; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C024450 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C024450
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionNuclear pore complex protein NUP35
Genome locationchr01:35759363..35762469
RNA-Seq ExpressionMELO3C024450
SyntenyMELO3C024450
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0006607 - NLS-bearing protein import into nucleus (biological process)
GO:0006999 - nuclear pore organization (biological process)
GO:0051028 - mRNA transport (biological process)
GO:0031965 - nuclear membrane (cellular component)
GO:0044613 - nuclear pore central transport channel (cellular component)
GO:0044615 - nuclear pore nuclear basket (cellular component)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0005543 - phospholipid binding (molecular function)
GO:0017056 - structural constituent of nuclear pore (molecular function)
InterPro domainsIPR007846 - RNA-recognition motif (RRM) Nup35-type domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR017389 - Nucleoporin, NUP53
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051033.1 nuclear pore complex protein NUP35 [Cucumis melo var. makuwa]6.4e-18799.7Show/hide
Query:  MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSS
        MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSS
Subjt:  MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSS

Query:  PTKNKSNASTSYTPINGQPSRQGSAGFSWWSTSKGGGSEREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLAKLNEEEWVTVYGFSPADTNL
        PTKNKSNASTSYTPINGQPSRQGSAGFSWWSTSKGGGSEREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLAKLNEEEWVTVYGFSPADTNL
Subjt:  PTKNKSNASTSYTPINGQPSRQGSAGFSWWSTSKGGGSEREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLAKLNEEEWVTVYGFSPADTNL

Query:  VLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNKNGIQINGVLIVGVKPVDPMHRQALDEKLNNPGFMVIPPVSSRTSELLATRGPMLPYSLQN
        VLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNKNGIQINGVLIVGVKPVDPMHRQALDEKLNNPGFMVIPPVSSRTSELLATRGPM PYSLQN
Subjt:  VLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNKNGIQINGVLIVGVKPVDPMHRQALDEKLNNPGFMVIPPVSSRTSELLATRGPMLPYSLQN

Query:  GNTSARHSGGAIASPSKSLVSKVMDLMFGV
        GNTSARHSGGAIASPSKSLVSKVMDLMFGV
Subjt:  GNTSARHSGGAIASPSKSLVSKVMDLMFGV

XP_004141656.1 nuclear pore complex protein NUP35 [Cucumis sativus]1.6e-18297.27Show/hide
Query:  MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSS
        MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSS
Subjt:  MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSS

Query:  PTKNKSNASTSYTPINGQPSRQGSAGFSWWSTSKGGGSEREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLAKLNEEEWVTVYGFSPADTNL
        PTKNKSNASTSYTPI+GQ SRQGSAGFSWWSTSKGGGSE+EDKGKSSPVEGVIQPGALITLPTPREVARPEV+RNCLPLAKLNEEEWVTVYGFSPADTNL
Subjt:  PTKNKSNASTSYTPINGQPSRQGSAGFSWWSTSKGGGSEREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLAKLNEEEWVTVYGFSPADTNL

Query:  VLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNKNGIQINGVLIVGVKPVDPMHRQALDEKLNNPGFMVIPPVSSRTSELLATRGPMLPYSLQN
        VLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNKNGIQINGVLIVGVKPVDPMHRQAL+E+LNNPGFMVIPPVSSRTSELLATRGPM PY+LQN
Subjt:  VLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNKNGIQINGVLIVGVKPVDPMHRQALDEKLNNPGFMVIPPVSSRTSELLATRGPMLPYSLQN

Query:  GNTSARHSGGAIASPSKSLVSKVMDLMFGV
        G TSARHSGGAIASPSKSLVSKVMDLMFGV
Subjt:  GNTSARHSGGAIASPSKSLVSKVMDLMFGV

XP_008462444.1 PREDICTED: nuclear pore complex protein NUP35 [Cucumis melo]1.3e-187100Show/hide
Query:  MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSS
        MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSS
Subjt:  MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSS

