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MELO3C024806 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C024806
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr07:17905020..17905770
RNA-Seq ExpressionMELO3C024806
SyntenyMELO3C024806
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025972.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.7e-7072.68Show/hide
Query:  MEIGVSIQQFDMDVTQEYIHLYNNIMRLYITRLGAAMGHLRSNNARLRDVADDPQQ------------EEIYNMYNLRDVPPLVHKGRVQVEEAELDEVY
        M IGV IQQFD+DVTQEYIH Y NI RLYIT+LGA     RSNNARLRDVADD QQ            EEI+NMY+L  VPP +H+GRVQVEEAELDEVY
Subjt:  MEIGVSIQQFDMDVTQEYIHLYNNIMRLYITRLGAAMGHLRSNNARLRDVADDPQQ------------EEIYNMYNLRDVPPLVHKGRVQVEEAELDEVY

Query:  HNVEEVLLTTQTQSQTGYGSPMTMMPTFGAGYCDSEVGIGYYDAGIGPSSSYMVVGPSTSYMHGQGRGYGEHNEYLYHEAPADVSDQQESQQEPENQEDR
        HNVEE+  TTQ Q+QTGYGSPM MMPTFG GYCD EV   YYD+G+GPSSSYM VGPSTSYMHG    YGEHNEYLYHEAP +VSD+QE QQEPENQE+ 
Subjt:  HNVEEVLLTTQTQSQTGYGSPMTMMPTFGAGYCDSEVGIGYYDAGIGPSSSYMVVGPSTSYMHGQGRGYGEHNEYLYHEAPADVSDQQESQQEPENQEDR

Query:  EQHRV
        EQHRV
Subjt:  EQHRV

KAA0026041.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]3.9e-67100Show/hide
Query:  MYNLRDVPPLVHKGRVQVEEAELDEVYHNVEEVLLTTQTQSQTGYGSPMTMMPTFGAGYCDSEVGIGYYDAGIGPSSSYMVVGPSTSYMHGQGRGYGEHN
        MYNLRDVPPLVHKGRVQVEEAELDEVYHNVEEVLLTTQTQSQTGYGSPMTMMPTFGAGYCDSEVGIGYYDAGIGPSSSYMVVGPSTSYMHGQGRGYGEHN
Subjt:  MYNLRDVPPLVHKGRVQVEEAELDEVYHNVEEVLLTTQTQSQTGYGSPMTMMPTFGAGYCDSEVGIGYYDAGIGPSSSYMVVGPSTSYMHGQGRGYGEHN

Query:  EYLYHEAPADVSDQQESQQEPENQEDREQHRV
        EYLYHEAPADVSDQQESQQEPENQEDREQHRV
Subjt:  EYLYHEAPADVSDQQESQQEPENQEDREQHRV

KAA0062642.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.4e-7778.54Show/hide
Query:  MEIGVSIQQFDMDVTQEYIHLYNNIMRLYITRLGAAMGHLRSNNARLRDVADDPQQ------------EEIYNMYNLRDVPPLVHKGRVQVEEAELDEVY
        M I VSIQQFD DVTQEYIH Y+NI RLYITR GAA+G  RSNNARLRDVADD QQ            EEI+NMY+L  VPP VH+G V+VEEAELD+VY
Subjt:  MEIGVSIQQFDMDVTQEYIHLYNNIMRLYITRLGAAMGHLRSNNARLRDVADDPQQ------------EEIYNMYNLRDVPPLVHKGRVQVEEAELDEVY

Query:  HNVEEVLLTTQTQSQTGYGSPMTMMPTFGAGYCDSEVGIGYYDAGIGPSSSYMVVGPSTSYMHGQGRGYGEHNEYLYHEAPADVSDQQESQQEPENQEDR
        HNVEEV  TTQTQSQTGYGSPMTMMPTF AGYCD EVGIGYYDAG+GPSSSY+ V PSTSYMHG  RGYGEHNEYLYHEAPADVSD+QE QQEPENQEDR
Subjt:  HNVEEVLLTTQTQSQTGYGSPMTMMPTFGAGYCDSEVGIGYYDAGIGPSSSYMVVGPSTSYMHGQGRGYGEHNEYLYHEAPADVSDQQESQQEPENQEDR

