; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C024259 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C024259
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
Descriptionprotein THYLAKOID ASSEMBLY 8, chloroplastic
Genome locationchr01:34388702..34389510
RNA-Seq ExpressionMELO3C024259
SyntenyMELO3C024259
Gene Ontology termsGO:0000373 - Group II intron splicing (biological process)
GO:0009658 - chloroplast organization (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR011990 - Tetratricopeptide-like helical domain superfamily
IPR044190 - Protein THYLAKOID ASSEMBLY 8-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059315.1 uncharacterized protein E6C27_scaffold242G00390 [Cucumis melo var. makuwa]4.1e-11699.13Show/hide
Query:  MASSLHSTFLKSQISIPIPTSTATAAVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQER
        MASSL STFLKSQISIPIPTSTATAAVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQER
Subjt:  MASSLHSTFLKSQISIPIPTSTATAAVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQER

Query:  CALALEVFAVIRSEYRAELGLYAEVAAALSRNGAAEEIDRLVCDLDGRDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRNGWGSMIKGDDYMI
        CALALEVFAVIRSEYRAELGLYAEVAAALSRNGAAEEIDRLVCDLDGRDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRNGWGSMIKGDDYMI
Subjt:  CALALEVFAVIRSEYRAELGLYAEVAAALSRNGAAEEIDRLVCDLDGRDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRNGWGSMIKGDDYMI

Query:  KVMSKGLRRVGEIELADEINREFQDLVGSL
        KVMSKGLRRVGE+ELADEINREFQDLVGSL
Subjt:  KVMSKGLRRVGEIELADEINREFQDLVGSL

XP_004141838.1 protein THYLAKOID ASSEMBLY 8, chloroplastic [Cucumis sativus]1.5e-11095.2Show/hide
Query:  MASSLHSTFLKSQISIPIPTSTATAAVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQER
        MASSLHSTFLKSQISIPIP STAT+ VAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQER
Subjt:  MASSLHSTFLKSQISIPIPTSTATAAVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQER

Query:  CALALEVFAVIRSEYRAELGLYAEVAAALSRNGAAEEIDRLVCDLDGRDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRNGWGSMIKGDDYMI
        CALALEVFAVI+SEYRAELGLYAEVAAALSRNGAAEEIDRLV DLDG DGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRR GWGSMIK DDYMI
Subjt:  CALALEVFAVIRSEYRAELGLYAEVAAALSRNGAAEEIDRLVCDLDGRDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRNGWGSMIKGDDYMI

Query:  KVMSKGLRRVGEIELADEINREFQDLVGS
        KV+SKGLRR+GEIELADEINREF+DLVGS
Subjt:  KVMSKGLRRVGEIELADEINREFQDLVGS

XP_008462172.1 PREDICTED: uncharacterized protein LOC103500597 [Cucumis melo]2.8e-117100Show/hide
Query:  MASSLHSTFLKSQISIPIPTSTATAAVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQER
        MASSLHSTFLKSQISIPIPTSTATAAVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQER
Subjt:  MASSLHSTFLKSQISIPIPTSTATAAVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQER

Query:  CALALEVFAVIRSEYRAELGLYAEVAAALSRNGAAEEIDRLVCDLDGRDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRNGWGSMIKGDDYMI
        CALALEVFAVIRSEYRAELGLYAEVAAALSRNGAAEEIDRLVCDLDGRDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRNGWGSMIKGDDYMI
Subjt:  CALALEVFAVIRSEYRAELGLYAEVAAALSRNGAAEEIDRLVCDLDGRDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRNGWGSMIKGDDYMI

Query:  KVMSKGLRRVGEIELADEINREFQDLVGSL
        KVMSKGLRRVGEIELADEINREFQDLVGSL
Subjt:  KVMSKGLRRVGEIELADEINREFQDLVGSL

XP_022992386.1 protein THYLAKOID ASSEMBLY 8, chloroplastic [Cucurbita maxima]1.1e-9282.53Show/hide
Query:  MASSLHSTFLKSQISIPIPTSTATAAVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQER
        MA SLHSTFLKSQI IPIP S ATA V VS  VRCGPRDNRGPLVKGRTLS EAIQAIQSLKRAE+SDPTKL+QVLSTTLSRLLKADLVATLKELLRQ+R
Subjt:  MASSLHSTFLKSQISIPIPTSTATAAVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQER

Query:  CALALEVFAVIRSEYRAELGLYAEVAAALSRNGAAEEIDRLVCDLDGRDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRNGWGSMIKGDDYMI
        CALALEVFAV+RSEY  +LG+YAEVAAALSRNGA EEIDRLVCDL+  D VI+   DDKGLIKLIKAVI G+RRESTVRIYRMM+R+GWGS IK DDYM+
Subjt:  CALALEVFAVIRSEYRAELGLYAEVAAALSRNGAAEEIDRLVCDLDGRDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRNGWGSMIKGDDYMI

Query:  KVMSKGLRRVGEIELADEINREFQDLVGS
        +V+SKGLRR+GE+E+ADEIN +FQDLVGS
Subjt:  KVMSKGLRRVGEIELADEINREFQDLVGS

XP_038898717.1 protein THYLAKOID ASSEMBLY 8, chloroplastic [Benincasa hispida]4.1e-10087.83Show/hide
Query:  MASSLHSTFLKSQISIPIPTSTATAAVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQER
        MASS+HSTFLKSQISIPIP S A AAVAVS  VRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVA+LKELLRQ+R
Subjt:  MASSLHSTFLKSQISIPIPTSTATAAVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQER

Query:  CALALEVFAVIRSEYRAELGLYAEVAAALSRNGAAEEIDRLVCDLDGRDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRNGWGSMIKGDDYMI
        CALALEVFAVIRSEY A+LG+YAEVAAALSRNGAAEEIDRLVCDLDG D +I+W  DDKGLIKLIKAVISG+RRESTVRIYRMMRRNGWGS IK DDY++
Subjt:  CALALEVFAVIRSEYRAELGLYAEVAAALSRNGAAEEIDRLVCDLDGRDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRNGWGSMIKGDDYMI

Query:  KVMSKGLRRVGEIELADEINREFQDLVGSL
        +V+SKGLRR GE+ELADEINREFQDLVG++
Subjt:  KVMSKGLRRVGEIELADEINREFQDLVGSL

TrEMBL top hitse value%identityAlignment
A0A0A0K6N6 Uncharacterized protein7.3e-11195.2Show/hide
Query:  MASSLHSTFLKSQISIPIPTSTATAAVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQER
        MASSLHSTFLKSQISIPIP STAT+ VAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQER
Subjt:  MASSLHSTFLKSQISIPIPTSTATAAVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQER

Query:  CALALEVFAVIRSEYRAELGLYAEVAAALSRNGAAEEIDRLVCDLDGRDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRNGWGSMIKGDDYMI
        CALALEVFAVI+SEYRAELGLYAEVAAALSRNGAAEEIDRLV DLDG DGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRR GWGSMIK DDYMI
Subjt:  CALALEVFAVIRSEYRAELGLYAEVAAALSRNGAAEEIDRLVCDLDGRDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRNGWGSMIKGDDYMI

Query:  KVMSKGLRRVGEIELADEINREFQDLVGS
        KV+SKGLRR+GEIELADEINREF+DLVGS
Subjt:  KVMSKGLRRVGEIELADEINREFQDLVGS

A0A1S3CGD3 uncharacterized protein LOC1035005971.4e-117100Show/hide
Query:  MASSLHSTFLKSQISIPIPTSTATAAVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQER
        MASSLHSTFLKSQISIPIPTSTATAAVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQER
Subjt:  MASSLHSTFLKSQISIPIPTSTATAAVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQER

Query:  CALALEVFAVIRSEYRAELGLYAEVAAALSRNGAAEEIDRLVCDLDGRDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRNGWGSMIKGDDYMI
        CALALEVFAVIRSEYRAELGLYAEVAAALSRNGAAEEIDRLVCDLDGRDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRNGWGSMIKGDDYMI
Subjt:  CALALEVFAVIRSEYRAELGLYAEVAAALSRNGAAEEIDRLVCDLDGRDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRNGWGSMIKGDDYMI

Query:  KVMSKGLRRVGEIELADEINREFQDLVGSL
        KVMSKGLRRVGEIELADEINREFQDLVGSL
Subjt:  KVMSKGLRRVGEIELADEINREFQDLVGSL

A0A5A7V0E2 Uncharacterized protein2.0e-11699.13Show/hide
Query:  MASSLHSTFLKSQISIPIPTSTATAAVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQER
        MASSL STFLKSQISIPIPTSTATAAVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQER
Subjt:  MASSLHSTFLKSQISIPIPTSTATAAVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQER

Query:  CALALEVFAVIRSEYRAELGLYAEVAAALSRNGAAEEIDRLVCDLDGRDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRNGWGSMIKGDDYMI
        CALALEVFAVIRSEYRAELGLYAEVAAALSRNGAAEEIDRLVCDLDGRDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRNGWGSMIKGDDYMI
Subjt:  CALALEVFAVIRSEYRAELGLYAEVAAALSRNGAAEEIDRLVCDLDGRDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRNGWGSMIKGDDYMI

Query:  KVMSKGLRRVGEIELADEINREFQDLVGSL
        KVMSKGLRRVGE+ELADEINREFQDLVGSL
Subjt:  KVMSKGLRRVGEIELADEINREFQDLVGSL

A0A6J1GQS0 protein THYLAKOID ASSEMBLY 8, chloroplastic4.5e-9281.66Show/hide
Query:  MASSLHSTFLKSQISIPIPTSTATAAVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQER
        MA SLHSTFLKSQI IPIP S A A V VS  VRCGPRDNRGPLVKGRTLS EAIQAIQSLKRAE+SDPTKL+QVLSTTLSRLLKADLVATLKELLRQ+R
Subjt:  MASSLHSTFLKSQISIPIPTSTATAAVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQER

Query:  CALALEVFAVIRSEYRAELGLYAEVAAALSRNGAAEEIDRLVCDLDGRDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRNGWGSMIKGDDYMI
        CALALEVFAV+RSEY A+LG+YAEVAAALSRNGA EEIDRLVCDL+  D VI+   DDKGLIKLIKAVI G+RRESTVRIYRMM+R+GWGS IK DDY +
Subjt:  CALALEVFAVIRSEYRAELGLYAEVAAALSRNGAAEEIDRLVCDLDGRDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRNGWGSMIKGDDYMI

Query:  KVMSKGLRRVGEIELADEINREFQDLVGS
        +V+SKGLRR+GE+E+ADE+N +FQDLVGS
Subjt:  KVMSKGLRRVGEIELADEINREFQDLVGS

A0A6J1JTE8 protein THYLAKOID ASSEMBLY 8, chloroplastic5.3e-9382.53Show/hide
Query:  MASSLHSTFLKSQISIPIPTSTATAAVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQER
        MA SLHSTFLKSQI IPIP S ATA V VS  VRCGPRDNRGPLVKGRTLS EAIQAIQSLKRAE+SDPTKL+QVLSTTLSRLLKADLVATLKELLRQ+R
Subjt:  MASSLHSTFLKSQISIPIPTSTATAAVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQER

Query:  CALALEVFAVIRSEYRAELGLYAEVAAALSRNGAAEEIDRLVCDLDGRDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRNGWGSMIKGDDYMI
        CALALEVFAV+RSEY  +LG+YAEVAAALSRNGA EEIDRLVCDL+  D VI+   DDKGLIKLIKAVI G+RRESTVRIYRMM+R+GWGS IK DDYM+
Subjt:  CALALEVFAVIRSEYRAELGLYAEVAAALSRNGAAEEIDRLVCDLDGRDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRNGWGSMIKGDDYMI

Query:  KVMSKGLRRVGEIELADEINREFQDLVGS
        +V+SKGLRR+GE+E+ADEIN +FQDLVGS
Subjt:  KVMSKGLRRVGEIELADEINREFQDLVGS

SwissProt top hitse value%identityAlignment
Q1PFH7 Pentatricopeptide repeat-containing protein At1g623501.8e-0526.82Show/hide
Query:  LSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQERCALALEVFAVIRSE--YRAELGLYAEVAAALSRNGAAEEIDRLVCDLDG
        +S E + A + LKR + +   +L + + + +SRLLK+DLV+ L E  RQ +  L ++++ V+R E  YR ++  Y ++   L+RN   +E  ++  DL  
Subjt:  LSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQERCALALEVFAVIRSE--YRAELGLYAEVAAALSRNGAAEEIDRLVCDLDG

Query:  RDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRNGWGSMIKGDDYMIKVMSKGLRRVGEIELADEINREFQDL
         + +     D      L++  +        +R+Y  MR     S  +      +V+ KGL  V   EL +++  +F +L
Subjt:  RDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRNGWGSMIKGDDYMIKVMSKGLRRVGEIELADEINREFQDL

Q9LVW6 Protein THYLAKOID ASSEMBLY 8, chloroplastic6.3e-4349.08Show/hide
Query:  SQISIPIPTSTATAAVAVSFR----VRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTT---LSRLLKADLVATLKELLRQERCALA
        SQ   P  + + T +V V  R    +RCGPRDNRGPL+KGR LS EAIQ+IQSLKRA R+  +     LS T   L RL+K+DL++ L+ELLRQ+ C LA
Subjt:  SQISIPIPTSTATAAVAVSFR----VRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTT---LSRLLKADLVATLKELLRQERCALA

Query:  LEVFAVIRSEY-RAELGLYAEVAAALSRNGAAEEIDRLVCDLDGRDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRNGWGS-MIKGDDYMIKV
        + V + +R+EY   +L LYA++  AL+RN   +EIDRL+ ++DG    I+   DDK L KLI+AV+   RRES VR+Y +MR +GWGS   + D+Y+ +V
Subjt:  LEVFAVIRSEY-RAELGLYAEVAAALSRNGAAEEIDRLVCDLDGRDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRNGWGS-MIKGDDYMIKV

Query:  MSKGLRRVGEIELADEIN
        +SKGL R+GE +LA +++
Subjt:  MSKGLRRVGEIELADEIN

Q9STF9 Protein THYLAKOID ASSEMBLY 8-like, chloroplastic3.6e-0637Show/hide
Query:  RGPLVKGRTL-SIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQERCALALEVFAVIRSE--YRAELGLYAEVAAALSRNGAAEE
        RGPL +G+ L   EA+  I  LKR  + D  KL + + T + RLLK D++A + EL RQE  ALA+++F VI+ +  Y+ ++ +Y ++  +L+++   +E
Subjt:  RGPLVKGRTL-SIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQERCALALEVFAVIRSE--YRAELGLYAEVAAALSRNGAAEE

Arabidopsis top hitse value%identityAlignment
AT1G62350.1 Pentatricopeptide repeat (PPR) superfamily protein1.3e-0626.82Show/hide
Query:  LSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQERCALALEVFAVIRSE--YRAELGLYAEVAAALSRNGAAEEIDRLVCDLDG
        +S E + A + LKR + +   +L + + + +SRLLK+DLV+ L E  RQ +  L ++++ V+R E  YR ++  Y ++   L+RN   +E  ++  DL  
Subjt:  LSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQERCALALEVFAVIRSE--YRAELGLYAEVAAALSRNGAAEEIDRLVCDLDG

