; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MELO3C024562 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C024562
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionVacuolar protein sorting 55
Genome locationchr08:8350660..8352476
RNA-Seq ExpressionMELO3C024562
SyntenyMELO3C024562
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR007262 - Vps55/LEPROT


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143389.2 vacuolar protein sorting-associated protein 55 homolog [Cucumis sativus]5.8e-4398.89Show/hide
Query:  AALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
        +ALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  AALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW

XP_008462591.2 PREDICTED: vacuolar protein sorting-associated protein 55 homolog isoform X1 [Cucumis melo]5.8e-4398.89Show/hide
Query:  AALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
        +ALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  AALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW

XP_022133002.1 vacuolar protein sorting-associated protein 55 homolog isoform X1 [Momordica charantia]5.8e-4398.89Show/hide
Query:  AALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
        +ALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  AALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW

XP_022133003.1 vacuolar protein sorting-associated protein 55 homolog isoform X2 [Momordica charantia]5.8e-4398.89Show/hide
Query:  AALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
        +ALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  AALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW

XP_022133004.1 vacuolar protein sorting-associated protein 55 homolog isoform X3 [Momordica charantia]5.8e-4398.89Show/hide
Query:  AALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
        +ALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  AALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW

TrEMBL top hitse value%identityAlignment
A0A0A0KHI6 Uncharacterized protein2.8e-4398.89Show/hide
Query:  AALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
        +ALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  AALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW

A0A1S3CHB4 vacuolar protein sorting-associated protein 55 homolog isoform X22.8e-4398.89Show/hide
Query:  AALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
        +ALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  AALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW

A0A6J1BUQ3 vacuolar protein sorting-associated protein 55 homolog isoform X32.8e-4398.89Show/hide
Query:  AALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
        +ALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  AALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW

A0A6J1BVE3 vacuolar protein sorting-associated protein 55 homolog isoform X12.8e-4398.89Show/hide
Query:  AALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
        +ALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  AALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW

A0A6J1BXT5 vacuolar protein sorting-associated protein 55 homolog isoform X22.8e-4398.89Show/hide
Query:  AALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
        +ALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
Subjt:  AALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW

SwissProt top hitse value%identityAlignment
Q9AST6 Vacuolar protein sorting-associated protein 55 homolog1.8e-1550.63Show/hide
Query:  AALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVL
        + +MYVL+PMP LFFGG  +  L +     WI AAKFLTGAS VGS+AIP IL+HA +I  GA+ ++  S+ +F+  +L
Subjt:  AALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVL

Arabidopsis top hitse value%identityAlignment
AT1G32410.1 Vacuolar protein sorting 55 (VPS55) family protein1.3e-1650.63Show/hide
Query:  AALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVL
        + +MYVL+PMP LFFGG  +  L +     WI AAKFLTGAS VGS+AIP IL+HA +I  GA+ ++  S+ +F+  +L
Subjt:  AALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVL

AT1G32410.2 Vacuolar protein sorting 55 (VPS55) family protein1.3e-1650.63Show/hide
Query:  AALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVL
        + +MYVL+PMP LFFGG  +  L +     WI AAKFLTGAS VGS+AIP IL+HA +I  GA+ ++  S+ +F+  +L
Subjt:  AALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVL

AT1G32410.3 Vacuolar protein sorting 55 (VPS55) family protein1.3e-1650.63Show/hide
Query:  AALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVL
        + +MYVL+PMP LFFGG  +  L +     WI AAKFLTGAS VGS+AIP IL+HA +I  GA+ ++  S+ +F+  +L
Subjt:  AALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVL

AT3G11530.1 Vacuolar protein sorting 55 (VPS55) family protein6.8e-4286.67Show/hide
Query:  AALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
        +ALMYV+VPMPC+FFGGGSTQFLISRDGGGWI AAKFLTGASTVGSLAIPIILRHA MI+TGAM IEF SFFIF+CTV+CFHR SL+DDW
Subjt:  AALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW

AT3G11530.2 Vacuolar protein sorting 55 (VPS55) family protein6.8e-4286.67Show/hide
Query:  AALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW
        +ALMYV+VPMPC+FFGGGSTQFLISRDGGGWI AAKFLTGASTVGSLAIPIILRHA MI+TGAM IEF SFFIF+CTV+CFHR SL+DDW
Subjt:  AALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTACCAATCACGATTTCTCTGCAGCTTTGATGTACGTGCTTGTTCCAATGCCTTGTTTATTTTTTGGAGGTGGGTCCACACAGTTTCTGATTAGCCGAGATGGTGG
AGGATGGATAGGTGCTGCTAAGTTCTTGACGGGCGCCTCAACTGTCGGGAGTTTGGCAATTCCTATTATCCTGAGGCATGCTCATATGATCGACACAGGAGCCATGTTCA
TAGAATTCGTTTCCTTCTTCATATTTGTTTGCACTGTGTTGTGCTTCCACCGTGTTAGCCTTGAAGATGATTGGTGA
mRNA sequenceShow/hide mRNA sequence
AACCAACAACCATATTAAAGGCTCAGCAATTGACCTTGCAAAATGAGCACTAACCCGTTCTCATAGTCACCTGACGCCAATTAAAGACTCTTTTCTTGGGAGGATCCCCG
TAAAGAGCTTCCATCATCATAAGCATGCAGGGTATCGATGCTTGAACTTTAGAAGGCATTTGTCCCATTATTAATAAACCTGTTATTGCTGCCACCACGGTTCTCTTAGG
ATGGATTCTTTTTAATACTCTTGATGTAACTGTTAAAATTTTGAACGGACTTCTATCAAAAGAAGTTCTATGAAGGAGAGAAGTTGCAAACCCTATATGATTTATTTTTC
ATCTGTTTTTGTTATCATCATGGCAGGCTTGTGCACTATACAACAATTGGTGGCCTTTGTTATCAGGTGAGCACCAAGTTTGTTTTTTTTGCTCATAGATTACTTTTAAT
GAGTACCAATCACGATTTCTCTGCAGCTTTGATGTACGTGCTTGTTCCAATGCCTTGTTTATTTTTTGGAGGTGGGTCCACACAGTTTCTGATTAGCCGAGATGGTGGAG
GATGGATAGGTGCTGCTAAGTTCTTGACGGGCGCCTCAACTGTCGGGAGTTTGGCAATTCCTATTATCCTGAGGCATGCTCATATGATCGACACAGGAGCCATGTTCATA
GAATTCGTTTCCTTCTTCATATTTGTTTGCACTGTGTTGTGCTTCCACCGTGTTAGCCTTGAAGATGATTGGTGATAATTCCAGACCAATATAGTGAAGCAGATTTGAGT
GCCGATGATTATAAAACCTTCCTTTGTTAAATTTTAATCCTCGTCTTTTGAACACAATCGACACGAGACATTGTATAACAAGAAGAAACTTGCCCAGGAGAAAAGAAACC
GAGCTCGAAGTTTCTCATATGTAAATCAATCTAATGTATGATAATAGTTATCTTTTTTAACCCCCTTCTTTTCTTGTTATGTCCAACGAAATTTGTGTTAAGTGAAAGGC
TTAGGCAATACTAATTTTAAGAGTATATTCTGTGGTTTGAACTTTCAAAACCTCTATTTATTTTGATTCCTTTCACATGTTTATTTGTTTTGAAGTTTCAATAAATAACT
ATTTTATGGTTCTTGT
Protein sequenceShow/hide protein sequence
MSTNHDFSAALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKFLTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW