; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C024255 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C024255
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
Description30S ribosomal protein S17, chloroplastic
Genome locationchr01:34344856..34345601
RNA-Seq ExpressionMELO3C024255
SyntenyMELO3C024255
Gene Ontology termsGO:0032544 - plastid translation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR000266 - Ribosomal protein S17/S11
IPR012340 - Nucleic acid-binding, OB-fold
IPR019979 - Ribosomal protein S17, conserved site
IPR019984 - 30S ribosomal protein S17


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059310.1 30S ribosomal protein S17 [Cucumis melo var. makuwa]9.8e-8099.39Show/hide
Query:  MSTTLTSSSLLQIPPLQSLKKLSISSSFLHGSTPLSFLSKPSSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK
        MSTTLTSSSLLQIPPLQSLKKLSISSSFLHGSTPLSFLSK SSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK
Subjt:  MSTTLTSSSLLQIPPLQSLKKLSISSSFLHGSTPLSFLSKPSSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK

Query:  YQAHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQEQV
        YQAHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQEQV
Subjt:  YQAHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQEQV

XP_004141765.1 30S ribosomal protein S17, chloroplastic [Cucumis sativus]3.9e-7695.12Show/hide
Query:  MSTTLTSSSLLQIPPLQSLKKLSISSSFLHGSTPLSFLSKPSSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK
        MS TLTSSSLLQIPP+QSLKKLSISSSFLHGSTPLSFLSKPSSS SP  SQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK
Subjt:  MSTTLTSSSLLQIPPLQSLKKLSISSSFLHGSTPLSFLSKPSSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK

Query:  YQAHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQEQV
        YQAHDPDNQF+VGDFVELEKCRPISKMKTFLAIPVPAR SKKKA EGGEGGELGIPLESQQEQV
Subjt:  YQAHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQEQV

XP_008462167.1 PREDICTED: 30S ribosomal protein S17, chloroplastic [Cucumis melo]1.2e-80100Show/hide
Query:  MSTTLTSSSLLQIPPLQSLKKLSISSSFLHGSTPLSFLSKPSSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK
        MSTTLTSSSLLQIPPLQSLKKLSISSSFLHGSTPLSFLSKPSSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK
Subjt:  MSTTLTSSSLLQIPPLQSLKKLSISSSFLHGSTPLSFLSKPSSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK

Query:  YQAHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQEQV
        YQAHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQEQV
Subjt:  YQAHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQEQV

XP_023548191.1 30S ribosomal protein S17, chloroplastic-like [Cucurbita pepo subsp. pepo]1.8e-6587.04Show/hide
Query:  MSTTLTSSSLLQIPPLQSLKKLSISSSFLHGSTPLSFLSKPSSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK
        MS TL+ SS LQIPPLQ LK LS+S+SFLHGS PLSFLSKP  SPS  ASQTPNFLPSI+AMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK
Subjt:  MSTTLTSSSLLQIPPLQSLKKLSISSSFLHGSTPLSFLSKPSSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK

Query:  YQAHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQE
        YQAHDPDN+FKVGDFVELEKCRPISKMKTFLAIPVPAR SK KAAE G  GELGIPLESQQ+
Subjt:  YQAHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQE

XP_038898716.1 30S ribosomal protein S17, chloroplastic [Benincasa hispida]5.1e-6889.63Show/hide
Query:  MSTTLTSSSLLQIPPLQSLKKLSISSSFLHGSTPLSFLSKPSSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK
        MS TLTSSSLLQIPPLQ LKKLSIS+SFLHGS+PL F SK    PSP A QTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK
Subjt:  MSTTLTSSSLLQIPPLQSLKKLSISSSFLHGSTPLSFLSKPSSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK

Query:  YQAHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQEQV
        YQAHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVP R+SKKKAAE G+ GELGIPLESQQEQV
Subjt:  YQAHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQEQV

TrEMBL top hitse value%identityAlignment
A0A0A0K952 Uncharacterized protein1.9e-7695.12Show/hide
Query:  MSTTLTSSSLLQIPPLQSLKKLSISSSFLHGSTPLSFLSKPSSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK
        MS TLTSSSLLQIPP+QSLKKLSISSSFLHGSTPLSFLSKPSSS SP  SQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK
Subjt:  MSTTLTSSSLLQIPPLQSLKKLSISSSFLHGSTPLSFLSKPSSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK

Query:  YQAHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQEQV
        YQAHDPDNQF+VGDFVELEKCRPISKMKTFLAIPVPAR SKKKA EGGEGGELGIPLESQQEQV
Subjt:  YQAHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQEQV

A0A1S3CGC8 30S ribosomal protein S17, chloroplastic5.6e-81100Show/hide
Query:  MSTTLTSSSLLQIPPLQSLKKLSISSSFLHGSTPLSFLSKPSSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK
        MSTTLTSSSLLQIPPLQSLKKLSISSSFLHGSTPLSFLSKPSSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK
Subjt:  MSTTLTSSSLLQIPPLQSLKKLSISSSFLHGSTPLSFLSKPSSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK

Query:  YQAHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQEQV
        YQAHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQEQV
Subjt:  YQAHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQEQV

A0A5A7UW29 30S ribosomal protein S17, chloroplastic4.8e-8099.39Show/hide
Query:  MSTTLTSSSLLQIPPLQSLKKLSISSSFLHGSTPLSFLSKPSSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK
        MSTTLTSSSLLQIPPLQSLKKLSISSSFLHGSTPLSFLSK SSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK
Subjt:  MSTTLTSSSLLQIPPLQSLKKLSISSSFLHGSTPLSFLSKPSSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK

Query:  YQAHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQEQV
        YQAHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQEQV
Subjt:  YQAHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQEQV

A0A6J1GQP3 30S ribosomal protein S17, chloroplastic-like3.7e-6486.25Show/hide
Query:  TTLTSSSLLQIPPLQSLKKLSISSSFLHGSTPLSFLSKPSSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKKYQ
        + L+ SS LQIPPLQ LK LSIS+SFLHGS PLSFLSKP  SPS  ASQTPNFLPSI+AMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKKYQ
Subjt:  TTLTSSSLLQIPPLQSLKKLSISSSFLHGSTPLSFLSKPSSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKKYQ

Query:  AHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQE
        AHDPDN+FKVGDFVELEKCRPISKMKTFLAIPVPAR SK KAAE G  GELGIPLESQ++
Subjt:  AHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQE

A0A6J1JVM9 30S ribosomal protein S17, chloroplastic-like5.7e-6587.04Show/hide
Query:  MSTTLTSSSLLQIPPLQSLKKLSISSSFLHGSTPLSFLSKPSSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK
        MS TL+ SS LQIPPLQ LK LS+S+SFLHGS PLSFLSKP  SPS  ASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK
Subjt:  MSTTLTSSSLLQIPPLQSLKKLSISSSFLHGSTPLSFLSKPSSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKK

Query:  YQAHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQE
        YQAHDPDN+FKVGDFVELEKCRPISKMKTFLAIPVPAR SK KAAE G  GEL IPLESQQ+
Subjt:  YQAHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQE

SwissProt top hitse value%identityAlignment
P16180 30S ribosomal protein S17, chloroplastic4.8e-4568.75Show/hide
Query:  SLKKLSISSSFLHGSTPLSFLSKPSSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKKYQAHDPDNQFKVGDFVE
        SL+ L +SS F HGSTPLS LSKP+S P+    + P  +P IRAM+++QGRVVCAT+DKTVAVEVVRLAPHPKYKRR+R+KKKYQAHDPDNQFKVGD V 
Subjt:  SLKKLSISSSFLHGSTPLSFLSKPSSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKKYQAHDPDNQFKVGDFVE

Query:  LEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQ
        LEK RPISK K+F+A+PV AR ++K  AE G    LG+PLESQQ
Subjt:  LEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQ

P17092 30S ribosomal protein S17, chloroplastic (Fragment)3.1e-3661.72Show/hide
Query:  LSFLSKPSSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKKYQAHDPDNQFKVGDFVELEKCRPISKMKTFLAIP
        L+  S P SSP           P+I+AM++++G+VVCA+ +KTVAVEV RLAPHPKY++RIR+KKKYQAHDP+N FKVGD V+L K RPISK KTFLA+P
Subjt:  LSFLSKPSSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKKYQAHDPDNQFKVGDFVELEKCRPISKMKTFLAIP

Query:  VPARTSKKKAAEGGEGGELGIPLESQQE
         P+R SKK     G  GELGIPL+SQQE
Subjt:  VPARTSKKKAAEGGEGGELGIPLESQQE

P82137 30S ribosomal protein S17, chloroplastic9.7e-3860.49Show/hide
Query:  SSSLLQIPPLQSLKKLSISSSFLHGSTP----LSFLSKPSSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKKYQ
        S SLL+ PPL S    S  + FLHG+T     L   S  S S SP +S T    P I+AMRS+QG+V+CATNDKTV VEVVRLAPHPKYKRR+R KKKYQ
Subjt:  SSSLLQIPPLQSLKKLSISSSFLHGSTP----LSFLSKPSSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKKYQ

Query:  AHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAE--GGEGGELGIPLESQQE
        AHDPDNQFKVGD+V+L+KCRPISK KTFLA+    R S     +       ELGIPLESQ E
Subjt:  AHDPDNQFKVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAE--GGEGGELGIPLESQQE

Q9TJN6 30S ribosomal protein S17, chloroplastic6.3e-2957.58Show/hide
Query:  STPLSFLSKPSSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKKYQAHDPDNQFKVGDFVELEKCRPISKMKTFL
        S+P   +S P   P PL+S        I A R L GRVV    DKTV VEVVRLAPHPKYKRR RIKKKYQAHDPDNQFKVGD VEL+  RPISK K FL
Subjt:  STPLSFLSKPSSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKKYQAHDPDNQFKVGDFVELEKCRPISKMKTFL

