| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6605170.1 RNA polymerase sigma factor sigA, partial [Cucurbita argyrosperma subsp. sororia] | 1.6e-261 | 93.32 | Show/hide |
Query: MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWED
MMAT AIIGLGAAKRLLNSSSYYSDFTEK+LY ND+RLGQ QVS TKSVVIAK SA+FSPSYP SNRH QCIKAVKEHV+TPSSPTAEPWL NTTIWED
Subjt: MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PR KT KKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQL+P+ISPELLQNRL+GYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
L+SEE+L H+EVVRLSKKIKVGLALEEHKTRLKERL CEPSE+QLAISL+ISRAELRSR+MECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADN LENNPWHGTDTW LK EVNKLINMTL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK R
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLIKH
KMEAML+KH
Subjt: KMEAMLIKH
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| XP_004151855.1 RNA polymerase sigma factor sigA [Cucumis sativus] | 1.5e-267 | 95.68 | Show/hide |
Query: MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWED
MMAT AIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVS +KSVVIAKSSANFSP YP SNRHSQQCIKAVKEHVETPSSP AEPW NTT WED
Subjt: MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
EET+LK TVEALLLLQKSMLEKQW+LSFEQTVSTD P+EKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
LLSEELLSHAEVVRLSKKIKVGL LEE KTRLK+RLGCEPSEDQLAISLKISRAELRSRMME SLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKV+NATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILK EVN+LINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLIKH
KMEAML+KH
Subjt: KMEAMLIKH
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| XP_016902935.1 PREDICTED: RNA polymerase sigma factor sigA [Cucumis melo] | 5.6e-283 | 100 | Show/hide |
Query: MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWED
MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWED
Subjt: MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
LLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLIKH
KMEAMLIKH
Subjt: KMEAMLIKH
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| XP_023533104.1 RNA polymerase sigma factor sigA-like [Cucurbita pepo subsp. pepo] | 5.5e-262 | 93.32 | Show/hide |
Query: MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWED
MMAT AIIGLGAAKRLLNSSSYYSDFTEK+LY ND+RLGQ QVS TKSVVIAK SA+FSPSYP SNRH QCIKAVKEHV+TPSSPTAEPWL NTTIWED
Subjt: MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD+PR KT KKVPVTCSGVSARQRRMSSKRKIQSKHVF+AQPKISKQL+P+ISPELLQNRL+GYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
L+SEE+L H+EVVRLSKKIKVGLALEEHKTRLKERL CEPSE+QLAISL+ISRAELRSR+MECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADN LENNPWHGTDTWILK EVNKLINMTL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK R
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLIKH
KMEAML+KH
Subjt: KMEAMLIKH
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| XP_038902049.1 RNA polymerase sigma factor sigA [Benincasa hispida] | 6.4e-271 | 96.86 | Show/hide |
Query: MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYA-NDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWE
MMAT AIIGLGAAKRLLNSSSYYSDFTEKILY ND+RLGQTQVSPTKSVVIAKSSANFSPSYP SNRHS QCIKAVKEHV+TPSSPTAEPWL NTTIWE
Subjt: MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYA-NDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWE
Query: DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVK
DEE DLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PR KT KKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVK
Subjt: DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVK
Query: GLLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG
GLLSEELLSHAEVVRLSKKIKVGLALEE KTRLKERLGCEPSEDQLAISLKISRAELRSR+MECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG
Subjt: GLLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG
