; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C024110 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C024110
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionChlorophyll a/b-binding family protein
Genome locationchr01:9450911..9451692
RNA-Seq ExpressionMELO3C024110
SyntenyMELO3C024110
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048752.1 hypothetical protein E6C27_scaffold43G00600 [Cucumis melo var. makuwa]4.6e-6199.21Show/hide
Query:  MGRHDSEPTMVGTSIALLQERFRQLQKNKQKRERKELLNLLFESNRVDASIMHLEPEPNGSLTSRVLDSNSLSLGLNLKHNEGKQVDIDIHEARSVPSDT
        MGRHDSEPTMVGTSIALLQERFRQLQKNKQKRERKELLNLLFESNRVDASIMHLEPEPNGSLT RVLDSNSLSLGLNLKHNEGKQVDIDIHEARSVPSDT
Subjt:  MGRHDSEPTMVGTSIALLQERFRQLQKNKQKRERKELLNLLFESNRVDASIMHLEPEPNGSLTSRVLDSNSLSLGLNLKHNEGKQVDIDIHEARSVPSDT

Query:  KFGPENSFMVSTLRSFDTNVDTTLHL
        KFGPENSFMVSTLRSFDTNVDTTLHL
Subjt:  KFGPENSFMVSTLRSFDTNVDTTLHL

KAE8646145.1 hypothetical protein Csa_016195, partial [Cucumis sativus]4.1e-4187.16Show/hide
Query:  MGRHDSEPTMVGTSIALLQERFRQLQKNKQKRERKELLNLLFESNRVDASIMHLEPEPNGSLTSRVLDSNSLSLGLNLKHNEGKQVDIDIHEARSVPSDT
        MGRH+SEPTMVGTSIALLQERFRQLQKNKQ+RERKELLNLLFESNRVDASIMHL  EPNGS TSR LDSNSLSLGLNL++N GKQVDIDIHEARS+P DT
Subjt:  MGRHDSEPTMVGTSIALLQERFRQLQKNKQKRERKELLNLLFESNRVDASIMHLEPEPNGSLTSRVLDSNSLSLGLNLKHNEGKQVDIDIHEARSVPSDT

Query:  KFGPENSFM
        KF   NSFM
Subjt:  KFGPENSFM

KAG6572236.1 hypothetical protein SDJN03_28964, partial [Cucurbita argyrosperma subsp. sororia]2.2e-1854.2Show/hide
Query:  MGRHDSEPTMVGTSIALLQERFRQLQKNKQKRERKELLNLLFESNRVDASIMHLEPEPNGSLTSRVLDSNSLSLGLNLKHNEGKQVDIDIHEARSVPSDT
        M RH SEP +VGTSIALLQERFRQLQK K +RE+KE++ LL +SN +               TSR L  NSLSLGLNL  N GKQV  D HE R +P DT
Subjt:  MGRHDSEPTMVGTSIALLQERFRQLQKNKQKRERKELLNLLFESNRVDASIMHLEPEPNGSLTSRVLDSNSLSLGLNLKHNEGKQVDIDIHEARSVPSDT

Query:  KFGPENSFMVSTLRSFDT-----NVDTTLHL
        K  P       T RS+DT     +VDTTLHL
Subjt:  KFGPENSFMVSTLRSFDT-----NVDTTLHL

KAG6589104.1 hypothetical protein SDJN03_17669, partial [Cucurbita argyrosperma subsp. sororia]8.0e-2160.33Show/hide
Query:  MGRHDSEPTMVGTSIALLQERFRQLQKNKQKRERKELLNLLFESNRVD-ASIMHLEPEPNGSLTSRVLDSNSLSLGLNLKHNEGKQVDIDIHEARSVPS-
        MGRH SE TM+GTSIALLQERFRQLQK+KQ+RE+KELL+LL +SNRV+ +SIMHL  E N S  SR L+ +SLSLGLN   + GKQV  DIHEAR++ S 
Subjt:  MGRHDSEPTMVGTSIALLQERFRQLQKNKQKRERKELLNLLFESNRVD-ASIMHLEPEPNGSLTSRVLDSNSLSLGLNLKHNEGKQVDIDIHEARSVPS-

