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MELO3C024094 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C024094
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
Descriptionextensin-like isoform X2
Genome locationchr01:8965042..8965992
RNA-Seq ExpressionMELO3C024094
SyntenyMELO3C024094
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0068050.1 hypothetical protein E6C27_scaffold4741G00020 [Cucumis melo var. makuwa]2.1e-35100Show/hide
Query:  MQGKIGPPIMVSLVISVLVVALSLSYTTVQAYQDSYSSTLTFKDHDKHKSPPPPSRKKSPPPPPPSKRKSPPPPPPKRNEYLSPPPPPK
        MQGKIGPPIMVSLVISVLVVALSLSYTTVQAYQDSYSSTLTFKDHDKHKSPPPPSRKKSPPPPPPSKRKSPPPPPPKRNEYLSPPPPPK
Subjt:  MQGKIGPPIMVSLVISVLVVALSLSYTTVQAYQDSYSSTLTFKDHDKHKSPPPPSRKKSPPPPPPSKRKSPPPPPPKRNEYLSPPPPPK

KAG6592192.1 hypothetical protein SDJN03_14538, partial [Cucurbita argyrosperma subsp. sororia]4.3e-0445.95Show/hide
Query:  PPIMVSLVISVLVVALSLSYTTVQAYQDSYS-----------------------STLTFKDHDKHKSPPPPSRKKSPP----PPPPSKRKSPPPPPPKRN
        P I+V LVI+V VVALSLS T+ + Y + YS                       S    K  D++KSPPPPS KKSPP    PPPP  +KSPPPPPP++ 
Subjt:  PPIMVSLVISVLVVALSLSYTTVQAYQDSYS-----------------------STLTFKDHDKHKSPPPPSRKKSPP----PPPPSKRKSPPPPPPKRN

Query:  EYLSPPPPPKN
           SPPPP K+
Subjt:  EYLSPPPPPKN

XP_011659754.2 extensin-3-like [Cucumis sativus]4.9e-1663.21Show/hide
Query:  MQGKIGPPIMVSLVISVLVVALSLSY-TTVQAYQDSYSSTLTFKDHD-----------------KHKSPPPPSRKKSPPPPPPSKRKSPPPPPPKRNEYL
        MQGK+GPP+M+SLVI+VLVVALSLSY TT QA++DSYSSTLTF DHD                  H         KS PPPPP KRKSPPPPPPKR+EYL
Subjt:  MQGKIGPPIMVSLVISVLVVALSLSY-TTVQAYQDSYSSTLTFKDHD-----------------KHKSPPPPSRKKSPPPPPPSKRKSPPPPPPKRNEYL

Query:  SPPPPP
        SPPPPP
Subjt:  SPPPPP

XP_022936365.1 extensin-3-like isoform X1 [Cucurbita moschata]9.6e-0445.87Show/hide
Query:  PPIMVSLVISVLVVALSLSYTTVQAYQDSYS-----------------------STLTFKDHDKHKSPPPPSRKKSPP----PPPPSKRKSPPPPPPKRN
        P I+V LVI+V VVALSLS T+ + Y + YS                       S    K  D++KSPPPPS KKSPP    PPPP  +KSPPPPPP++ 
Subjt:  PPIMVSLVISVLVVALSLSYTTVQAYQDSYS-----------------------STLTFKDHDKHKSPPPPSRKKSPP----PPPPSKRKSPPPPPPKRN

Query:  EYLSPPPPP
            PPPPP
Subjt:  EYLSPPPPP

XP_022976650.1 extensin-3-like [Cucurbita maxima]1.9e-0451.49Show/hide
Query:  IGPP-IMVSLVISVLVVALSLSYTTVQAYQDSYS----------------STLTFKDHDKHKSPPPPSRKKSPPPPPPSKRKSPPPPPPKRNEYLSPPPP
        +GPP I+V LVI+V VVALS S TT + Y D YS                S    K  D++KSPPPP  KKSPPPPPP ++K PPPP PK+    SPPPP
Subjt:  IGPP-IMVSLVISVLVVALSLSYTTVQAYQDSYS----------------STLTFKDHDKHKSPPPPSRKKSPPPPPPSKRKSPPPPPPKRNEYLSPPPP