Query: LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDR
LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDR
Subjt: LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDR
Query: EAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKT
EAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKT
Subjt: EAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKT
Query: RKMEAMLIKH
RKMEAML+KH
Subjt: RKMEAMLIKH
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LQR2 RNA_pol_sigma70 domain-containing protein | 7.2e-268 | 95.68 | Show/hide |
Query: MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWED
MMAT AIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVS +KSVVIAKSSANFSP YP SNRHSQQCIKAVKEHVETPSSP AEPW NTT WED
Subjt: MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
EET+LK TVEALLLLQKSMLEKQW+LSFEQTVSTD P+EKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
LLSEELLSHAEVVRLSKKIKVGL LEE KTRLK+RLGCEPSEDQLAISLKISRAELRSRMME SLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKV+NATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILK EVN+LINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLIKH
KMEAML+KH
Subjt: KMEAMLIKH
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| A0A1S4E4N5 RNA polymerase sigma factor sigA | 2.7e-283 | 100 | Show/hide |
Query: MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWED
MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWED
Subjt: MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
LLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLIKH
KMEAMLIKH
Subjt: KMEAMLIKH
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| A0A5D3BME8 RNA polymerase sigma factor sigA | 2.7e-283 | 100 | Show/hide |
Query: MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWED
MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWED
Subjt: MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
LLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLIKH
KMEAMLIKH
Subjt: KMEAMLIKH
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| A0A6J1D604 RNA polymerase sigma factor sigA | 2.5e-260 | 92.73 | Show/hide |
Query: MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWED
MMAT AIIGLGAAKRLLNSSSYYSDF EK+LYAND+RLGQ+QVSPTKSVVIAKSSANFSPS+P SNRH+ QCIKAVKEHV+TPSSPT EPWL N+T WED
Subjt: MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
EE DLKCTVEALLLLQKSMLEKQWNLSFEQTV TD R +T KKVPVTCSGVSARQRRMSSKRKIQSK+ FM QPKISKQLR TISPELLQ RLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
L+SEELLSHAEVVRLSKKIKVGLALEE KTRLKERLGCEPSEDQLAISLKISR ELRSR++ECSLA+EKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADN LEN+PWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLIKH
KMEAML+KH
Subjt: KMEAMLIKH
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| A0A6J1KWY7 RNA polymerase sigma factor sigA-like | 1.1e-260 | 92.93 | Show/hide |
Query: MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWED
MMAT AIIGLGAAKRLLNSSSYYSDFTEK+LY ND+RLGQ QVS TK VVIAK SA+FSPSY SNRH QCIKAVKEHV+TPSSPTAEPWL NTTIWED
Subjt: MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PR KT KKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQL+P ISPELLQNRL+GYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
L+SEE+L H+EVVRLSKKIKVGLALEEHKTRLKERL C+PSE+QLAISL+ISRAELRSR+MECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADN LENNPWHGTDTWILK EVNKLINMTL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK R
Subjt: AFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLIKH
KMEAML+KH
Subjt: KMEAMLIKH
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O22056 RNA polymerase sigma factor sigB | 1.4e-39 | 36.54 | Show/hide |
Query: SEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIG
S +LL+ E LS I+ L LE +T L ER G +P+ Q A + + + LR R+ +L ++K+ SN+RLV+SIA+ Y G + DLVQ G G