Query:  PTKNKSNASTSYTPINGQPSRQGSAGFSWWSTSKGGGSEREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLAKLNEEEWVTVYGFSPADTNL
        PTKNKSNASTSYTPINGQPSRQGSAGFSWWSTSKGGGSEREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLAKLNEEEWVTVYGFSPADTNL
Subjt:  PTKNKSNASTSYTPINGQPSRQGSAGFSWWSTSKGGGSEREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLAKLNEEEWVTVYGFSPADTNL

Query:  VLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNKNGIQINGVLIVGVKPVDPMHRQALDEKLNNPGFMVIPPVSSRTSELLATRGPMLPYSLQN
        VLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNKNGIQINGVLIVGVKPVDPMHRQALDEKLNNPGFMVIPPVSSRTSELLATRGPMLPYSLQN
Subjt:  VLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNKNGIQINGVLIVGVKPVDPMHRQALDEKLNNPGFMVIPPVSSRTSELLATRGPMLPYSLQN

Query:  GNTSARHSGGAIASPSKSLVSKVMDLMFGV
        GNTSARHSGGAIASPSKSLVSKVMDLMFGV
Subjt:  GNTSARHSGGAIASPSKSLVSKVMDLMFGV

XP_022151212.1 nuclear pore complex protein NUP35 [Momordica charantia]1.5e-16788.79Show/hide
Query:  MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSS
        MNTT+HRTPNSG +S+FYQDLASPVT+RKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDR  SDFSPESGIPDYP+SPE KSDPRTPI+ HDFSS
Subjt:  MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSS

Query:  PTKNKSNASTSYTPINGQPSRQGSAGFSWWSTSKGGGSEREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLAKLNEEEWVTVYGFSPADTNL
        P KNKSNASTSYTP +GQ SRQGSAGFSWWSTSKGGGSE+EDKGKSSPVEG +QPGALI LPTPREVARPEV+RNC P  KLNEEEWVTVYGFSPADTNL
Subjt:  PTKNKSNASTSYTPINGQPSRQGSAGFSWWSTSKGGGSEREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLAKLNEEEWVTVYGFSPADTNL

Query:  VLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNKNGIQINGVLIVGVKPVDPMHRQALDEKLNNPGFMVIPPVSSRTSELLATRGPMLPYSLQN
        VLREFEKCGEILKH+PGPRDANWMHILYQNRSDA KALNKNG+QINGVLIVGVKPVDPMHRQALDEK+NNPGFMVIPPV SRT+ELLATRGP+  Y+LQN
Subjt:  VLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNKNGIQINGVLIVGVKPVDPMHRQALDEKLNNPGFMVIPPVSSRTSELLATRGPMLPYSLQN

Query:  GNTSARHSGGAIASPSKSLVSKVMDLMFGV
        GN++AR SGG IASPSKSLVSKVMDLMFGV
Subjt:  GNTSARHSGGAIASPSKSLVSKVMDLMFGV

XP_038900103.1 nuclear pore complex protein NUP35 [Benincasa hispida]9.9e-17292.12Show/hide
Query:  MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSS
        MNT VHRTPNSG +SLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRS SDFSPESGI DYPVSPE KSDPRTPI+ HDFSS
Subjt:  MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSS

Query:  PTKNKSNASTSYTPINGQPSRQGSAGFSWWSTSKGGGSEREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLAKLNEEEWVTVYGFSPADTNL
        P KNKSNASTSYTPI+GQ SRQGSAGFSWWSTSKGGGSE+EDKGKSSPVEGVIQPGALITLPTPREVARPEV+RNCLP AKLNEEEWVTVYGFSPADTNL
Subjt:  PTKNKSNASTSYTPINGQPSRQGSAGFSWWSTSKGGGSEREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLAKLNEEEWVTVYGFSPADTNL

Query:  VLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNKNGIQINGVLIVGVKPVDPMHRQALDEKLNNPGFMVIPPVSSRTSELLATRGPMLPYSLQN
        VLREFEKCGEILKH+PGPRDANWMHILYQNRSDA +ALNKNGIQINGVLIVGVKPVDPMHRQALDEKLN+PGFMV PPVSSRTSELLATRG + PY+LQN
Subjt:  VLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNKNGIQINGVLIVGVKPVDPMHRQALDEKLNNPGFMVIPPVSSRTSELLATRGPMLPYSLQN