Query:  AIPVPARTSKKKAAEGGEGGELGIPLESQQEQ
        AIP+P R +++K+       +L  PL+S  +Q
Subjt:  AIPVPARTSKKKAAEGGEGGELGIPLESQQEQ

Q9ZST1 30S ribosomal protein S17, chloroplastic2.6e-2754.96Show/hide
Query:  STPLSFLSKPSSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKKYQAHDPDNQFKVGDFVELEKCRPISKMKTFL
        S+P+       S  SP A         I+A + L GRVV    DKTV VEVVRLAPHPKYKRR RIKKKYQAHDPDNQFKVGD VEL + RPISK K FL
Subjt:  STPLSFLSKPSSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKKYQAHDPDNQFKVGDFVELEKCRPISKMKTFL

Query:  AIPVPARTSKKKAAEGGEGGELGIPLESQQE
        A+P+P R +++K+       +L  PL+SQ +
Subjt:  AIPVPARTSKKKAAEGGEGGELGIPLESQQE

Arabidopsis top hitse value%identityAlignment
AT1G79850.1 ribosomal protein S173.4e-4668.75Show/hide
Query:  SLKKLSISSSFLHGSTPLSFLSKPSSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKKYQAHDPDNQFKVGDFVE
        SL+ L +SS F HGSTPLS LSKP+S P+    + P  +P IRAM+++QGRVVCAT+DKTVAVEVVRLAPHPKYKRR+R+KKKYQAHDPDNQFKVGD V 
Subjt:  SLKKLSISSSFLHGSTPLSFLSKPSSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKKYQAHDPDNQFKVGDFVE

Query:  LEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQ
        LEK RPISK K+F+A+PV AR ++K  AE G    LG+PLESQQ
Subjt:  LEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTACAACTCTAACTTCCTCATCCCTTCTTCAAATTCCTCCATTACAAAGCTTGAAGAAGCTCTCAATTTCTTCCTCTTTCCTCCATGGCTCAACTCCTCTCTCATT
CCTCTCTAAGCCCTCTTCCTCACCGTCGCCATTGGCCTCCCAAACCCCCAATTTCCTTCCCTCCATTAGGGCCATGAGGTCCCTGCAAGGCCGCGTGGTTTGTGCCACCA
ACGACAAAACCGTCGCCGTTGAGGTAGTCCGATTAGCGCCTCATCCGAAATATAAGCGTCGGATTAGAATCAAGAAGAAGTACCAGGCGCATGATCCGGATAACCAGTTC
AAGGTTGGAGATTTTGTGGAGCTTGAAAAATGCCGTCCGATTAGTAAGATGAAGACGTTCCTGGCTATTCCGGTTCCAGCGAGGACTTCGAAGAAGAAAGCGGCGGAAGG
CGGTGAGGGAGGAGAGCTTGGAATTCCATTGGAGTCTCAGCAAGAACAGGTTTGA
mRNA sequenceShow/hide mRNA sequence
TTCATTTCGGATAACACAAAAATCCCTAAAAAAAATGTCTACAACTCTAACTTCCTCATCCCTTCTTCAAATTCCTCCATTACAAAGCTTGAAGAAGCTCTCAATTTCTT
CCTCTTTCCTCCATGGCTCAACTCCTCTCTCATTCCTCTCTAAGCCCTCTTCCTCACCGTCGCCATTGGCCTCCCAAACCCCCAATTTCCTTCCCTCCATTAGGGCCATG
AGGTCCCTGCAAGGCCGCGTGGTTTGTGCCACCAACGACAAAACCGTCGCCGTTGAGGTAGTCCGATTAGCGCCTCATCCGAAATATAAGCGTCGGATTAGAATCAAGAA
GAAGTACCAGGCGCATGATCCGGATAACCAGTTCAAGGTTGGAGATTTTGTGGAGCTTGAAAAATGCCGTCCGATTAGTAAGATGAAGACGTTCCTGGCTATTCCGGTTC
CAGCGAGGACTTCGAAGAAGAAAGCGGCGGAAGGCGGTGAGGGAGGAGAGCTTGGAATTCCATTGGAGTCTCAGCAAGAACAGGTTTGATTGTAATTGGTTGATTTTGTG
GATCTGAATGTTGTTTGTGGTTTGATGAATGACTCGTGAATGTTGTATTGATGAGACTGGACCCAAGTTGTCCGAATTTTATAATATTTTCTTTTTCGAATTCTTTTTTG
AGTCTACATCTCTGCCATTGCCATTGCCATTGATGATGAACAAAGTGTTGTTGCTATTCAAATTTTCTTGATTCTTCCTTTTGGTT
Protein sequenceShow/hide protein sequence
MSTTLTSSSLLQIPPLQSLKKLSISSSFLHGSTPLSFLSKPSSSPSPLASQTPNFLPSIRAMRSLQGRVVCATNDKTVAVEVVRLAPHPKYKRRIRIKKKYQAHDPDNQF
KVGDFVELEKCRPISKMKTFLAIPVPARTSKKKAAEGGEGGELGIPLESQQEQV