; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C024506 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C024506
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
Description60S ribosomal protein L24
Genome locationchr08:8836752..8838479
RNA-Seq ExpressionMELO3C024506
SyntenyMELO3C024506
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000988 - Ribosomal protein L24e-related
IPR011017 - TRASH domain
IPR023442 - Ribosomal protein L24e, conserved site
IPR038630 - Ribosomal protein L24e/L24 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYJ12607.1 hypothetical protein E1A91_A11G363400v1 [Gossypium mustelinum]3.4e-5496.52Show/hide
Query:  MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEK
        MVLKTELCRFSGAKIYPGKGIRF+R+DSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEK
Subjt:  MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEK

Query:  PEVRDAAREAALRYV
        PEVRDAAREAALR +
Subjt:  PEVRDAAREAALRYV

XP_004137862.1 60S ribosomal protein L24 [Cucumis sativus]2.6e-5497.39Show/hide
Query:  MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEK
        MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKR+EK
Subjt:  MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEK

Query:  PEVRDAAREAALRYV
        PEVRDAAREAALR +
Subjt:  PEVRDAAREAALRYV

XP_004143295.1 60S ribosomal protein L24 [Cucumis sativus]2.6e-5497.39Show/hide
Query:  MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEK
        MVLKTELCRFSGAKIYPG+GIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEK
Subjt:  MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEK

Query:  PEVRDAAREAALRYV
        PEVRDAAREAALR +
Subjt:  PEVRDAAREAALRYV

XP_008462521.1 PREDICTED: 60S ribosomal protein L24 [Cucumis melo]1.2e-5498.26Show/hide
Query:  MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEK
        MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEK
Subjt:  MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEK

Query:  PEVRDAAREAALRYV
        PEVRDAAREAALR +
Subjt:  PEVRDAAREAALRYV

XP_022743685.1 60S ribosomal protein L24 isoform X2 [Durio zibethinus]3.4e-5494.07Show/hide
Query:  MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEK
        MVLKTELCRFSGAKIYPGKGIRFVR+DSQVFLF+NSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEK
Subjt:  MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEK

Query:  PEVRDAAREAALRYVIVL
        PEVRDAAREAALR ++ +
Subjt:  PEVRDAAREAALRYVIVL

TrEMBL top hitse value%identityAlignment
A0A0A0KHD4 TRASH domain-containing protein1.3e-5497.39Show/hide
Query:  MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEK
        MVLKTELCRFSGAKIYPG+GIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEK
Subjt:  MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEK

Query:  PEVRDAAREAALRYV
        PEVRDAAREAALR +
Subjt:  PEVRDAAREAALRYV

A0A0A0LGG6 TRASH domain-containing protein1.3e-5497.39Show/hide
Query:  MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEK
        MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKR+EK
Subjt:  MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEK

Query:  PEVRDAAREAALRYV
        PEVRDAAREAALR +
Subjt:  PEVRDAAREAALRYV

A0A1S3CH43 60S ribosomal protein L245.7e-5598.26Show/hide
Query:  MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEK
        MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEK
Subjt:  MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEK

Query:  PEVRDAAREAALRYV
        PEVRDAAREAALR +
Subjt:  PEVRDAAREAALRYV

A0A5D2XF08 TRASH domain-containing protein1.6e-5496.52Show/hide
Query:  MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEK
        MVLKTELCRFSGAKIYPGKGIRF+R+DSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEK
Subjt:  MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEK

Query:  PEVRDAAREAALRYV
        PEVRDAAREAALR +
Subjt:  PEVRDAAREAALRYV

A0A5D3C883 60S ribosomal protein L245.7e-5598.26Show/hide
Query:  MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEK
        MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEK
Subjt:  MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEK

Query:  PEVRDAAREAALRYV
        PEVRDAAREAALR +
Subjt:  PEVRDAAREAALRYV

SwissProt top hitse value%identityAlignment
O65743 60S ribosomal protein L249.3e-5592.17Show/hide
Query:  MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEK
        MVLKTELCRFSGAKIYPG+GIRF+R DSQVFLF NSKCKRYFHNRLKPSKLTWTAM+RKQHKKD AQEAVKKRRRATKKPYSRSIVGATLEVIQKKR+EK
Subjt:  MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEK

Query:  PEVRDAAREAALRYV
        PEVRDAAREAALR +
Subjt:  PEVRDAAREAALRYV

P38666 60S ribosomal protein L24-22.3e-5389.57Show/hide
Query:  MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEK
        MVLKTELCRFSG KIYPG+GIRF+R+DSQVFLF NSKCKRYFHN+LKPSKL WTAMYRKQHKKD AQEAVK+RRRATKKPYSRSIVGATLEVIQKKR+EK
Subjt:  MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEK

Query:  PEVRDAAREAALRYV
        PEVRDAAREAALR +
Subjt:  PEVRDAAREAALRYV

P50888 60S ribosomal protein L248.7e-5389.57Show/hide
Query:  MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEK
        MVLKTELCRFSG KIYPGKGIRF+R+DSQVFLFANSKCKRYFHNRLKP+KL WTAMYRKQHKKDI  EA KKRRR TKKPYSRSIVGATLEVIQKKR+EK
Subjt:  MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEK

Query:  PEVRDAAREAALRYV
        PEVRDAAREAALR +
Subjt:  PEVRDAAREAALRYV

Q42347 60S ribosomal protein L24-13.0e-5389.57Show/hide
Query:  MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEK
        MVLKTELCRFSG KIYPG+GIRF+R+DSQVFLF NSKCKRYFHN+LKPSKL WTAMYRKQHKKD AQEAVK+RRRATKKPYSRSIVGATLEVIQKKR+EK
Subjt:  MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEK

Query:  PEVRDAAREAALRYV
        PEVRDAAREAALR +
Subjt:  PEVRDAAREAALRYV

Q9FUL4 60S ribosomal protein L246.4e-5693.91Show/hide
Query:  MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEK
        MVLKTELCRFSGAKIYPGKGIRF+R+DSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRR TKKPYSRSIVGATLEVIQK+R+EK
Subjt:  MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEK

Query:  PEVRDAAREAALRYV
        PEVRDAAREAALR +
Subjt:  PEVRDAAREAALRYV

Arabidopsis top hitse value%identityAlignment
AT2G36620.1 ribosomal protein L242.1e-5489.57Show/hide
Query:  MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEK
        MVLKTELCRFSG KIYPG+GIRF+R+DSQVFLF NSKCKRYFHN+LKPSKL WTAMYRKQHKKD AQEAVK+RRRATKKPYSRSIVGATLEVIQKKR+EK
Subjt:  MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEK

Query:  PEVRDAAREAALRYV
        PEVRDAAREAALR +
Subjt:  PEVRDAAREAALRYV

AT2G44860.1 Ribosomal protein L24e family protein9.0e-1338.14Show/hide
Query:  LKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAV----KKRRRATKKPYSRSIVGATLEVIQK
        ++ E C F  + IYPG GI+FVR D+++F F  SKC + F  +  P K+ WT  +R  H KD+ ++      KKR R  +  Y R++   TL  I+K
Subjt:  LKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAV----KKRRRATKKPYSRSIVGATLEVIQK

AT2G44860.2 Ribosomal protein L24e family protein9.0e-1338.14Show/hide
Query:  LKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAV----KKRRRATKKPYSRSIVGATLEVIQK
        ++ E C F  + IYPG GI+FVR D+++F F  SKC + F  +  P K+ WT  +R  H KD+ ++      KKR R  +  Y R++   TL  I+K
Subjt:  LKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAV----KKRRRATKKPYSRSIVGATLEVIQK