Query:  GNTSARHSGGAIASPSKSLVSKVMDLMFGV
        GN+SAR SGG IASPSKSLVSKVMDLMFGV
Subjt:  GNTSARHSGGAIASPSKSLVSKVMDLMFGV

TrEMBL top hitse value%identityAlignment
A0A0A0K7B2 Nuclear pore complex protein NUP357.9e-18397.27Show/hide
Query:  MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSS
        MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSS
Subjt:  MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSS

Query:  PTKNKSNASTSYTPINGQPSRQGSAGFSWWSTSKGGGSEREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLAKLNEEEWVTVYGFSPADTNL
        PTKNKSNASTSYTPI+GQ SRQGSAGFSWWSTSKGGGSE+EDKGKSSPVEGVIQPGALITLPTPREVARPEV+RNCLPLAKLNEEEWVTVYGFSPADTNL
Subjt:  PTKNKSNASTSYTPINGQPSRQGSAGFSWWSTSKGGGSEREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLAKLNEEEWVTVYGFSPADTNL

Query:  VLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNKNGIQINGVLIVGVKPVDPMHRQALDEKLNNPGFMVIPPVSSRTSELLATRGPMLPYSLQN
        VLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNKNGIQINGVLIVGVKPVDPMHRQAL+E+LNNPGFMVIPPVSSRTSELLATRGPM PY+LQN
Subjt:  VLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNKNGIQINGVLIVGVKPVDPMHRQALDEKLNNPGFMVIPPVSSRTSELLATRGPMLPYSLQN

Query:  GNTSARHSGGAIASPSKSLVSKVMDLMFGV
        G TSARHSGGAIASPSKSLVSKVMDLMFGV
Subjt:  GNTSARHSGGAIASPSKSLVSKVMDLMFGV

A0A1S3CH09 Nuclear pore complex protein NUP356.2e-188100Show/hide
Query:  MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSS
        MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSS
Subjt:  MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSS

Query:  PTKNKSNASTSYTPINGQPSRQGSAGFSWWSTSKGGGSEREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLAKLNEEEWVTVYGFSPADTNL
        PTKNKSNASTSYTPINGQPSRQGSAGFSWWSTSKGGGSEREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLAKLNEEEWVTVYGFSPADTNL
Subjt:  PTKNKSNASTSYTPINGQPSRQGSAGFSWWSTSKGGGSEREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLAKLNEEEWVTVYGFSPADTNL

Query:  VLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNKNGIQINGVLIVGVKPVDPMHRQALDEKLNNPGFMVIPPVSSRTSELLATRGPMLPYSLQN
        VLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNKNGIQINGVLIVGVKPVDPMHRQALDEKLNNPGFMVIPPVSSRTSELLATRGPMLPYSLQN
Subjt:  VLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNKNGIQINGVLIVGVKPVDPMHRQALDEKLNNPGFMVIPPVSSRTSELLATRGPMLPYSLQN

Query:  GNTSARHSGGAIASPSKSLVSKVMDLMFGV
        GNTSARHSGGAIASPSKSLVSKVMDLMFGV
Subjt:  GNTSARHSGGAIASPSKSLVSKVMDLMFGV

A0A5A7U592 Nuclear pore complex protein NUP353.1e-18799.7Show/hide
Query:  MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSS
        MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSS
Subjt:  MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSS

Query:  PTKNKSNASTSYTPINGQPSRQGSAGFSWWSTSKGGGSEREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLAKLNEEEWVTVYGFSPADTNL
        PTKNKSNASTSYTPINGQPSRQGSAGFSWWSTSKGGGSEREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLAKLNEEEWVTVYGFSPADTNL
Subjt:  PTKNKSNASTSYTPINGQPSRQGSAGFSWWSTSKGGGSEREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLAKLNEEEWVTVYGFSPADTNL

Query:  VLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNKNGIQINGVLIVGVKPVDPMHRQALDEKLNNPGFMVIPPVSSRTSELLATRGPMLPYSLQN
        VLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNKNGIQINGVLIVGVKPVDPMHRQALDEKLNNPGFMVIPPVSSRTSELLATRGPM PYSLQN
Subjt:  VLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNKNGIQINGVLIVGVKPVDPMHRQALDEKLNNPGFMVIPPVSSRTSELLATRGPMLPYSLQN

Query:  GNTSARHSGGAIASPSKSLVSKVMDLMFGV
        GNTSARHSGGAIASPSKSLVSKVMDLMFGV
Subjt:  GNTSARHSGGAIASPSKSLVSKVMDLMFGV

A0A6J1DCV4 Nuclear pore complex protein NUP357.2e-16888.79Show/hide
Query:  MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSS
        MNTT+HRTPNSG +S+FYQDLASPVT+RKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDR  SDFSPESGIPDYP+SPE KSDPRTPI+ HDFSS
Subjt:  MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSS

Query:  PTKNKSNASTSYTPINGQPSRQGSAGFSWWSTSKGGGSEREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLAKLNEEEWVTVYGFSPADTNL
        P KNKSNASTSYTP +GQ SRQGSAGFSWWSTSKGGGSE+EDKGKSSPVEG +QPGALI LPTPREVARPEV+RNC P  KLNEEEWVTVYGFSPADTNL
Subjt:  PTKNKSNASTSYTPINGQPSRQGSAGFSWWSTSKGGGSEREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLAKLNEEEWVTVYGFSPADTNL

Query:  VLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNKNGIQINGVLIVGVKPVDPMHRQALDEKLNNPGFMVIPPVSSRTSELLATRGPMLPYSLQN
        VLREFEKCGEILKH+PGPRDANWMHILYQNRSDA KALNKNG+QINGVLIVGVKPVDPMHRQALDEK+NNPGFMVIPPV SRT+ELLATRGP+  Y+LQN
Subjt:  VLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNKNGIQINGVLIVGVKPVDPMHRQALDEKLNNPGFMVIPPVSSRTSELLATRGPMLPYSLQN

Query:  GNTSARHSGGAIASPSKSLVSKVMDLMFGV
        GN++AR SGG IASPSKSLVSKVMDLMFGV
Subjt:  GNTSARHSGGAIASPSKSLVSKVMDLMFGV

A0A6J1JYW9 Nuclear pore complex protein NUP351.2e-15985.8Show/hide
Query:  MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSS
        MNTTVHRT NSG +SLFYQDLASPV+TR+GKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRS SDFSPESGIPDYPVSPE KSDP TPI+ HDFSS
Subjt:  MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSS

Query:  PTKNKSNASTSYTPINGQPSRQGSAGFSWWSTSKGGGSEREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLAKLNEEEWVTVYGFSPADTNL
        P K+KSNASTS+TPI+ Q SRQ SAGFSWWST KGGGSE+EDKGKSSPVEGVIQPGALITL TPREVARPEV+RNCLP  KLNEEEWVTVYGFSPADTNL
Subjt:  PTKNKSNASTSYTPINGQPSRQGSAGFSWWSTSKGGGSEREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLAKLNEEEWVTVYGFSPADTNL

Query:  VLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNKNGIQINGVLIVGVKPVDPMHRQALDEKLNNPGFMVIPPVSSRTSELLATRGPMLPYSLQN
        VLREFEKCGEILKH+PGPRDANWMHILY+NRS A KAL+KNGIQING+LIVGVKPVDP+ RQ LDEKLNNPGFMV+PPVSSRT+EL    GP+ PY+ QN
Subjt:  VLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNKNGIQINGVLIVGVKPVDPMHRQALDEKLNNPGFMVIPPVSSRTSELLATRGPMLPYSLQN