Query:  ------DTKFGPENSFMVSTL
              +T+F P   F++S L
Subjt:  ------DTKFGPENSFMVSTL

XP_023916992.1 uncharacterized protein LOC112028527 [Quercus suber]8.5e-1546.21Show/hide
Query:  MGRHDSEPTMVGTSIALLQERFRQLQKNKQKRERKELLNLLFESNRVDASIMHLEP-----EPNGSLTSRVLDSNSLSLGLNLKHNEGKQVDIDIHEARS
        MGR  ++PTMV +SIALLQERFRQL+K K++RE KELLNL  E+ R+     H EP     +P  +  +R    +S SL LNL   + KQ D+   +A  
Subjt:  MGRHDSEPTMVGTSIALLQERFRQLQKNKQKRERKELLNLLFESNRVDASIMHLEP-----EPNGSLTSRVLDSNSLSLGLNLKHNEGKQVDIDIHEARS

Query:  VPSDTKFGPENSFMVSTLRSFD-TNVDTTLHL
         P+ T   P ++ M ST RSF+ ++VDT+LHL
Subjt:  VPSDTKFGPENSFMVSTLRSFD-TNVDTTLHL

TrEMBL top hitse value%identityAlignment
A0A0A0K617 Uncharacterized protein1.3e-4886.61Show/hide
Query:  MGRHDSEPTMVGTSIALLQERFRQLQKNKQKRERKELLNLLFESNRVDASIMHLEPEPNGSLTSRVLDSNSLSLGLNLKHNEGKQVDIDIHEARSVPSDT
        MGRH+SEPTMVGTSIALLQERFRQLQKNKQ+RERKELLNLLFESNRVDASIMHL  EPNGS TSR LDSNSLSLGLNL++N GKQVDIDIHEARS+P DT
Subjt:  MGRHDSEPTMVGTSIALLQERFRQLQKNKQKRERKELLNLLFESNRVDASIMHLEPEPNGSLTSRVLDSNSLSLGLNLKHNEGKQVDIDIHEARSVPSDT

Query:  KFGPENSFMVSTLRSFDT-NVDTTLHL
        KF   NSFMVST RSFD+ NVDTTLHL
Subjt:  KFGPENSFMVSTLRSFDT-NVDTTLHL

A0A2N9FNY6 Uncharacterized protein6.0e-1445.45Show/hide
Query:  MGRHDSEPTMVGTSIALLQERFRQLQKNKQKRERKELLNLLFESNRVDASIMHLEP-----EPNGSLTSRVLDSNSLSLGLNLKHNEGKQVDIDIHEARS
        MGR  ++PTMV +SIALLQERFRQL+K K++RE KELL L  E+ R+     H EP     +P      R    +S SLGLNL   + KQ D    +A  
Subjt:  MGRHDSEPTMVGTSIALLQERFRQLQKNKQKRERKELLNLLFESNRVDASIMHLEP-----EPNGSLTSRVLDSNSLSLGLNLKHNEGKQVDIDIHEARS

Query:  VPSDTKFGPENSFMVSTLRSFD-TNVDTTLHL
        +P+     P  + M ST RSF+ ++VDT+LHL
Subjt:  VPSDTKFGPENSFMVSTLRSFD-TNVDTTLHL

A0A5D3E685 Uncharacterized protein2.2e-6199.21Show/hide
Query:  MGRHDSEPTMVGTSIALLQERFRQLQKNKQKRERKELLNLLFESNRVDASIMHLEPEPNGSLTSRVLDSNSLSLGLNLKHNEGKQVDIDIHEARSVPSDT
        MGRHDSEPTMVGTSIALLQERFRQLQKNKQKRERKELLNLLFESNRVDASIMHLEPEPNGSLT RVLDSNSLSLGLNLKHNEGKQVDIDIHEARSVPSDT
Subjt:  MGRHDSEPTMVGTSIALLQERFRQLQKNKQKRERKELLNLLFESNRVDASIMHLEPEPNGSLTSRVLDSNSLSLGLNLKHNEGKQVDIDIHEARSVPSDT

Query:  KFGPENSFMVSTLRSFDTNVDTTLHL
        KFGPENSFMVSTLRSFDTNVDTTLHL
Subjt:  KFGPENSFMVSTLRSFDTNVDTTLHL

A0A7N2M9I5 Uncharacterized protein5.0e-1344.7Show/hide
Query:  MGRHDSEPTMVGTSIALLQERFRQLQKNKQKRERKELLNLLFESNRVDASIMHLEP-----EPNGSLTSRVLDSNSLSLGLNLKHNEGKQVDIDIHEARS
        M R  ++ TMV +SIALLQERFRQL+K K++RE KELLNL  E+ R+     H EP     +P  +  +R    +S SL LNL   + KQ D+   +A  
Subjt:  MGRHDSEPTMVGTSIALLQERFRQLQKNKQKRERKELLNLLFESNRVDASIMHLEP-----EPNGSLTSRVLDSNSLSLGLNLKHNEGKQVDIDIHEARS

