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MELO3C025169 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C025169
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionProtein Ycf2-like
Genome locationchr10:8986555..8987080
RNA-Seq ExpressionMELO3C025169
SyntenyMELO3C025169
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045653.1 KNR4/SMI1-like protein 2-like [Cucumis melo var. makuwa]1.8e-1060.47Show/hide
Query:  EPPKENVNVQKKQRIKSLKETESESESEKEEQVEEDKQVEEENDEEGEAETAVDEDSSSSTSQRDERPMDTKKRKKVGEKGTKVST
        E  +E    ++ ++++  ++ E + + E++EQ EEDKQVEEE+DEEGE ETAVDEDSSSSTS++DERPMDTKKRKK  EKG KVST
Subjt:  EPPKENVNVQKKQRIKSLKETESESESEKEEQVEEDKQVEEENDEEGEAETAVDEDSSSSTSQRDERPMDTKKRKKVGEKGTKVST

TYK02608.1 KNR4/SMI1-like protein 2-like [Cucumis melo var. makuwa]1.8e-1060.47Show/hide
Query:  EPPKENVNVQKKQRIKSLKETESESESEKEEQVEEDKQVEEENDEEGEAETAVDEDSSSSTSQRDERPMDTKKRKKVGEKGTKVST
        E  +E    ++ ++++  ++ E + + E++EQ EEDKQVEEE+DEEGE ETAVDEDSSSSTS++DERPMDTKKRKK  EKG KVST
Subjt:  EPPKENVNVQKKQRIKSLKETESESESEKEEQVEEDKQVEEENDEEGEAETAVDEDSSSSTSQRDERPMDTKKRKKVGEKGTKVST

TYK02880.1 protein Ycf2-like [Cucumis melo var. makuwa]2.8e-1159.66Show/hide
Query:  MGERSVTKRESLETSKERGRTEPPKENVNVQKKQRIKSLKETESESESE----KEEQVEED----------KQVEEENDEEGEAETAVDEDSSSSTSQRD
        MGE S  K+ES  TSK+R RTE  KE+VNVQKKQRIKSL++TESESE E    ++E+VEED          KQ EEE DEE E ET+V EDS+SSTS   
Subjt:  MGERSVTKRESLETSKERGRTEPPKENVNVQKKQRIKSLKETESESESE----KEEQVEED----------KQVEEENDEEGEAETAVDEDSSSSTSQRD

Query:  ERPMDTKKRKKVGEKGTKV
          P DTKKR+KV E G KV
Subjt:  ERPMDTKKRKKVGEKGTKV

TYK09769.1 protein Ycf2-like [Cucumis melo var. makuwa]1.8e-1057.39Show/hide
Query:  MGERSVTKRESLETSKERGRTEPPKENVNVQKKQRIKSLKETESESESE---------KEEQVEEDKQVEEENDEEGEAETAVDEDSSSSTSQRDERPMD
        MGE S +K ES ETSK+R RTE  K+ VNVQKKQ+IK  K+TESESE E         +E++ +EDK+ EE+ DEE E ET V EDS+SSTS   + P D
Subjt:  MGERSVTKRESLETSKERGRTEPPKENVNVQKKQRIKSLKETESESESE---------KEEQVEEDKQVEEENDEEGEAETAVDEDSSSSTSQRDERPMD

Query:  TKKRKKVGEKGTKVS
        TKKRKK  EKG K+S
Subjt:  TKKRKKVGEKGTKVS

XP_008462944.1 PREDICTED: KNR4/SMI1 homolog 2-like [Cucumis melo]9.8e-1263.74Show/hide
Query:  GRTEPPKENVNVQKKQRIKSLKETESES----ESEKEEQVEEDKQVEEENDEEGEAETAVDEDSSSSTSQRDERPMDTKKRKKVGEKGTKV
        GRT+  KE+V V+KKQRIKSL+ TESES    + E++EQ E+DK+VEE+N+EEG+ ETAVDEDSSS TS++DERPMD KKRK   +K  KV
Subjt:  GRTEPPKENVNVQKKQRIKSLKETESES----ESEKEEQVEEDKQVEEENDEEGEAETAVDEDSSSSTSQRDERPMDTKKRKKVGEKGTKV

TrEMBL top hitse value%identityAlignment
A0A1S3CI25 KNR4/SMI1 homolog 2-like4.7e-1263.74Show/hide
Query:  GRTEPPKENVNVQKKQRIKSLKETESES----ESEKEEQVEEDKQVEEENDEEGEAETAVDEDSSSSTSQRDERPMDTKKRKKVGEKGTKV
        GRT+  KE+V V+KKQRIKSL+ TESES    + E++EQ E+DK+VEE+N+EEG+ ETAVDEDSSS TS++DERPMD KKRK   +K  KV
Subjt:  GRTEPPKENVNVQKKQRIKSLKETESES----ESEKEEQVEEDKQVEEENDEEGEAETAVDEDSSSSTSQRDERPMDTKKRKKVGEKGTKV