Query:  GNTSARHSGG-AIASPSKSLVSKVMDLMFGV
        GN+ AR SGG  IASPSKSLVSKVMDLMFGV
Subjt:  GNTSARHSGG-AIASPSKSLVSKVMDLMFGV

SwissProt top hitse value%identityAlignment
O04326 Nuclear pore complex protein NUP355.9e-11966.47Show/hide
Query:  MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRR--HDF
        M+   HRTP SG +SL +QDLASPV+ R+GKFS+PGQAAAVSALWRENFG SDLPPPP++TL+DR  SDFSPESGI DY  SP+ KSD RTP +    + 
Subjt:  MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRR--HDF

Query:  SSPTKNKSNASTSYTPINGQPSRQGSAGFSWWSTSKGGGS-EREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLAKLNEEEWVTVYGFSPAD
         +P K K  AS S++ +N Q S+Q S   SWWS SK G S E++DKGK SPVEGV+QPGAL+TLP PREVARPEV+R  +P   L+EEEWVTVYGFSP D
Subjt:  SSPTKNKSNASTSYTPINGQPSRQGSAGFSWWSTSKGGGS-EREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLAKLNEEEWVTVYGFSPAD

Query:  TNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNKNGIQINGVLIVGVKPVDPMHRQALDEKLNNPGFMVIPPVSSRTSELLATRGPMLPYS
        TNLVLREFEKCG +LKH+PGPR+ANWMHILYQNRSDA KALNK G+ INGV+IVGVKPVDP+ +QAL+E+LNN GFM +PP SS  +     R    P  
Subjt:  TNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNKNGIQINGVLIVGVKPVDPMHRQALDEKLNNPGFMVIPPVSSRTSELLATRGPMLPYS

Query:  LQNGNT-SARHSGGAIASPSKSLVSKVMDLMFGV
        LQNG+  S + SGGA+ASPSKS+VSK  DLMFGV
Subjt:  LQNGNT-SARHSGGAIASPSKSLVSKVMDLMFGV

Q66IJ0 Nucleoporin NUP352.0e-1326.98Show/hide
Query:  PNSGSRSL---FYQDLASPVTTRKGKFSTPGQAAAVSAL-WRENFGNSDLPPPPVF-TLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTK
        P++G++ L      D+ +PV        TP Q  ++  +  R    +   PP PV  T +D+S +   P   I D   SP   S P  P +   F     
Subjt:  PNSGSRSL---FYQDLASPVTTRKGKFSTPGQAAAVSAL-WRENFGNSDLPPPPVF-TLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTK

Query:  NKSNASTSYTPINGQ-PSRQGSAGFSWWSTSKGGGSEREDKGKSSPVEGVIQPGAL----ITLPTPREVARPEVERNCLPLAKLNEEEWVTVYGFSPADT
             S  +TP++G  PS       S        GS +       P   V  P  +     T  +P ++     + + L      ++ WVTV+GF  A  
Subjt:  NKSNASTSYTPINGQ-PSRQGSAGFSWWSTSKGGGSEREDKGKSSPVEGVIQPGAL----ITLPTPREVARPEVERNCLPLAKLNEEEWVTVYGFSPADT

Query:  NLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNKNGIQINGVLIVGVKPVDPMHRQALDEKLNNP--GFMVIPPV---SSRTSELLATRGPM
        + +L +F + G I+KH+    + NWMHI YQ++  A+KAL+K+G      +++GVKP          EK++ P    +  PPV    + T  +   R   
Subjt:  NLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNKNGIQINGVLIVGVKPVDPMHRQALDEKLNNP--GFMVIPPV---SSRTSELLATRGPM

Query:  LPYSLQNGNTSARHSGGAIA---SPSK--SLVSKVMDLMFG
        +        T A      +A   +P K  S+VSK M+ MFG
Subjt:  LPYSLQNGNTSARHSGGAIA---SPSK--SLVSKVMDLMFG