Query:  VPSDTKFGPENSFMVSTLRSFD-TNVDTTLHL
         P+ T   P  + M ST RSF+ ++VDT+LHL
Subjt:  VPSDTKFGPENSFMVSTLRSFD-TNVDTTLHL

G7KEN3 Uncharacterized protein2.0e-1447.24Show/hide
Query:  MGRHDSEPTMVGTSIALLQERFRQLQKNKQKRERKELLNLLFESNRVDASIMHLEPEPNGSLTSRVLDSNSLSLGLNLKHNEGKQVDIDIHEARSVPSDT
        MGR D++PTMV +SIALLQERFRQL+K K++RE K+LL LL   N   AS   L   PN    +R    +SLSLGLNL   +G        +  ++ S+T
Subjt:  MGRHDSEPTMVGTSIALLQERFRQLQKNKQKRERKELLNLLFESNRVDASIMHLEPEPNGSLTSRVLDSNSLSLGLNLKHNEGKQVDIDIHEARSVPSDT

Query:  KFGPENSFMVSTLRSFDT-NVDTTLHL
           P +    ST R+FDT +VDT+LHL
Subjt:  KFGPENSFMVSTLRSFDT-NVDTTLHL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAGGCACGATAGTGAACCTACCATGGTTGGTACCTCCATAGCTCTGTTACAAGAAAGATTTAGACAATTGCAGAAAAACAAGCAAAAAAGAGAGAGGAAGGAGCT
TCTTAACCTGCTATTCGAATCAAATAGGGTCGATGCCTCGATAATGCATTTAGAACCAGAACCAAATGGCTCGTTGACCTCAAGAGTTTTGGATTCCAATTCCCTCTCCC
TTGGTTTGAATTTGAAGCATAATGAGGGTAAGCAAGTTGATATTGATATCCATGAAGCCAGGTCGGTGCCAAGTGACACCAAGTTCGGGCCCGAAAACTCATTCATGGTG
AGTACATTAAGAAGTTTCGATACAAATGTCGATACCACTCTTCATCTATAG
mRNA sequenceShow/hide mRNA sequence
AAGAGCAAAACATTCTAATCCTAATATCTTATAAGTACACATTGATCTCCATAACTATGTACACTTCACATACTATAAGCAGCTGCAGCTTAAACTCCCCTTGAGAGTGT
TCTCCAATGGGTAGGCACGATAGTGAACCTACCATGGTTGGTACCTCCATAGCTCTGTTACAAGAAAGATTTAGACAATTGCAGAAAAACAAGCAAAAAAGAGAGAGGAA
GGAGCTTCTTAACCTGCTATTCGAATCAAATAGGGTCGATGCCTCGATAATGCATTTAGAACCAGAACCAAATGGCTCGTTGACCTCAAGAGTTTTGGATTCCAATTCCC
TCTCCCTTGGTTTGAATTTGAAGCATAATGAGGGTAAGCAAGTTGATATTGATATCCATGAAGCCAGGTCGGTGCCAAGTGACACCAAGTTCGGGCCCGAAAACTCATTC
ATGGTGAGTACATTAAGAAGTTTCGATACAAATGTCGATACCACTCTTCATCTATAGATAATTTCTTCACCTAGTATTTCTGTTAGCTTTATTTGCTTGGTTCTCTCCCC
ACCTAAGAATGAAAAAACGTGTGTTGAATTGATATCTGATGTGATCAATATGCATTCTATTGATGATGTCCTAGACATTTTGTAAGATGTCTATTTGCTTGGTTAGTTTA
GCTCCAGGAATGTGCATAATGAGAGAGAGAGAGAGGGAAGGAAGGGAAGTGATGGAAAAACAACTCTTAAGTGAGACCATGTCTTTTACCAATTCCATTATGTTTAAATC
TCTCTCTTTGGG
Protein sequenceShow/hide protein sequence
MGRHDSEPTMVGTSIALLQERFRQLQKNKQKRERKELLNLLFESNRVDASIMHLEPEPNGSLTSRVLDSNSLSLGLNLKHNEGKQVDIDIHEARSVPSDTKFGPENSFMV
STLRSFDTNVDTTLHL