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPE Y+RGNTIKYLRVPD EV D+ +
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEFYIRGNTIKYLRVPDEGSLIKLKLVVFGEIWGERGEVEDEAR
Query: ASWRATRNRKPLGVGRGRGR-GREDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPG
++ +RKP GVGR R R GR+D GR KG+GRG DDG + GRGKGGP K G
Subjt: ASWRATRNRKPLGVGRGRGR-GREDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPG
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| Q9LGE6 Probable U6 snRNA-associated Sm-like protein LSm4 | 1.3e-46 | 66.88 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEFYIRGNTIKYLRVPDEGSLIKLKLVVFGEIWGERGEVEDEAR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPE YIRGNTIKYLRVPDE V+ +V++E
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEFYIRGNTIKYLRVPDEGSLIKLKLVVFGEIWGERGEVEDEAR
Query: ASWRATRNRKPLGVGRGRGRGR-EDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPG
++ +R+P GVGRGRGRG PGGR G+GRG DDG GGRG+GG GGK G
Subjt: ASWRATRNRKPLGVGRGRGRGR-EDGPGGRSAKGMGRGFDDGAKAASGGRGKGGPGGKPG
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| Q9ZRU9 Probable U6 snRNA-associated Sm-like protein LSm4 | 5.5e-45 | 63.75 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEFYIRGNTIKYLRVPDEGSLIKLKLVVFGEIWGERGEVEDEAR
MLPLSLLKTAQGHPMLVELK+GETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMP+ YIRGNTIKYLRVPD EV D+ +
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEFYIRGNTIKYLRVPDEGSLIKLKLVVFGEIWGERGEVEDEAR
Query: ASWRATRNRKPLGVGRGRGRGREDGPGGRSAKGMGRG-FDDGAKAASGGRGKGGPGGKPG
++ +RKP GVGRGRGRGRE+G G R +G GR AKA RG+G GK G
Subjt: ASWRATRNRKPLGVGRGRGRGREDGPGGRSAKGMGRG-FDDGAKAASGGRGKGGPGGKPG
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G20580.1 Small nuclear ribonucleoprotein family protein | 3.4e-10 | 32.68 | Show/hide |
Query: LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEFYIRGNTIKYLRVPDEGSLIKLKLVVFGEIWGERGEVEDEARA
+P+ LL A GH + VELK+GE Y G ++ C+ N L ++ T+KDG + ++ +IRG+ ++++ +PD I +F + +AR
Subjt: LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEFYIRGNTIKYLRVPDEGSLIKLKLVVFGEIWGERGEVEDEARA
Query: SWRATRNRKPLGVGRGRGRGREDGPGGRSAKGMGRGFDDGAKAASGGRGKGGP
+++ LGVGRGRG R G+ A G GRG +GGRG P
Subjt: SWRATRNRKPLGVGRGRGRGREDGPGGRSAKGMGRGFDDGAKAASGGRGKGGP
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| AT1G76300.1 snRNP core protein SMD3 | 1.1e-08 | 30.88 | Show/hide |
Query: LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEFYIRGNTIKYLRVPDEGSLIKLKLVVFGEIWGERGEVEDEARA
+P+ LL + GH + VE+K+GE Y G ++ C+ N L + T+KDG + ++ +IRG+ +++L +PD ++K +F ++ G+
Subjt: LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEFYIRGNTIKYLRVPDEGSLIKLKLVVFGEIWGERGEVEDEARA
Query: SWRATRNRKPLGVGRGRGRGREDGPGGRSAKGMGRG
LGVGRGRG GR G GRG
Subjt: SWRATRNRKPLGVGRGRGRGREDGPGGRSAKGMGRG
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| AT3G07590.1 Small nuclear ribonucleoprotein family protein | 3.6e-07 | 35.14 | Show/hide |
Query: VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEFYIRGNTIKYLRVPDEGSLIKLKLVVFGEIWGERGEVEDEARASWRATRNRKPLGVGR
+ELKNG +G + D MN HL+ V + K G + +RGN I+Y +PD +L L VED R + K +G GR
Subjt: VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEFYIRGNTIKYLRVPDEGSLIKLKLVVFGEIWGERGEVEDEARASWRATRNRKPLGVGR
Query: GRGRGREDGPG
GRGRGR G G
Subjt: GRGRGREDGPG
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| AT4G02840.1 Small nuclear ribonucleoprotein family protein | 1.4e-08 | 37.72 | Show/hide |
Query: VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEFYIRGNTIKYLRVPDEGSLIKLKLVVFGEIWGERGEVEDEARAS-WRATRNRKPLGVG
+ELKNG +G + D MN HL+ V T K G + +RGN I+Y +PD +L L VED R + T + P G G
Subjt: VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEFYIRGNTIKYLRVPDEGSLIKLKLVVFGEIWGERGEVEDEARAS-WRATRNRKPLGVG
Query: RGRGRGREDGPGGR
RGRGRGR G GGR
Subjt: RGRGRGREDGPGGR
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| AT5G27720.1 Small nuclear ribonucleoprotein family protein | 1.3e-44 | 65.13 | Show/hide |
Query: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEFYIRGNTIKYLRVPDEGSLIKLKLVVFGEIWGERGEVEDEAR
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPE YIRGNTIKYLRVPDE V+ +V++E
Subjt: MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPEFYIRGNTIKYLRVPDEGSLIKLKLVVFGEIWGERGEVEDEAR
Query: ASWRATRNRKPLGVGRGRGRGREDGPGGRSAKGMGRGFDDGAKAASGGRGKG
+ +RKP GVGRGRGRG +DG A+G GRG G + G G+G
Subjt: ASWRATRNRKPLGVGRGRGRGREDGPGGRSAKGMGRGFDDGAKAASGGRGKG
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