Q68FY1 Nucleoporin NUP351.4e-1125.5Show/hide
Query:  RTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSVSDFSP----------ESGIPDYPVSPETKSDPRTPIRR-
        + P  GS  +    L SP + + G           +A +   F   DLP P   T + RS+S  S             G P  PV P  K     P  R 
Subjt:  RTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSVSDFSP----------ESGIPDYPVSPETKSDPRTPIRR-

Query:  --HDFSS--------PTKNKSNASTSYTPINGQPSRQGSAGFSWWSTSKGGGSEREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLAKLNEE
           D SS        P++ ++N S   +P+ G             +T   G S         P +  + P  L    T  +    E            ++
Subjt:  --HDFSS--------PTKNKSNASTSYTPINGQPSRQGSAGFSWWSTSKGGGSEREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLAKLNEE

Query:  EWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNKNGIQINGVLIVGVKP-VDPMHRQALDE-KLNNPGFMVIPPVSS--
         WVTV+GF  A  + +L +F + G ILKH+      NWMHI YQ++  A+KAL+K+G      +++GVKP +D    +  D   L++P     PP+ +  
Subjt:  EWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNKNGIQINGVLIVGVKP-VDPMHRQALDE-KLNNPGFMVIPPVSS--

Query:  -----RTSELLATRGPMLPYSLQNGNTSARHSGGAIASPSKSLVSKVMDLMFG
              ++  ++T  P+      + +     S        +SLVS+ M+ MFG
Subjt:  -----RTSELLATRGPMLPYSLQNGNTSARHSGGAIASPSKSLVSKVMDLMFG

Q6P6X9 Nucleoporin NUP351.2e-1533.99Show/hide
Query:  EEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNKNGIQINGVLIVGVKP-VDPMHRQALDEKLNNPGFMVIPPVS--
        ++ W+TV+GF PA  + +L +F + G ILKH+      NWMH+ YQ++  A+KAL+K+G      +++GVKP +D    ++LD K +    +  PPV   
Subjt:  EEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNKNGIQINGVLIVGVKP-VDPMHRQALDEKLNNPGFMVIPPVS--

Query:  -SRTSELLATRGPMLPYSLQNGNTSARH---SGGAIASPSKSLVSKVMDLMFG
         + +  L   R  M P S     +S+ +   S        +S VSK M+ MFG
Subjt:  -SRTSELLATRGPMLPYSLQNGNTSARH---SGGAIASPSKSLVSKVMDLMFG

Q8NFH5 Nucleoporin NUP354.0e-1427.14Show/hide
Query:  LASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSVSDFSP----------ESGIPDYPVSPETKSDPRTPIRR---HDFSSP------
        L SP + + G          V+A +   F   DLP P   T + RS+S  S             G P  PV P  K     P  R    D SSP      
Subjt:  LASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSVSDFSP----------ESGIPDYPVSPETKSDPRTPIRR---HDFSSP------

Query:  --TKNKSNASTSYTPINGQPSRQGSAGFSWWSTSKGGGSEREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLAKLNEEEWVTVYGFSPADTN
          ++ + N S   +P+ G  S  G+ G S +S +  G           P +  + P  L    T  +    E            ++ WVTV+GF  A  +
Subjt:  --TKNKSNASTSYTPINGQPSRQGSAGFSWWSTSKGGGSEREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLAKLNEEEWVTVYGFSPADTN

Query:  LVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNKNGIQINGVLIVGVKP-VDPMHRQALDE-KLNNPGFMVIPPVSS-------RTSELLATR
         +L +F + G ILKH+      NWMHI YQ++  A+KAL+K+G      +++GVKP +D    ++ D   L++P     PP+ +        ++  ++T 
Subjt:  LVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNKNGIQINGVLIVGVKP-VDPMHRQALDE-KLNNPGFMVIPPVSS-------RTSELLATR

Query:  GPMLPYSLQNGNTSARHSGGAIASPSKSLVSKVMDLMFG
         P+      + +     S        +SLVSK M+ MFG
Subjt:  GPMLPYSLQNGNTSARHSGGAIASPSKSLVSKVMDLMFG

