; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C024397 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C024397
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionRNA-binding (RRM/RBD/RNP motifs) family protein
Genome locationchr01:35390722..35394067
RNA-Seq ExpressionMELO3C024397
SyntenyMELO3C024397
Gene Ontology termsGO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059439.1 protein WHI4 [Cucumis melo var. makuwa]2.6e-12990.46Show/hide
Query:  MAHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
        MAHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
Subjt:  MAHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI

Query:  ELARSNSRRKHKP-------------------------GGSEPDEPSKKAQQSNEAVVTPASAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
        ELARSNSRRKHKP                         GGSEPDEPSKKAQQSNEAVVTPASAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
Subjt:  ELARSNSRRKHKP-------------------------GGSEPDEPSKKAQQSNEAVVTPASAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL

Query:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS
        CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS
Subjt:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS

XP_004141677.1 protein WHI4 [Cucumis sativus]3.1e-12789.31Show/hide
Query:  MAHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
        MAH PYDPYYLYNQPDPTYS+RSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
Subjt:  MAHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI

Query:  ELARSNSRRKHKP-------------------------GGSEPDEPSKKAQQSNEAVVTPASAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
        ELARSNSRRKHKP                         GGSEPDEPSKKAQQSNEAVVTPA+AISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
Subjt:  ELARSNSRRKHKP-------------------------GGSEPDEPSKKAQQSNEAVVTPASAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL

Query:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS
        CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS
Subjt:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS

XP_008462363.2 PREDICTED: LOW QUALITY PROTEIN: protein WHI4 [Cucumis melo]2.6e-12990.46Show/hide
Query:  MAHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
        MAHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
Subjt:  MAHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI

Query:  ELARSNSRRKHKP-------------------------GGSEPDEPSKKAQQSNEAVVTPASAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
        ELARSNSRRKHKP                         GGSEPDEPSKKAQQSNEAVVTPASAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
Subjt:  ELARSNSRRKHKP-------------------------GGSEPDEPSKKAQQSNEAVVTPASAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL

Query:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS
        CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS
Subjt:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS

XP_023513427.1 U2 small nuclear ribonucleoprotein B'' 2 [Cucurbita pepo subsp. pepo]5.7e-12184.73Show/hide
Query:  MAHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
        MAH PYDPYYLY+QPD  YSDR+NINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
Subjt:  MAHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI

Query:  ELARSNSRRKHKP-------------------------GGSEPDEPSKKAQQSNEAVVTPASAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
        ELARSNSRRKHKP                         GGSEPDEPSKK +QSNEAVV P + +SAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
Subjt:  ELARSNSRRKHKP-------------------------GGSEPDEPSKKAQQSNEAVVTPASAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL

Query:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS
         KYPGFNVLKLRAKSGMPVAFADFE+IEQASKVMEELQGS+LPSSDRGGMHIEYARSKMRKS
Subjt:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS

XP_038898771.1 protein WHI4 isoform X1 [Benincasa hispida]2.0e-12688.17Show/hide
Query:  MAHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
        MAH PYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
Subjt:  MAHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI

Query:  ELARSNSRRKHKP-------------------------GGSEPDEPSKKAQQSNEAVVTPASAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
        ELARSNSRRKHKP                         GGSEPDEPSKKA+QS EA+VTPA+A+SAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
Subjt:  ELARSNSRRKHKP-------------------------GGSEPDEPSKKAQQSNEAVVTPASAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL

Query:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS
        CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS
Subjt:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS

TrEMBL top hitse value%identityAlignment
A0A0A0K772 Uncharacterized protein1.5e-12789.31Show/hide
Query:  MAHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
        MAH PYDPYYLYNQPDPTYS+RSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
Subjt:  MAHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI

Query:  ELARSNSRRKHKP-------------------------GGSEPDEPSKKAQQSNEAVVTPASAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
        ELARSNSRRKHKP                         GGSEPDEPSKKAQQSNEAVVTPA+AISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
Subjt:  ELARSNSRRKHKP-------------------------GGSEPDEPSKKAQQSNEAVVTPASAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL

Query:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS
        CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS
Subjt:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS

A0A1S3CHB2 LOW QUALITY PROTEIN: protein WHI41.2e-12990.46Show/hide
Query:  MAHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
        MAHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
Subjt:  MAHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI

Query:  ELARSNSRRKHKP-------------------------GGSEPDEPSKKAQQSNEAVVTPASAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
        ELARSNSRRKHKP                         GGSEPDEPSKKAQQSNEAVVTPASAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
Subjt:  ELARSNSRRKHKP-------------------------GGSEPDEPSKKAQQSNEAVVTPASAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL

Query:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS
        CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS
Subjt:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS

A0A5A7V0X3 Protein WHI41.2e-12990.46Show/hide
Query:  MAHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
        MAHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
Subjt:  MAHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI

Query:  ELARSNSRRKHKP-------------------------GGSEPDEPSKKAQQSNEAVVTPASAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
        ELARSNSRRKHKP                         GGSEPDEPSKKAQQSNEAVVTPASAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
Subjt:  ELARSNSRRKHKP-------------------------GGSEPDEPSKKAQQSNEAVVTPASAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL

Query:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS
        CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS
Subjt:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS

A0A6J1HI97 protein WHI46.2e-12184.35Show/hide
Query:  MAHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
        MAH PYDPYYLY+QPD  YSDR+NINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
Subjt:  MAHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI

Query:  ELARSNSRRKHKP-------------------------GGSEPDEPSKKAQQSNEAVVTPASAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
        ELARSNSRRKHKP                         GGSEPDEPSKK +QSNEAVV P + +SAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
Subjt:  ELARSNSRRKHKP-------------------------GGSEPDEPSKKAQQSNEAVVTPASAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL

Query:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS
         KYPGFNVLKLRAKSGMPVAFADFE+IEQASKV+EELQGS+LPSSDRGGMHIEYARSKMRKS
Subjt:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS

A0A6J1KI66 U2 small nuclear ribonucleoprotein B'' 22.3e-12084.35Show/hide
Query:  MAHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
        MAH  YDPYYLY+QPD  YSDR+NINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI
Subjt:  MAHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHI

Query:  ELARSNSRRKHKP-------------------------GGSEPDEPSKKAQQSNEAVVTPASAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
        ELARSNSRRKHKP                         GGSEPDEPSKK +QSNEAVV P + +SAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL
Subjt:  ELARSNSRRKHKP-------------------------GGSEPDEPSKKAQQSNEAVVTPASAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVL

Query:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS
         KYPGFNVLKLRAKSGMPVAFADFE+IEQASKVMEELQGS+LPSSDRGGMHIEYARSKMRKS
Subjt:  CKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS

SwissProt top hitse value%identityAlignment
Q6DH13 RNA-binding protein, mRNA-processing factor 2a4.1e-1338.54Show/hide
Query:  NQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIELARSNSR
        ++ + + S    + TLF+SGLP D+K RE++ LFR   G++   +K T +  Q V F TF +   A  A +ALNG++FDP+S   L +E A++N++
Subjt:  NQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIELARSNSR

Q93062 RNA-binding protein with multiple splicing2.0e-1237.5Show/hide
Query:  NQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIELARSNSR
        N P         + TLF+SGLP D+K RE++ LFR   G++   +K T +  Q V F +F +   A  A +ALNG++FDP+    L +E A++N++
Subjt:  NQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIELARSNSR

Q9W6I1 RNA-binding protein with multiple splicing 21.6e-1241.67Show/hide
Query:  INTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIELARSNSR
        + TLF+SGLP D+K RE++ LFR   G++   +K T +  Q V F TF +   A  A +ALNG++FDP++   L +E A++N++
Subjt:  INTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIELARSNSR

Q9WVB0 RNA-binding protein with multiple splicing2.0e-1237.5Show/hide
Query:  NQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIELARSNSR
        N P         + TLF+SGLP D+K RE++ LFR   G++   +K T +  Q V F +F +   A  A +ALNG++FDP+    L +E A++N++
Subjt:  NQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIELARSNSR

Q9YGP5 RNA-binding protein with multiple splicing 24.1e-1342.86Show/hide
Query:  INTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIELARSNSR
        + TLF+SGLP D+K RE++ LFR   G++   +K T +  Q V F TF N   A  A +ALNG++FDP++   L +E A++N++
Subjt:  INTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIELARSNSR

Arabidopsis top hitse value%identityAlignment
AT2G42240.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.9e-3837.93Show/hide
Query:  AHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIE
        AH  Y P ++      +   R  + TLF++GLP+DVK REI+NLFR  PG+++  L+ +  G +  AFA F + QSAV  +HALNG+ FD +  S LHI+
Subjt:  AHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIE

Query:  LARSNSRRKH--------------------KPGGSEPDEPSKKAQQSNEAVVTPAS-------AISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEV
        LA+SN + K                     + G      P   +   N    +PA        A  AP          PC TLFIAN+GPNC E EL +V
Subjt:  LARSNSRRKH--------------------KPGGSEPDEPSKKAQQSNEAVVTPAS-------AISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEV

Query:  LCKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGG-MHIEYARSKM
          +  GF  LK++   G PVAF DF+D+  +S+ +  LQG+VL SS  G  + ++YARS+M
Subjt:  LCKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGG-MHIEYARSKM

AT2G42240.2 RNA-binding (RRM/RBD/RNP motifs) family protein7.9e-3637.75Show/hide
Query:  AHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIE
        AH  Y P ++      +   R  + TLF++GLP+DVK REI+NLFR  PG+++  L+ +  G +  AFA F + QSAV  +HALNG+ FD +  S LHI+
Subjt:  AHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIE

Query:  LARSNSRRKH--------------------KPGGSEPDEPSKKAQQSNEAVVTPAS-------AISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEV
        LA+SN + K                     + G      P   +   N    +PA        A  AP          PC TLFIAN+GPNC E EL +V
Subjt:  LARSNSRRKH--------------------KPGGSEPDEPSKKAQQSNEAVVTPAS-------AISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEV

Query:  LCKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRG
          +  GF  LK++   G PVAF DF+D+  +S+ +  LQG+VL SS  G
Subjt:  LCKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRG

AT2G42240.3 RNA-binding (RRM/RBD/RNP motifs) family protein1.6e-3637.4Show/hide
Query:  AHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIE
        AH  Y P ++      +   R  + TLF++GLP+DVK REI+NLFR  PG+++  L+ +  G +  AFA F + QSAV  +HALNG+ FD +  S LHI+
Subjt:  AHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIE

Query:  LARSNSRRKH--------------------KPGGSEPDEPSKKAQQSNEAVVTPAS-------AISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEV
        LA+SN + K                     + G      P   +   N    +PA        A  AP          PC TLFIAN+GPNC E EL +V
Subjt:  LARSNSRRKH--------------------KPGGSEPDEPSKKAQQSNEAVVTPAS-------AISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEV

Query:  LCKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRK
          +  GF  LK++   G PVAF DF+D+  +S+ +  LQG+VL SS  G +    +R  MRK
Subjt:  LCKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRK

AT3G13700.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.2e-6951.88Show/hide
Query:  HHPYDPYYLY---NQPD------PTYSDRSN-INTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQ------------------VVAFATFYN
        H PYDP+Y+Y   + P       P  +D    INTLF+SGLP+DVKAREIHNLFRRR GF+SCQLKYTGRG+Q                  VVAFATF +
Subjt:  HHPYDPYYLY---NQPD------PTYSDRSN-INTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQ------------------VVAFATFYN

Query:  HQSAVTALHALNGVKFDPQSGSVLHIELARSNSRRKHKPGG-------------------------SEPDE---------PSKKAQQSNEAVVTPASAIS
        H+ A+ A++ LNGVKFDPQ+GS LHIELARSNSRRK +PG                          S+PDE         P +     +EA   P S   
Subjt:  HQSAVTALHALNGVKFDPQSGSVLHIELARSNSRRKHKPGG-------------------------SEPDE---------PSKKAQQSNEAVVTPASAIS

Query:  APYEHHEK-NDGG----PCSTLFIANLGPNCNEDELKEVLCKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIE
        +   H EK ++GG     CSTLFIANLGPNC EDELK++L +YPGF++LK+RA+ GMPVAFADFE+IEQA+  M  LQG++L SSDRGGMHIE
Subjt:  APYEHHEK-NDGG----PCSTLFIANLGPNCNEDELKEVLCKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIE

AT3G13700.2 RNA-binding (RRM/RBD/RNP motifs) family protein4.1e-7756.54Show/hide
Query:  HHPYDPYYLY---NQPD------PTYSDRSN-INTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDP
        H PYDP+Y+Y   + P       P  +D    INTLF+SGLP+DVKAREIHNLFRRR GF+SCQLKYTGRG+QVVAFATF +H+ A+ A++ LNGVKFDP
Subjt:  HHPYDPYYLY---NQPD------PTYSDRSN-INTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDP

Query:  QSGSVLHIELARSNSRRKHKPGG-------------------------SEPDE---------PSKKAQQSNEAVVTPASAISAPYEHHEK-NDGG----P
        Q+GS LHIELARSNSRRK +PG                          S+PDE         P +     +EA   P S   +   H EK ++GG     
Subjt:  QSGSVLHIELARSNSRRKHKPGG-------------------------SEPDE---------PSKKAQQSNEAVVTPASAISAPYEHHEK-NDGG----P

Query:  CSTLFIANLGPNCNEDELKEVLCKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRK
        CSTLFIANLGPNC EDELK++L +YPGF++LK+RA+ GMPVAFADFE+IEQA+  M  LQG++L SSDRGGMHIEYARSKMRK
Subjt:  CSTLFIANLGPNCNEDELKEVLCKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSSDRGGMHIEYARSKMRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCACCATCCTTACGATCCTTACTATCTCTATAATCAACCGGACCCGACCTACAGTGACCGGAGCAACATCAACACGCTATTCATCTCTGGTCTCCCTGACGACGT
CAAGGCGCGCGAGATTCACAACCTTTTCCGCCGTCGCCCGGGGTTCGACTCTTGCCAGCTCAAGTACACTGGACGAGGCAATCAGGTTGTGGCATTTGCCACTTTTTACA
ATCACCAATCGGCTGTGACAGCGCTTCATGCATTAAATGGTGTCAAATTTGATCCACAAAGTGGATCGGTTCTGCATATTGAACTTGCTAGGTCAAACTCAAGGAGAAAA
CATAAGCCAGGAGGCAGTGAACCGGATGAACCATCAAAAAAGGCCCAACAAAGCAACGAGGCAGTGGTTACTCCTGCTAGTGCTATATCTGCTCCATATGAGCATCATGA
AAAGAATGATGGAGGACCATGCTCCACTTTGTTTATCGCAAATCTGGGTCCAAACTGCAATGAAGATGAACTGAAGGAAGTCTTGTGCAAATATCCTGGATTCAACGTTC
TCAAATTGCGTGCCAAAAGTGGAATGCCCGTTGCATTTGCTGATTTTGAGGACATCGAACAAGCTAGCAAGGTTATGGAGGAGCTTCAGGGCAGTGTTCTACCATCATCC
GACCGTGGCGGCATGCATATAGAGTATGCTCGGTCTAAAATGAGGAAGTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTCACCATCCTTACGATCCTTACTATCTCTATAATCAACCGGACCCGACCTACAGTGACCGGAGCAACATCAACACGCTATTCATCTCTGGTCTCCCTGACGACGT
CAAGGCGCGCGAGATTCACAACCTTTTCCGCCGTCGCCCGGGGTTCGACTCTTGCCAGCTCAAGTACACTGGACGAGGCAATCAGGTTGTGGCATTTGCCACTTTTTACA
ATCACCAATCGGCTGTGACAGCGCTTCATGCATTAAATGGTGTCAAATTTGATCCACAAAGTGGATCGGTTCTGCATATTGAACTTGCTAGGTCAAACTCAAGGAGAAAA
CATAAGCCAGGAGGCAGTGAACCGGATGAACCATCAAAAAAGGCCCAACAAAGCAACGAGGCAGTGGTTACTCCTGCTAGTGCTATATCTGCTCCATATGAGCATCATGA
AAAGAATGATGGAGGACCATGCTCCACTTTGTTTATCGCAAATCTGGGTCCAAACTGCAATGAAGATGAACTGAAGGAAGTCTTGTGCAAATATCCTGGATTCAACGTTC
TCAAATTGCGTGCCAAAAGTGGAATGCCCGTTGCATTTGCTGATTTTGAGGACATCGAACAAGCTAGCAAGGTTATGGAGGAGCTTCAGGGCAGTGTTCTACCATCATCC
GACCGTGGCGGCATGCATATAGAGTATGCTCGGTCTAAAATGAGGAAGTCTTAG
Protein sequenceShow/hide protein sequence
MAHHPYDPYYLYNQPDPTYSDRSNINTLFISGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRGNQVVAFATFYNHQSAVTALHALNGVKFDPQSGSVLHIELARSNSRRK
HKPGGSEPDEPSKKAQQSNEAVVTPASAISAPYEHHEKNDGGPCSTLFIANLGPNCNEDELKEVLCKYPGFNVLKLRAKSGMPVAFADFEDIEQASKVMEELQGSVLPSS
DRGGMHIEYARSKMRKS