Query:  RDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRNGWGSMIKGDDYMIKVMSKGLRRVGEIELADEINREFQDL
         + +     D      L++  +        +R+Y  MR     S  +      +V+ KGL  V   EL +++  +F +L
Subjt:  RDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRNGWGSMIKGDDYMIKVMSKGLRRVGEIELADEINREFQDL

AT3G27750.1 FUNCTIONS IN: molecular_function unknown4.5e-4449.08Show/hide
Query:  SQISIPIPTSTATAAVAVSFR----VRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTT---LSRLLKADLVATLKELLRQERCALA
        SQ   P  + + T +V V  R    +RCGPRDNRGPL+KGR LS EAIQ+IQSLKRA R+  +     LS T   L RL+K+DL++ L+ELLRQ+ C LA
Subjt:  SQISIPIPTSTATAAVAVSFR----VRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTT---LSRLLKADLVATLKELLRQERCALA

Query:  LEVFAVIRSEY-RAELGLYAEVAAALSRNGAAEEIDRLVCDLDGRDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRNGWGS-MIKGDDYMIKV
        + V + +R+EY   +L LYA++  AL+RN   +EIDRL+ ++DG    I+   DDK L KLI+AV+   RRES VR+Y +MR +GWGS   + D+Y+ +V
Subjt:  LEVFAVIRSEY-RAELGLYAEVAAALSRNGAAEEIDRLVCDLDGRDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRNGWGS-MIKGDDYMIKV

Query:  MSKGLRRVGEIELADEIN
        +SKGL R+GE +LA +++
Subjt:  MSKGLRRVGEIELADEIN

AT3G46870.1 Pentatricopeptide repeat (PPR) superfamily protein2.6e-0737Show/hide
Query:  RGPLVKGRTL-SIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQERCALALEVFAVIRSE--YRAELGLYAEVAAALSRNGAAEE
        RGPL +G+ L   EA+  I  LKR  + D  KL + + T + RLLK D++A + EL RQE  ALA+++F VI+ +  Y+ ++ +Y ++  +L+++   +E
Subjt:  RGPLVKGRTL-SIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQERCALALEVFAVIRSE--YRAELGLYAEVAAALSRNGAAEE

AT5G09320.1 Vacuolar sorting protein 9 (VPS9) domain6.1e-1731.73Show/hide
Query:  NRGPLVKGRTLSIEAIQAIQSLKRAE--------------RSDPTKLQQVLSTTLSRLLKADLVATLKELLRQERCALALEVFAVIRSE--YRAELGLYA
        NR PL +GR LSIEAIQA+Q+LKRA                S    L +V+ +   RLLK D+VA L+ELLRQ  C+LAL+VF  IR E  Y+ ++ +Y 
Subjt:  NRGPLVKGRTLSIEAIQAIQSLKRAE--------------RSDPTKLQQVLSTTLSRLLKADLVATLKELLRQERCALALEVFAVIRSE--YRAELGLYA

Query:  EVAAALSRNGAAEEIDRLVCDLDGRDGV---IEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRNGWGSMIKGDDYMIKVMSKGLRRVGEIELADEIN
        ++   ++ N   EE++ L   +    G+   IEW +       L+  +++    +  +  Y  M+  G+    + D    +V+  GL   GE+ L+  + 
Subjt:  EVAAALSRNGAAEEIDRLVCDLDGRDGV---IEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRNGWGSMIKGDDYMIKVMSKGLRRVGEIELADEIN