Arabidopsis top hitse value%identityAlignment
AT3G16310.1 mitotic phosphoprotein N' end (MPPN) family protein4.2e-12066.47Show/hide
Query:  MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRR--HDF
        M+   HRTP SG +SL +QDLASPV+ R+GKFS+PGQAAAVSALWRENFG SDLPPPP++TL+DR  SDFSPESGI DY  SP+ KSD RTP +    + 
Subjt:  MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRR--HDF

Query:  SSPTKNKSNASTSYTPINGQPSRQGSAGFSWWSTSKGGGS-EREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLAKLNEEEWVTVYGFSPAD
         +P K K  AS S++ +N Q S+Q S   SWWS SK G S E++DKGK SPVEGV+QPGAL+TLP PREVARPEV+R  +P   L+EEEWVTVYGFSP D
Subjt:  SSPTKNKSNASTSYTPINGQPSRQGSAGFSWWSTSKGGGS-EREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLAKLNEEEWVTVYGFSPAD

Query:  TNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNKNGIQINGVLIVGVKPVDPMHRQALDEKLNNPGFMVIPPVSSRTSELLATRGPMLPYS
        TNLVLREFEKCG +LKH+PGPR+ANWMHILYQNRSDA KALNK G+ INGV+IVGVKPVDP+ +QAL+E+LNN GFM +PP SS  +     R    P  
Subjt:  TNLVLREFEKCGEILKHLPGPRDANWMHILYQNRSDAQKALNKNGIQINGVLIVGVKPVDPMHRQALDEKLNNPGFMVIPPVSSRTSELLATRGPMLPYS