A0A5A7TQ33 KNR4/SMI1-like protein 2-like8.9e-1160.47Show/hide
Query:  EPPKENVNVQKKQRIKSLKETESESESEKEEQVEEDKQVEEENDEEGEAETAVDEDSSSSTSQRDERPMDTKKRKKVGEKGTKVST
        E  +E    ++ ++++  ++ E + + E++EQ EEDKQVEEE+DEEGE ETAVDEDSSSSTS++DERPMDTKKRKK  EKG KVST
Subjt:  EPPKENVNVQKKQRIKSLKETESESESEKEEQVEEDKQVEEENDEEGEAETAVDEDSSSSTSQRDERPMDTKKRKKVGEKGTKVST

A0A5D3BUE9 KNR4/SMI1-like protein 2-like8.9e-1160.47Show/hide
Query:  EPPKENVNVQKKQRIKSLKETESESESEKEEQVEEDKQVEEENDEEGEAETAVDEDSSSSTSQRDERPMDTKKRKKVGEKGTKVST
        E  +E    ++ ++++  ++ E + + E++EQ EEDKQVEEE+DEEGE ETAVDEDSSSSTS++DERPMDTKKRKK  EKG KVST
Subjt:  EPPKENVNVQKKQRIKSLKETESESESEKEEQVEEDKQVEEENDEEGEAETAVDEDSSSSTSQRDERPMDTKKRKKVGEKGTKVST

A0A5D3BUT1 Protein Ycf2-like1.4e-1159.66Show/hide
Query:  MGERSVTKRESLETSKERGRTEPPKENVNVQKKQRIKSLKETESESESE----KEEQVEED----------KQVEEENDEEGEAETAVDEDSSSSTSQRD
        MGE S  K+ES  TSK+R RTE  KE+VNVQKKQRIKSL++TESESE E    ++E+VEED          KQ EEE DEE E ET+V EDS+SSTS   
Subjt:  MGERSVTKRESLETSKERGRTEPPKENVNVQKKQRIKSLKETESESESE----KEEQVEED----------KQVEEENDEEGEAETAVDEDSSSSTSQRD

Query:  ERPMDTKKRKKVGEKGTKV
          P DTKKR+KV E G KV
Subjt:  ERPMDTKKRKKVGEKGTKV

A0A5D3CHM2 Protein Ycf2-like8.9e-1157.39Show/hide
Query:  MGERSVTKRESLETSKERGRTEPPKENVNVQKKQRIKSLKETESESESE---------KEEQVEEDKQVEEENDEEGEAETAVDEDSSSSTSQRDERPMD
        MGE S +K ES ETSK+R RTE  K+ VNVQKKQ+IK  K+TESESE E         +E++ +EDK+ EE+ DEE E ET V EDS+SSTS   + P D
Subjt:  MGERSVTKRESLETSKERGRTEPPKENVNVQKKQRIKSLKETESESESE---------KEEQVEEDKQVEEENDEEGEAETAVDEDSSSSTSQRDERPMD

Query:  TKKRKKVGEKGTKVS
        TKKRKK  EKG K+S
Subjt:  TKKRKKVGEKGTKVS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGAGAGATCGGTGACCAAGCGAGAGAGTCTAGAAACTTCAAAAGAGAGGGGGAGGACTGAACCCCCAAAAGAAAACGTCAATGTACAGAAGAAACAAAGG
ATAAAAAGCTTGAAAGAAACTGAAAGCGAAAGCGAAAGCGAAAAGGAGGAACAAGTAGAAGAAGATAAACAAGTAGAAGAAGAAAATGATGAAGAAGGGGAAGCT
GAGACAGCAGTAGATGAAGATTCGAGTTCATCGACGAGTCAACGAGATGAAAGACCAATGGATACTAAGAAGAGAAAAAAGGTTGGGGAAAAGGGAACGAAAGTA
AGCACATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGAGAGATCGGTGACCAAGCGAGAGAGTCTAGAAACTTCAAAAGAGAGGGGGAGGACTGAACCCCCAAAAGAAAACGTCAATGTACAGAAGAAACAAAGG
ATAAAAAGCTTGAAAGAAACTGAAAGCGAAAGCGAAAGCGAAAAGGAGGAACAAGTAGAAGAAGATAAACAAGTAGAAGAAGAAAATGATGAAGAAGGGGAAGCT
GAGACAGCAGTAGATGAAGATTCGAGTTCATCGACGAGTCAACGAGATGAAAGACCAATGGATACTAAGAAGAGAAAAAAGGTTGGGGAAAAGGGAACGAAAGTA
AGCACATAA
Protein sequenceShow/hide protein sequence
MGERSVTKRESLETSKERGRTEPPKENVNVQKKQRIKSLKETESESESEKEEQVEEDKQVEEENDEEGEAETAVDEDSSSSTSQRDERPMDTKKRKKVGEKGTKV
ST