Subjt: SEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIG
Query: LLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKL-QEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
L+RG EKFD++KGFK STY +WWI+Q V ++L + SR +RLP H+ E ++ A+ +L E G P + IAE+ +S K++ + SLD++
Subjt: LLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKL-QEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNCLENNPWHGTDTWIL-----KAEVNKLINMTLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQVGLVALEKLKK
+ N P E IAD P T IL + +++K+++ +LG RE+++IR G+ D T +EI + +G+SRERVRQ+ A KLK
Subjt: FPSLNGLPGETHHSYIADNCLENNPWHGTDTWIL-----KAEVNKLINMTLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQVGLVALEKLKK
Query: AAKTRKMEAMLI
+ ++ L+
Subjt: AAKTRKMEAMLI
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| O24629 RNA polymerase sigma factor sigA | 3.6e-192 | 69.25 | Show/hide |
Query: MATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWE--
MAT A+IGL KRLL+SS Y+SD TEK L ND+ Q ++ TKS + AK ++N+SPS+P SNRH+Q KA+KE V+ S T +PWLPN T E
Subjt: MATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWE--
Query: ----DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTL--KKVPV-TCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQN
D++ + +VEA+LLLQKSMLEK WNLSFE+ VS++ P + T+ KK+PV TCSG+SARQRR+ +K+K HV +S
Subjt: ----DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTL--KKVPV-TCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQN
Query: RLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEM
+++GYVKG++SE++LSH EVVRLSKKIK GL L++HK+RLK+RLGCEPS++QLA+SLKISRAEL++ +MEC LAREKLAMSNVRLVMSIAQRYDN+GAEM
Subjt: RLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEM
Query: ADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAIS
+DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLGLIRNAK++LQEKGITPS+DRIAESLNMS+KKV+NATEA+S
Subjt: ADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAIS
Query: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEK
KVFSLDR+AFPSLNGLPGETHHSYIAD LENNPWHG D LK EV+KLI+ TLG+RE+EIIRLY+GLD ECLTWE+ISKRIGLSRERVRQVGLVALEK
Subjt: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEK
Query: LKKAAKTRKMEAMLIKH
LK AA+ RKMEAM++K+
Subjt: LKKAAKTRKMEAMLIKH
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| P26683 RNA polymerase sigma factor SigA | 3.8e-40 | 34.24 | Show/hide |
Query: KISKQLRPTISPE--LLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMS
K +K R T S + ++ ++ Y++ + LL E + L++KI L LE + RL E+L +P + + A ++++ R R+ A++K+ S
Subjt: KISKQLRPTISPE--LLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMS
Query: NVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVKLQEKGITPSLDR
N+RLV+SIA++Y N G DL+Q G +GL+R EKFD KG+K STY WWIRQ ++RA+ + SRT+RLP HL+E + I + K+ QE G P+ +
Subjt: NVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVKLQEKGITPSLDR
Query: IAESLNMSKKKV----KNATEAISKVFSLDREAFPSLNGL---PGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDN-E
IA + M+ +K+ K+A IS + +E L GET ++ N +L+ ++ K+++ +L RER+++RL +GLD+
Subjt: IAESLNMSKKKV----KNATEAISKVFSLDREAFPSLNGL---PGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDN-E
Query: CLTWEEISKRIGLSRERVRQVGLVALEKLK
T EEI + ++RER+RQ+ AL KL+
Subjt: CLTWEEISKRIGLSRERVRQVGLVALEKLK
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| P38023 RNA polymerase sigma factor SigA1 | 6.5e-40 | 34.44 | Show/hide |
Query: AQPKISKQLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAM
A K ++R T + ++ ++ Y++ + LL E + L+++I LALE + L E+L PS+ + A ++ E R R+ A++K+
Subjt: AQPKISKQLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAM
Query: SNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVKLQEKGITPSLD
SN+RLV+SIA++Y N G DL+Q G +GL+R EKFD KG+K STY WWIRQ ++RA+ + SRT+RLP HL+E + I + K+ QE G P+ +
Subjt: SNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVKLQEKGITPSLD
Query: RIAESLNMSKKKV----KNATEAISKVFSLDREAFPSLNGL---PGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDN-
IA + M+ +K+ K+A IS + +E L GET +A N +L+ ++ +++ TL RER+++RL +GLD+
Subjt: RIAESLNMSKKKV----KNATEAISKVFSLDREAFPSLNGL---PGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDN-
Query: ECLTWEEISKRIGLSRERVRQVGLVALEKLK
T EEI + ++RER+RQ+ AL KL+
Subjt: ECLTWEEISKRIGLSRERVRQVGLVALEKLK
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| Q0J7T6 RNA polymerase sigma factor sigA | 1.2e-131 | 51.6 | Show/hide |
Query: MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYP--------------LSNRHSQQCIKAVKEHVE-----
M AT A+IGL A RLL++S F L + LG + +F+P P LS Q ++A++ H
Subjt: MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYP--------------LSNRHSQQCIKAVKEHVE-----
Query: TPSSPTAEPWLPNTTIWEDEETDLKCTVEALLLLQKSMLEKQWNLSFE-----QTVSTDMPREKTLK-KVPVTCSGVSARQRRMSSKRKIQSKHVFMAQP
P P P P+ DL+ ++EA++LLQ+SMLEKQW L F+ + + T K V V S VSARQRRMS +R+ ++K
Subjt: TPSSPTAEPWLPNTTIWEDEETDLKCTVEALLLLQKSMLEKQWNLSFE-----QTVSTDMPREKTLK-KVPVTCSGVSARQRRMSSKRKIQSKHVFMAQP
Query: KISKQLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNV
+ +SPEL+Q+R + Y++G +S+ELL+H +VV LS KIK G+ L++ +++LKE+LG EPS QLA SLKIS ELRSRM E LARE L MSN+
Subjt: KISKQLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNV
Query: RLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAE
RLV+SIAQ+YDN+G E+ADL+QGGLIGLLRGIEKFD+S+GF+ISTYVYWWIRQGVSRAL ENS+T RLPT+LHERL IR AK +L+++GI P+++ IA
Subjt: RLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAE
Query: SLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRI
SLN+S+KKV NATEA++KV SLD++AFPSLNGLPGET HSYI D + N+PWHG + W LK EVNKL+N TL +RER+IIRLYHG+ +C TWE+IS++
Subjt: SLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRI
Query: GLSRERVRQVGLVALEKLKKAAKTRKMEAML
GLSRERVRQVGL+A+EKLK AA+ + +EA+L
Subjt: GLSRERVRQVGLVALEKLKKAAKTRKMEAML
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G08540.1 RNApolymerase sigma subunit 2 | 1.0e-40 | 36.54 | Show/hide |
Query: SEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIG
S +LL+ E LS I+ L LE +T L ER G +P+ Q A + + + LR R+ +L ++K+ SN+RLV+SIA+ Y G + DLVQ G G
Subjt: SEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIG
Query: LLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKL-QEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
L+RG EKFD++KGFK STY +WWI+Q V ++L + SR +RLP H+ E ++ A+ +L E G P + IAE+ +S K++ + SLD++
Subjt: LLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKL-QEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNCLENNPWHGTDTWIL-----KAEVNKLINMTLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQVGLVALEKLKK
+ N P E IAD P T IL + +++K+++ +LG RE+++IR G+ D T +EI + +G+SRERVRQ+ A KLK
Subjt: FPSLNGLPGETHHSYIADNCLENNPWHGTDTWIL-----KAEVNKLINMTLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQVGLVALEKLKK
Query: AAKTRKMEAMLI
+ ++ L+
Subjt: AAKTRKMEAMLI
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| AT1G64860.1 sigma factor A | 2.6e-193 | 69.25 | Show/hide |
Query: MATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWE--
MAT A+IGL KRLL+SS Y+SD TEK L ND+ Q ++ TKS + AK ++N+SPS+P SNRH+Q KA+KE V+ S T +PWLPN T E
Subjt: MATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWE--
Query: ----DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTL--KKVPV-TCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQN
D++ + +VEA+LLLQKSMLEK WNLSFE+ VS++ P + T+ KK+PV TCSG+SARQRR+ +K+K HV +S
Subjt: ----DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTL--KKVPV-TCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQN
Query: RLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEM
+++GYVKG++SE++LSH EVVRLSKKIK GL L++HK+RLK+RLGCEPS++QLA+SLKISRAEL++ +MEC LAREKLAMSNVRLVMSIAQRYDN+GAEM
Subjt: RLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEM
Query: ADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAIS
+DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLGLIRNAK++LQEKGITPS+DRIAESLNMS+KKV+NATEA+S
Subjt: ADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAIS
Query: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEK
KVFSLDR+AFPSLNGLPGETHHSYIAD LENNPWHG D LK EV+KLI+ TLG+RE+EIIRLY+GLD ECLTWE+ISKRIGLSRERVRQVGLVALEK
Subjt: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEK
Query: LKKAAKTRKMEAMLIKH
LK AA+ RKMEAM++K+
Subjt: LKKAAKTRKMEAMLIKH
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| AT1G64860.2 sigma factor A | 8.1e-179 | 68.32 | Show/hide |
Query: MATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWE--
MAT A+IGL KRLL+SS Y+SD TEK L ND+ Q ++ TKS + AK ++N+SPS+P SNRH+Q KA+KE V+ S T +PWLPN T E
Subjt: MATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVIAKSSANFSPSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWE--
Query: ----DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTL--KKVPV-TCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQN
D++ + +VEA+LLLQKSMLEK WNLSFE+ VS++ P + T+ KK+PV TCSG+SARQRR+ +K+K HV +S
Subjt: ----DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDMPREKTL--KKVPV-TCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQN
Query: RLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEM
+++GYVKG++SE++LSH EVVRLSKKIK GL L++HK+RLK+RLGCEPS++QLA+SLKISRAEL++ +MEC LAREKLAMSNVRLVMSIAQRYDN+GAEM
Subjt: RLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEM
Query: ADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAIS
+DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLGLIRNAK++LQEKGITPS+DRIAESLNMS+KKV+NATEA+S
Subjt: ADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEKGITPSLDRIAESLNMSKKKVKNATEAIS
Query: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRI
KVFSLDR+AFPSLNGLPGETHHSYIAD LENNPWHG D LK EV+KLI+ TLG+RE+EIIRLY+GLD ECLTWE+ISKRI
Subjt: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRI
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| AT2G36990.1 RNApolymerase sigma-subunit F | 2.0e-36 | 32.59 | Show/hide |
Query: LKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
L+ ++ G +++LL+ E L I+ L LE+ KT+L+ + GCEP+ + A ++ IS L+S + +REKL +N+RLV+ IA++Y N G
Subjt: LKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
Query: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNA-KVKLQEKGITPSLDRIAESLNMSKKKVKNATEAIS
DL+Q G +GL++ +EKF G + +TY YWWIRQ + +++ +NSRT+RLP +++ LG + A K +QE PS + +A + +S +K+
Subjt: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNA-KVKLQEKGITPSLDRIAESLNMSKKKVKNATEAIS
Query: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLD-NECLTWEEISKRIGLSRERVRQVGLVALE
S+ + + + T D+ +E P +++ V L+N+ L +ER II+L G+D + + EI + GLS+ERVRQ+ AL
Subjt: KVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLD-NECLTWEEISKRIGLSRERVRQVGLVALE
Query: KLKKAAKTRKMEA
+LK+ + + A
Subjt: KLKKAAKTRKMEA
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| AT5G13730.1 sigma factor 4 | 5.4e-34 | 32.84 | Show/hide |
Query: SSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSR
S KR+ + + + ++ + E + V G LS E V+L +K G LE T ++E + +++ L R + +
Subjt: SSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCEPSEDQLAISLKISRAELRSR
Query: MMEC----SLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIR
E AREK+ RLV+SIA Y G + DL+Q G IGLLRG E+FD +G+K+STYVYWWI+Q + RA+ SR ++LP + E +
Subjt: MMEC----SLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIR
Query: NAKVKLQEK-GITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREI
A L K PS + IAE LN++ V+ A E SLDR A + G I E P +K E+ +L+ +L RE +
Subjt: NAKVKLQEK-GITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDTWILKAEVNKLINMTLGDREREI
Query: IRLYHGLDNEC-LTWEEISKRIGLSRERVRQVGLVALEKLK
+ LY GL+ E +++EEI K + LSRERVRQ+ +AL+KL+
Subjt: IRLYHGLDNEC-LTWEEISKRIGLSRERVRQVGLVALEKLK
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