AT3G53020.1 Ribosomal protein L24e family protein1.6e-5489.57Show/hide
Query:  MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEK
        MVLKTELCRFSG KIYPG+GIRF+R+DSQVFLF NSKCKRYFHN+LKPSKL WTAMYRKQHKKD AQEAVK+RRRATKKPYSRSIVGATLEVIQKKR+EK
Subjt:  MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEK

Query:  PEVRDAAREAALRYV
        PEVRDAAREAALR +
Subjt:  PEVRDAAREAALRYV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTTGAAGACCGAGCTTTGTCGATTCAGTGGTGCGAAGATATATCCCGGTAAAGGAATCAGATTTGTCCGGGCTGATTCACAGGTTTTCCTGTTTGCTAACTCCAA
ATGCAAGAGGTACTTCCATAACAGACTGAAGCCTTCTAAGCTCACCTGGACAGCAATGTACAGGAAGCAACATAAGAAGGACATTGCTCAAGAGGCTGTAAAGAAGAGGA
GACGTGCCACCAAAAAACCCTACTCAAGGTCCATTGTTGGTGCTACATTGGAGGTGATCCAAAAGAAGAGATCTGAGAAGCCTGAGGTTCGCGATGCTGCAAGGGAAGCA
GCCCTCCGGTACGTGATTGTTCTAAGTGTGAAATATCATCTATCATTTGTATCCTACGTTTCTAACAACCACTAA
mRNA sequenceShow/hide mRNA sequence
TCCCTCGATAGATTTAGTTTCTAGGGTTTCGGCGACCACGAAGAAACGGAGGAGTAAGAACTGCAGCCGCCACCATGGTGTTGAAGACCGAGCTTTGTCGATTCAGTGGT
GCGAAGATATATCCCGGTAAAGGAATCAGATTTGTCCGGGCTGATTCACAGGTTTTCCTGTTTGCTAACTCCAAATGCAAGAGGTACTTCCATAACAGACTGAAGCCTTC
TAAGCTCACCTGGACAGCAATGTACAGGAAGCAACATAAGAAGGACATTGCTCAAGAGGCTGTAAAGAAGAGGAGACGTGCCACCAAAAAACCCTACTCAAGGTCCATTG
TTGGTGCTACATTGGAGGTGATCCAAAAGAAGAGATCTGAGAAGCCTGAGGTTCGCGATGCTGCAAGGGAAGCAGCCCTCCGGTACGTGATTGTTCTAAGTGTGAAATAT
CATCTATCATTTGTATCCTACGTTTCTAACAACCACTAAATAATATATTTATCAATCACATATCTTGTGTTTTTTCTTGGGTGCAGTGAAATTAAGGAGAGAATTAAGAA
AACAAAGGATGAAAAGAAGGCAAAGAAAGCAGAAGTGATGGCCAAAACACAGAAGACACAGGGGAAGGGTAACGTTGGTAGGGGAGCTGCACCGAAAGGACCAAAGCTTG
GTGGCGGCGGTGGCAAACGTTGAACTCTCTATGCTGTAAGCTAAGAAGAGTAGTAAGCTTTTGATCGTCTTTCAAATAGCAAGCCTGAGTAAAAGATAATGTTTGTTTAT
TTCCAAAATTTTGAATGGATCAATTATTGCACTTATGTTACAAATATCAGAGTTCTGCATTTTGTTTTCCTGTTAATTTGCATGATTATGAATGATAACTTGACTATGTT
CATTAGGGGCATGGTTCTTTTTTAGGAATTTCCATTAAAATTTTATTTGCTTACCTTTTGGATCCGTGAAGTATGGATAAATTATTTGGGCAACACGGATTGTTGTTGAG
CACTCTCGCA
Protein sequenceShow/hide protein sequence
MVLKTELCRFSGAKIYPGKGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREA
ALRYVIVLSVKYHLSFVSYVSNNH