Query:  REFQDLVG
        ++  +  G
Subjt:  REFQDLVG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTTCTCTTCACTCCACATTTCTCAAATCCCAAATCTCAATTCCGATCCCCACCTCCACCGCTACGGCCGCGGTCGCCGTTTCCTTTCGAGTACGCTGCGGCCC
ACGGGACAACCGAGGACCATTAGTGAAAGGCAGAACCCTAAGCATCGAAGCAATCCAAGCGATTCAATCCCTAAAACGGGCCGAGAGATCCGACCCGACGAAGCTCCAAC
AAGTCCTCTCCACTACACTCTCCCGATTGCTCAAAGCCGACCTCGTCGCCACCTTAAAGGAGCTCCTCCGGCAGGAACGATGCGCCCTAGCCTTGGAGGTTTTCGCCGTA
ATCAGATCAGAGTACCGCGCCGAATTGGGGCTGTACGCGGAGGTGGCGGCGGCGCTGTCGAGGAACGGAGCGGCGGAGGAAATCGACCGACTGGTTTGCGATTTAGACGG
CAGAGATGGAGTAATCGAGTGGGGGGATGACGATAAGGGTTTGATTAAGTTGATTAAGGCGGTGATTAGTGGGAATAGAAGGGAATCGACGGTGAGGATTTATCGAATGA
TGAGGAGGAACGGTTGGGGATCGATGATTAAAGGTGATGATTATATGATTAAGGTTATGAGTAAGGGTTTAAGGAGGGTTGGGGAAATAGAATTAGCTGATGAGATAAAT
AGGGAATTTCAAGACTTAGTGGGGAGTTTATGA
mRNA sequenceShow/hide mRNA sequence
ACAGTCATTGCGAAAAAAAGAAACCCAATCTCCACACCGCCATGGCTTCTTCTCTTCACTCCACATTTCTCAAATCCCAAATCTCAATTCCGATCCCCACCTCCACCGCT
ACGGCCGCGGTCGCCGTTTCCTTTCGAGTACGCTGCGGCCCACGGGACAACCGAGGACCATTAGTGAAAGGCAGAACCCTAAGCATCGAAGCAATCCAAGCGATTCAATC
CCTAAAACGGGCCGAGAGATCCGACCCGACGAAGCTCCAACAAGTCCTCTCCACTACACTCTCCCGATTGCTCAAAGCCGACCTCGTCGCCACCTTAAAGGAGCTCCTCC
GGCAGGAACGATGCGCCCTAGCCTTGGAGGTTTTCGCCGTAATCAGATCAGAGTACCGCGCCGAATTGGGGCTGTACGCGGAGGTGGCGGCGGCGCTGTCGAGGAACGGA
GCGGCGGAGGAAATCGACCGACTGGTTTGCGATTTAGACGGCAGAGATGGAGTAATCGAGTGGGGGGATGACGATAAGGGTTTGATTAAGTTGATTAAGGCGGTGATTAG
TGGGAATAGAAGGGAATCGACGGTGAGGATTTATCGAATGATGAGGAGGAACGGTTGGGGATCGATGATTAAAGGTGATGATTATATGATTAAGGTTATGAGTAAGGGTT
TAAGGAGGGTTGGGGAAATAGAATTAGCTGATGAGATAAATAGGGAATTTCAAGACTTAGTGGGGAGTTTATGAAAATTTTGTATAATGTTTGATTATTACAATTTATTA
TTTCTATTTAGTTTGGATTTATTTTGTTTGTGATGTGAC
Protein sequenceShow/hide protein sequence
MASSLHSTFLKSQISIPIPTSTATAAVAVSFRVRCGPRDNRGPLVKGRTLSIEAIQAIQSLKRAERSDPTKLQQVLSTTLSRLLKADLVATLKELLRQERCALALEVFAV
IRSEYRAELGLYAEVAAALSRNGAAEEIDRLVCDLDGRDGVIEWGDDDKGLIKLIKAVISGNRRESTVRIYRMMRRNGWGSMIKGDDYMIKVMSKGLRRVGEIELADEIN
REFQDLVGSL