Query:  P
        P
Subjt:  P

TrEMBL top hitse value%identityAlignment
A0A5A7VLF0 Uncharacterized protein1.0e-35100Show/hide
Query:  MQGKIGPPIMVSLVISVLVVALSLSYTTVQAYQDSYSSTLTFKDHDKHKSPPPPSRKKSPPPPPPSKRKSPPPPPPKRNEYLSPPPPPK
        MQGKIGPPIMVSLVISVLVVALSLSYTTVQAYQDSYSSTLTFKDHDKHKSPPPPSRKKSPPPPPPSKRKSPPPPPPKRNEYLSPPPPPK
Subjt:  MQGKIGPPIMVSLVISVLVVALSLSYTTVQAYQDSYSSTLTFKDHDKHKSPPPPSRKKSPPPPPPSKRKSPPPPPPKRNEYLSPPPPPK

A0A6J1F841 extensin-like isoform X24.6e-0445.87Show/hide
Query:  PPIMVSLVISVLVVALSLSYTTVQAYQDSYS-----------------------STLTFKDHDKHKSPPPPSRKKSPP----PPPPSKRKSPPPPPPKRN
        P I+V LVI+V VVALSLS T+ + Y + YS                       S    K  D++KSPPPPS KKSPP    PPPP  +KSPPPPPP++ 
Subjt:  PPIMVSLVISVLVVALSLSYTTVQAYQDSYS-----------------------STLTFKDHDKHKSPPPPSRKKSPP----PPPPSKRKSPPPPPPKRN

Query:  EYLSPPPPP
            PPPPP
Subjt:  EYLSPPPPP

A0A6J1FDF6 extensin-3-like isoform X14.6e-0445.87Show/hide
Query:  PPIMVSLVISVLVVALSLSYTTVQAYQDSYS-----------------------STLTFKDHDKHKSPPPPSRKKSPP----PPPPSKRKSPPPPPPKRN
        P I+V LVI+V VVALSLS T+ + Y + YS                       S    K  D++KSPPPPS KKSPP    PPPP  +KSPPPPPP++ 
Subjt:  PPIMVSLVISVLVVALSLSYTTVQAYQDSYS-----------------------STLTFKDHDKHKSPPPPSRKKSPP----PPPPSKRKSPPPPPPKRN

Query:  EYLSPPPPP
            PPPPP
Subjt:  EYLSPPPPP

A0A6J1FDF9 extensin-1-like isoform X34.6e-0445.87Show/hide
Query:  PPIMVSLVISVLVVALSLSYTTVQAYQDSYS-----------------------STLTFKDHDKHKSPPPPSRKKSPP----PPPPSKRKSPPPPPPKRN
        P I+V LVI+V VVALSLS T+ + Y + YS                       S    K  D++KSPPPPS KKSPP    PPPP  +KSPPPPPP++ 
Subjt:  PPIMVSLVISVLVVALSLSYTTVQAYQDSYS-----------------------STLTFKDHDKHKSPPPPSRKKSPP----PPPPSKRKSPPPPPPKRN

Query:  EYLSPPPPP
            PPPPP
Subjt:  EYLSPPPPP

A0A6J1IK20 extensin-3-like9.3e-0551.49Show/hide
Query:  IGPP-IMVSLVISVLVVALSLSYTTVQAYQDSYS----------------STLTFKDHDKHKSPPPPSRKKSPPPPPPSKRKSPPPPPPKRNEYLSPPPP
        +GPP I+V LVI+V VVALS S TT + Y D YS                S    K  D++KSPPPP  KKSPPPPPP ++K PPPP PK+    SPPPP
Subjt:  IGPP-IMVSLVISVLVVALSLSYTTVQAYQDSYS----------------STLTFKDHDKHKSPPPPSRKKSPPPPPPSKRKSPPPPPPKRNEYLSPPPP