Query:  EQHRV
        EQHRV
Subjt:  EQHRV

TYK11193.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.3e-6779.31Show/hide
Query:  IGVSIQQFDMDVTQEYIHLYNNIMRLYITRLGAAMGHLRSNNARLRDVADDPQQ------------EEIYNMYNLRDVPPLVHKGRVQVEEAELDEVYHN
        IGVSIQQFD+DVTQEYIH YNNI RLYITR GAA+GHLRSNNARLRDVADDPQQ            EEI+NMY+L  VPP VH+GRV+VEEAELDEVYHN
Subjt:  IGVSIQQFDMDVTQEYIHLYNNIMRLYITRLGAAMGHLRSNNARLRDVADDPQQ------------EEIYNMYNLRDVPPLVHKGRVQVEEAELDEVYHN

Query:  VEEVLLTTQTQSQTGYGSPMTMMPTFGAGYCDSEVGIGYYDAGIGPSSSYMVVGPSTSYMHGQGRGYGEHNEYL
        VEEV  TTQTQSQTGYGSPMTMMPTFGAGY DSEVG GYYDAGI PSS YM VGPS  YMHG  RGYGEHN+YL
Subjt:  VEEVLLTTQTQSQTGYGSPMTMMPTFGAGYCDSEVGIGYYDAGIGPSSSYMVVGPSTSYMHGQGRGYGEHNEYL

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]5.2e-8078.54Show/hide
Query:  MEIGVSIQQFDMDVTQEYIHLYNNIMRLYITRLGAAMGHLRSNNARLRDVADDPQQ------------EEIYNMYNLRDVPPLVHKGRVQVEEAELDEVY
        M I VSIQQFDMDVTQEYIHLYNNI RLYITR GA +GHLRSNNARLRDV +DPQQ            E+I+N+Y+L  VPP VH+ R +VEEAELDEVY
Subjt:  MEIGVSIQQFDMDVTQEYIHLYNNIMRLYITRLGAAMGHLRSNNARLRDVADDPQQ------------EEIYNMYNLRDVPPLVHKGRVQVEEAELDEVY

Query:  HNVEEVLLTTQTQSQTGYGSPMTMMPTFGAGYCDSEVGIGYYDAGIGPSSSYMVVGPSTSYMHGQGRGYGEHNEYLYHEAPADVSDQQESQQEPENQEDR
        HNVEEV  TTQTQSQTGYGSPMTMMPTFGAGYCDSEV IGYYDA +GP SSYM VGPSTSYM+G GRGYGEHNEYLYHEAP DVSD+QE QQEP+NQEDR
Subjt:  HNVEEVLLTTQTQSQTGYGSPMTMMPTFGAGYCDSEVGIGYYDAGIGPSSSYMVVGPSTSYMHGQGRGYGEHNEYLYHEAPADVSDQQESQQEPENQEDR

Query:  EQHRV
        EQHRV
Subjt:  EQHRV

TrEMBL top hitse value%identityAlignment
A0A5A7SLF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X18.1e-7172.68Show/hide
Query:  MEIGVSIQQFDMDVTQEYIHLYNNIMRLYITRLGAAMGHLRSNNARLRDVADDPQQ------------EEIYNMYNLRDVPPLVHKGRVQVEEAELDEVY
        M IGV IQQFD+DVTQEYIH Y NI RLYIT+LGA     RSNNARLRDVADD QQ            EEI+NMY+L  VPP +H+GRVQVEEAELDEVY
Subjt:  MEIGVSIQQFDMDVTQEYIHLYNNIMRLYITRLGAAMGHLRSNNARLRDVADDPQQ------------EEIYNMYNLRDVPPLVHKGRVQVEEAELDEVY

Query:  HNVEEVLLTTQTQSQTGYGSPMTMMPTFGAGYCDSEVGIGYYDAGIGPSSSYMVVGPSTSYMHGQGRGYGEHNEYLYHEAPADVSDQQESQQEPENQEDR
        HNVEE+  TTQ Q+QTGYGSPM MMPTFG GYCD EV   YYD+G+GPSSSYM VGPSTSYMHG    YGEHNEYLYHEAP +VSD+QE QQEPENQE+ 
Subjt:  HNVEEVLLTTQTQSQTGYGSPMTMMPTFGAGYCDSEVGIGYYDAGIGPSSSYMVVGPSTSYMHGQGRGYGEHNEYLYHEAPADVSDQQESQQEPENQEDR