Query:  LQNGNT-SARHSGGAIASPSKSLVSKVMDLMFGV
        LQNG+  S + SGGA+ASPSKS+VSK  DLMFGV
Subjt:  LQNGNT-SARHSGGAIASPSKSLVSKVMDLMFGV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATACCACTGTGCATAGAACTCCCAACTCCGGGAGCCGTTCATTGTTCTACCAAGATTTAGCATCTCCTGTTACGACACGGAAAGGAAAATTTTCAACTCCAGGCCA
GGCAGCTGCTGTTTCTGCTTTATGGCGGGAGAATTTTGGAAACTCAGATCTTCCTCCTCCTCCGGTTTTCACTTTGGAAGACCGCTCGGTTTCAGATTTTTCTCCCGAAT
CTGGGATTCCTGATTATCCTGTTTCCCCAGAAACTAAATCAGACCCCAGGACCCCTATCCGAAGGCATGACTTCTCTTCGCCGACGAAAAACAAGTCAAATGCCAGCACT
TCTTATACACCAATCAATGGACAACCAAGCCGGCAGGGATCGGCTGGCTTTAGTTGGTGGTCAACATCGAAAGGTGGTGGGAGCGAGCGAGAAGATAAGGGAAAAAGTTC
ACCAGTCGAAGGTGTGATTCAACCTGGTGCATTAATCACACTTCCAACCCCGAGGGAAGTTGCCAGACCGGAGGTGGAAAGAAATTGCTTGCCTTTAGCAAAACTGAATG
AGGAGGAATGGGTTACTGTCTATGGATTTTCCCCTGCTGATACAAATCTAGTTTTGAGGGAGTTTGAGAAATGCGGTGAGATCTTGAAACACCTTCCTGGTCCAAGAGAT
GCTAATTGGATGCACATTCTTTATCAGAACCGATCTGATGCCCAGAAGGCTCTCAATAAAAATGGTATTCAAATTAATGGGGTGCTAATTGTTGGTGTGAAACCAGTGGA
CCCAATGCATCGGCAGGCACTAGATGAAAAATTAAACAATCCGGGATTCATGGTTATCCCACCGGTATCTTCTCGAACCTCAGAACTCCTTGCAACGAGAGGACCCATGC
TTCCCTACAGTCTTCAAAATGGTAACACTAGTGCACGGCACTCAGGAGGTGCCATCGCTTCACCATCAAAATCATTAGTATCTAAGGTGATGGATTTGATGTTTGGAGTC
TAA
mRNA sequenceShow/hide mRNA sequence
CGTATTCCCCACTAGAGGGAGTTGGGGTTTAGGGTTTCGAACTTTCAACTTCAACTTCCAAAACTTTTTTTAGGTCTTTTGTCGTCCCATTTGGGCGTCTCTATTCCAAA
ATACTTTGGGGAGGGAAAAATCAAATTCCCAAGTCCCCTCGCCTCTCTAATTCTCTGATCCAATCGATCAGTTCGAAGCAGAGCTCGACCATTTTCTCAAGTTGAGATAT
ATCTTTCTTTGAAGTCATGAATACCACTGTGCATAGAACTCCCAACTCCGGGAGCCGTTCATTGTTCTACCAAGATTTAGCATCTCCTGTTACGACACGGAAAGGAAAAT
TTTCAACTCCAGGCCAGGCAGCTGCTGTTTCTGCTTTATGGCGGGAGAATTTTGGAAACTCAGATCTTCCTCCTCCTCCGGTTTTCACTTTGGAAGACCGCTCGGTTTCA
GATTTTTCTCCCGAATCTGGGATTCCTGATTATCCTGTTTCCCCAGAAACTAAATCAGACCCCAGGACCCCTATCCGAAGGCATGACTTCTCTTCGCCGACGAAAAACAA
GTCAAATGCCAGCACTTCTTATACACCAATCAATGGACAACCAAGCCGGCAGGGATCGGCTGGCTTTAGTTGGTGGTCAACATCGAAAGGTGGTGGGAGCGAGCGAGAAG
ATAAGGGAAAAAGTTCACCAGTCGAAGGTGTGATTCAACCTGGTGCATTAATCACACTTCCAACCCCGAGGGAAGTTGCCAGACCGGAGGTGGAAAGAAATTGCTTGCCT
TTAGCAAAACTGAATGAGGAGGAATGGGTTACTGTCTATGGATTTTCCCCTGCTGATACAAATCTAGTTTTGAGGGAGTTTGAGAAATGCGGTGAGATCTTGAAACACCT
TCCTGGTCCAAGAGATGCTAATTGGATGCACATTCTTTATCAGAACCGATCTGATGCCCAGAAGGCTCTCAATAAAAATGGTATTCAAATTAATGGGGTGCTAATTGTTG
GTGTGAAACCAGTGGACCCAATGCATCGGCAGGCACTAGATGAAAAATTAAACAATCCGGGATTCATGGTTATCCCACCGGTATCTTCTCGAACCTCAGAACTCCTTGCA
ACGAGAGGACCCATGCTTCCCTACAGTCTTCAAAATGGTAACACTAGTGCACGGCACTCAGGAGGTGCCATCGCTTCACCATCAAAATCATTAGTATCTAAGGTGATGGA
TTTGATGTTTGGAGTCTAAGCTCCTCCTCGACTTCGTGTGGCAAGTAATTCCTTGAAATTTGAGAGCTTACACATTGATTAGGCGTGATATTTTATGGACTCTTATAACT
GTGTGCAATGTTCACATTTCACCGTCCATCTTGATCTTGTGATTGTTTTTCCTGATTCTTACTAAAATTGAGACAGAGGGACATGAACATGATGCTCGAACATTTTCTCG
TGCCCTTGAAAACCAAACAAATATGAGAACCAGGTATATAAGTATA
Protein sequenceShow/hide protein sequence
MNTTVHRTPNSGSRSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSVSDFSPESGIPDYPVSPETKSDPRTPIRRHDFSSPTKNKSNAST
SYTPINGQPSRQGSAGFSWWSTSKGGGSEREDKGKSSPVEGVIQPGALITLPTPREVARPEVERNCLPLAKLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHLPGPRD
ANWMHILYQNRSDAQKALNKNGIQINGVLIVGVKPVDPMHRQALDEKLNNPGFMVIPPVSSRTSELLATRGPMLPYSLQNGNTSARHSGGAIASPSKSLVSKVMDLMFGV