Query:  P
        P
Subjt:  P

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGGAAAAATTGGTCCTCCTATAATGGTCTCTCTTGTTATTTCCGTTTTGGTGGTAGCTCTAAGCCTATCGTATACAACTGTTCAAGCCTACCAAGATTCCTACTC
TTCAACGCTTACCTTTAAGGATCATGACAAACACAAATCTCCACCCCCACCGTCTCGAAAGAAGTCTCCTCCACCGCCACCTCCGTCCAAAAGGAAGTCCCCCCCTCCAC
CACCACCAAAGAGAAATGAATATCTCTCACCTCCACCACCTCCAAAAAACACGATAACAAGTCACCTCCTCCTCCACCGCCAAAAGAGAAGACTCCTCCACGACCAAGAA
AGTCTCCCCCTCCACCACCACCAAGAAAGCATGATAACAAGTCACCACCTCCACCACCACCAAGAAAGCGTGATAACAAGTCACCTCCACCACCGCCACCAAAGAAACAC
GAATATGACTCCTATCCTCCACCACCACCACCAAGGAAGCATAAGGACAAGTCCCCTCTTCACCACGATCCCCTCACAATTAATTAGGTCAATATAA
mRNA sequenceShow/hide mRNA sequence
AAGAAAACCCAAGAGTTGTGGATATGCAAGGAAAAATTGGTCCTCCTATAATGGTCTCTCTTGTTATTTCCGTTTTGGTGGTAGCTCTAAGCCTATCGTATACAACTGTT
CAAGCCTACCAAGATTCCTACTCTTCAACGCTTACCTTTAAGGATCATGACAAACACAAATCTCCACCCCCACCGTCTCGAAAGAAGTCTCCTCCACCGCCACCTCCGTC
CAAAAGGAAGTCCCCCCCTCCACCACCACCAAAGAGAAATGAATATCTCTCACCTCCACCACCTCCAAAAAACACGATAACAAGTCACCTCCTCCTCCACCGCCAAAAGA
GAAGACTCCTCCACGACCAAGAAAGTCTCCCCCTCCACCACCACCAAGAAAGCATGATAACAAGTCACCACCTCCACCACCACCAAGAAAGCGTGATAACAAGTCACCTC
CACCACCGCCACCAAAGAAACACGAATATGACTCCTATCCTCCACCACCACCACCAAGGAAGCATAAGGACAAGTCCCCTCTTCACCACGATCCCCTCACAATTAATTAG
GTCAATATAAGGAATTCTCATCGACTATAAACCAAAAGAAGGAAAAAGAATAAAGAAGTGAAGAAGTATGTATTTAGGTCAACTAAAGAAAACAACTTAAAAGTGTAAAA
AAGAAGGTTGTTTTCATCTATTTGCTATACCTATGATTCTACGTGTTTTCTACGTGTGTCTTTAGTATTCCGTTGATTAAATAAAAGTCCATCTTACTTTCGTGTGTTTC
CTAGGGAAAAAAAGAATCAGCTCTTCTTATTCTTATGCGACACATGAAATATTAAATAGAAAATACGGTATAATTTTATGAG
Protein sequenceShow/hide protein sequence
MQGKIGPPIMVSLVISVLVVALSLSYTTVQAYQDSYSSTLTFKDHDKHKSPPPPSRKKSPPPPPPSKRKSPPPPPPKRNEYLSPPPPPKNTITSHLLLHRQKRRLLHDQE
SLPLHHHQESMITSHHLHHHQESVITSHLHHRHQRNTNMTPILHHHHQGSIRTSPLFTTIPSQLIRSI