Query:  EQHRV
        EQHRV
Subjt:  EQHRV

A0A5A7SPC0 GATA zinc finger domain-containing protein 10-like isoform X21.9e-67100Show/hide
Query:  MYNLRDVPPLVHKGRVQVEEAELDEVYHNVEEVLLTTQTQSQTGYGSPMTMMPTFGAGYCDSEVGIGYYDAGIGPSSSYMVVGPSTSYMHGQGRGYGEHN
        MYNLRDVPPLVHKGRVQVEEAELDEVYHNVEEVLLTTQTQSQTGYGSPMTMMPTFGAGYCDSEVGIGYYDAGIGPSSSYMVVGPSTSYMHGQGRGYGEHN
Subjt:  MYNLRDVPPLVHKGRVQVEEAELDEVYHNVEEVLLTTQTQSQTGYGSPMTMMPTFGAGYCDSEVGIGYYDAGIGPSSSYMVVGPSTSYMHGQGRGYGEHN

Query:  EYLYHEAPADVSDQQESQQEPENQEDREQHRV
        EYLYHEAPADVSDQQESQQEPENQEDREQHRV
Subjt:  EYLYHEAPADVSDQQESQQEPENQEDREQHRV

A0A5A7V342 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.2e-7778.54Show/hide
Query:  MEIGVSIQQFDMDVTQEYIHLYNNIMRLYITRLGAAMGHLRSNNARLRDVADDPQQ------------EEIYNMYNLRDVPPLVHKGRVQVEEAELDEVY
        M I VSIQQFD DVTQEYIH Y+NI RLYITR GAA+G  RSNNARLRDVADD QQ            EEI+NMY+L  VPP VH+G V+VEEAELD+VY
Subjt:  MEIGVSIQQFDMDVTQEYIHLYNNIMRLYITRLGAAMGHLRSNNARLRDVADDPQQ------------EEIYNMYNLRDVPPLVHKGRVQVEEAELDEVY

Query:  HNVEEVLLTTQTQSQTGYGSPMTMMPTFGAGYCDSEVGIGYYDAGIGPSSSYMVVGPSTSYMHGQGRGYGEHNEYLYHEAPADVSDQQESQQEPENQEDR
        HNVEEV  TTQTQSQTGYGSPMTMMPTF AGYCD EVGIGYYDAG+GPSSSY+ V PSTSYMHG  RGYGEHNEYLYHEAPADVSD+QE QQEPENQEDR
Subjt:  HNVEEVLLTTQTQSQTGYGSPMTMMPTFGAGYCDSEVGIGYYDAGIGPSSSYMVVGPSTSYMHGQGRGYGEHNEYLYHEAPADVSDQQESQQEPENQEDR

Query:  EQHRV
        EQHRV
Subjt:  EQHRV

A0A5D3CH23 Mediator of RNA polymerase II transcription subunit 12-like isoform X16.4e-6879.31Show/hide
Query:  IGVSIQQFDMDVTQEYIHLYNNIMRLYITRLGAAMGHLRSNNARLRDVADDPQQ------------EEIYNMYNLRDVPPLVHKGRVQVEEAELDEVYHN
        IGVSIQQFD+DVTQEYIH YNNI RLYITR GAA+GHLRSNNARLRDVADDPQQ            EEI+NMY+L  VPP VH+GRV+VEEAELDEVYHN
Subjt:  IGVSIQQFDMDVTQEYIHLYNNIMRLYITRLGAAMGHLRSNNARLRDVADDPQQ------------EEIYNMYNLRDVPPLVHKGRVQVEEAELDEVYHN

Query:  VEEVLLTTQTQSQTGYGSPMTMMPTFGAGYCDSEVGIGYYDAGIGPSSSYMVVGPSTSYMHGQGRGYGEHNEYL
        VEEV  TTQTQSQTGYGSPMTMMPTFGAGY DSEVG GYYDAGI PSS YM VGPS  YMHG  RGYGEHN+YL
Subjt:  VEEVLLTTQTQSQTGYGSPMTMMPTFGAGYCDSEVGIGYYDAGIGPSSSYMVVGPSTSYMHGQGRGYGEHNEYL

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein2.5e-8078.54Show/hide
Query:  MEIGVSIQQFDMDVTQEYIHLYNNIMRLYITRLGAAMGHLRSNNARLRDVADDPQQ------------EEIYNMYNLRDVPPLVHKGRVQVEEAELDEVY
        M I VSIQQFDMDVTQEYIHLYNNI RLYITR GA +GHLRSNNARLRDV +DPQQ            E+I+N+Y+L  VPP VH+ R +VEEAELDEVY
Subjt:  MEIGVSIQQFDMDVTQEYIHLYNNIMRLYITRLGAAMGHLRSNNARLRDVADDPQQ------------EEIYNMYNLRDVPPLVHKGRVQVEEAELDEVY

Query:  HNVEEVLLTTQTQSQTGYGSPMTMMPTFGAGYCDSEVGIGYYDAGIGPSSSYMVVGPSTSYMHGQGRGYGEHNEYLYHEAPADVSDQQESQQEPENQEDR
        HNVEEV  TTQTQSQTGYGSPMTMMPTFGAGYCDSEV IGYYDA +GP SSYM VGPSTSYM+G GRGYGEHNEYLYHEAP DVSD+QE QQEP+NQEDR
Subjt:  HNVEEVLLTTQTQSQTGYGSPMTMMPTFGAGYCDSEVGIGYYDAGIGPSSSYMVVGPSTSYMHGQGRGYGEHNEYLYHEAPADVSDQQESQQEPENQEDR

Query:  EQHRV
        EQHRV
Subjt:  EQHRV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATAGGAGTTTCGATTCAGCAATTTGATATGGATGTGACTCAAGAATACATCCATTTGTATAATAATATTATGAGGCTCTACATCACTCGACTAGGAGCAGCCAT
GGGTCATCTGAGATCGAACAACGCAAGACTTCGTGATGTAGCAGATGATCCACAACAAGAGGAGATATATAATATGTACAATCTACGCGATGTACCTCCACTAGTTCATA
AGGGACGTGTTCAAGTGGAAGAAGCTGAACTCGATGAAGTTTATCATAATGTGGAAGAAGTGCTTCTTACGACACAAACACAGAGCCAAACTGGCTATGGTAGTCCGATG
ACGATGATGCCAACATTTGGAGCAGGATATTGTGATTCTGAGGTCGGTATAGGATATTATGATGCAGGGATCGGTCCATCATCTTCATACATGGTTGTCGGTCCATCAAC
TTCTTACATGCATGGACAAGGACGTGGCTATGGGGAACATAACGAATATCTGTATCATGAAGCACCTGCAGATGTATCAGATCAACAAGAATCCCAACAAGAACCAGAGA
ACCAAGAAGACCGAGAACAACATAGAGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAATAGGAGTTTCGATTCAGCAATTTGATATGGATGTGACTCAAGAATACATCCATTTGTATAATAATATTATGAGGCTCTACATCACTCGACTAGGAGCAGCCAT
GGGTCATCTGAGATCGAACAACGCAAGACTTCGTGATGTAGCAGATGATCCACAACAAGAGGAGATATATAATATGTACAATCTACGCGATGTACCTCCACTAGTTCATA
AGGGACGTGTTCAAGTGGAAGAAGCTGAACTCGATGAAGTTTATCATAATGTGGAAGAAGTGCTTCTTACGACACAAACACAGAGCCAAACTGGCTATGGTAGTCCGATG
ACGATGATGCCAACATTTGGAGCAGGATATTGTGATTCTGAGGTCGGTATAGGATATTATGATGCAGGGATCGGTCCATCATCTTCATACATGGTTGTCGGTCCATCAAC
TTCTTACATGCATGGACAAGGACGTGGCTATGGGGAACATAACGAATATCTGTATCATGAAGCACCTGCAGATGTATCAGATCAACAAGAATCCCAACAAGAACCAGAGA
ACCAAGAAGACCGAGAACAACATAGAGTTTAGAGTCGACATCGACAACCAACTCGAAATCGACGACGTCCGGGTTGTGGAACACATTGA
Protein sequenceShow/hide protein sequence
MEIGVSIQQFDMDVTQEYIHLYNNIMRLYITRLGAAMGHLRSNNARLRDVADDPQQEEIYNMYNLRDVPPLVHKGRVQVEEAELDEVYHNVEEVLLTTQTQSQTGYGSPM
TMMPTFGAGYCDSEVGIGYYDAGIGPSSSYMVVGPSTSYMHGQGRGYGEHNEYLYHEAPADVSDQQESQQEPENQEDREQHRV