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MELO3C025329 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C025329
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionRetrotransposon protein
Genome locationchr02:19349007..19349387
RNA-Seq ExpressionMELO3C025329
SyntenyMELO3C025329
Gene Ontology termsGO:0006623 - protein targeting to vacuole (biological process)
GO:0016192 - vesicle-mediated transport (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033884.1 retrotransposon protein [Cucumis melo var. makuwa]1.5e-4373.81Show/hide
Query:  MRLHPATKGLLNKSFYYYDKLAYVFERDRATGRFIETFADIGSNEHAEYEGFDMSDGNDMKFPSMYSQGIDMSQDDVRASRPAHVSDGKPGSSRSKRKRE
        +R HPA K LLNK F YYD+LAYVFE DRATGRF+ETFADIGSNE A YEGFDMSDGND++FP MYSQGID+SQDDVR S+PA  SDG+  SS SKRKR 
Subjt:  MRLHPATKGLLNKSFYYYDKLAYVFERDRATGRFIETFADIGSNEHAEYEGFDMSDGNDMKFPSMYSQGIDMSQDDVRASRPAHVSDGKPGSSRSKRKRE

Query:  SQWEGKIDMIHMVLECMNDQLKTIVE
        SQ EG++D+I+M L+CMNDQL+TI+E
Subjt:  SQWEGKIDMIHMVLECMNDQLKTIVE

KAA0046602.1 retrotransposon protein [Cucumis melo var. makuwa]2.5e-5198.1Show/hide
Query:  LHPATKGLLNKSFYYYDKLAYVFERDRATGRFIETFADIGSNEHAEYEGFDMSDGNDMKFPSMYSQGIDMSQDDVRASRPAHVSDGKPGSSRSKRKRESQ
        LHPATKGLLNKSFYYYDKLAYVFERDRATGRFIETFADIGSNEHAEYEGFDMSDGNDMKFPSMYSQGIDMSQDDVRASRPAHVSDGKPGSSRSKRKRESQ
Subjt:  LHPATKGLLNKSFYYYDKLAYVFERDRATGRFIETFADIGSNEHAEYEGFDMSDGNDMKFPSMYSQGIDMSQDDVRASRPAHVSDGKPGSSRSKRKRESQ

Query:  WEGKI
        WEG++
Subjt:  WEGKI

KAA0050806.1 retrotransposon protein [Cucumis melo var. makuwa]5.0e-3969.05Show/hide
Query:  MRLHPATKGLLNKSFYYYDKLAYVFERDRATGRFIETFADIGSNEHAEYEGFDMSDGNDMKFPSMYSQGIDMSQDDVRASRPAHVSDGKPGSSRSKRKRE
        M+ HP  KGLLNKSF YYD+LAY+F+RDR T RFIETF DIGSNE   YEGF+MSDGN+ +F S+YSQGIDMSQ+DV AS+PAH S+ +  SSR KRKR 
Subjt:  MRLHPATKGLLNKSFYYYDKLAYVFERDRATGRFIETFADIGSNEHAEYEGFDMSDGNDMKFPSMYSQGIDMSQDDVRASRPAHVSDGKPGSSRSKRKRE

Query:  SQWEGKIDMIHMVLECMNDQLKTIVE
        SQ +G+I +IHM L+CMNDQLK IVE
Subjt:  SQWEGKIDMIHMVLECMNDQLKTIVE

KAA0055946.1 retrotransposon protein [Cucumis melo var. makuwa]1.0e-4476.98Show/hide
Query:  MRLHPATKGLLNKSFYYYDKLAYVFERDRATGRFIETFADIGSNEHAEYEGFDMSDGNDMKFPSMYSQGIDMSQDDVRASRPAHVSDGKPGSSRSKRKRE
        M+ HPA KGLLNK F YYD+LAYVF RDRATG+F ETF DI SNE A YEGFDMSD NDM+FP MYSQ I MSQDDVRASRP  VSD + GSS SKRKRE
Subjt:  MRLHPATKGLLNKSFYYYDKLAYVFERDRATGRFIETFADIGSNEHAEYEGFDMSDGNDMKFPSMYSQGIDMSQDDVRASRPAHVSDGKPGSSRSKRKRE

Query:  SQWEGKIDMIHMVLECMNDQLKTIVE
        SQWEG+I+MIHM LEC NDQL+TIVE
Subjt:  SQWEGKIDMIHMVLECMNDQLKTIVE

KAA0067019.1 retrotransposon protein [Cucumis melo var. makuwa]8.5e-3965.08Show/hide
Query:  MRLHPATKGLLNKSFYYYDKLAYVFERDRATGRFIETFADIGSNEHAEYEGFDMSDGNDMKFPSMYSQGIDMSQDDVRASRPAHVSDGKPGSSRSKRKRE
        M+ HP  KGLLNKSF YYD+LAYVF RDR  G F+ETF D+GSN+ + YEGF  +DGND +FPSMYSQG DMSQDDVRAS PA  S+ + GS+ SK++RE
Subjt:  MRLHPATKGLLNKSFYYYDKLAYVFERDRATGRFIETFADIGSNEHAEYEGFDMSDGNDMKFPSMYSQGIDMSQDDVRASRPAHVSDGKPGSSRSKRKRE

Query:  SQWEGKIDMIHMVLECMNDQLKTIVE
         QW G+I+MIH  LEC NDQL+ I E
Subjt:  SQWEGKIDMIHMVLECMNDQLKTIVE

TrEMBL top hitse value%identityAlignment
A0A5A7TT49 Retrotransposon protein1.2e-5198.1Show/hide
Query:  LHPATKGLLNKSFYYYDKLAYVFERDRATGRFIETFADIGSNEHAEYEGFDMSDGNDMKFPSMYSQGIDMSQDDVRASRPAHVSDGKPGSSRSKRKRESQ
        LHPATKGLLNKSFYYYDKLAYVFERDRATGRFIETFADIGSNEHAEYEGFDMSDGNDMKFPSMYSQGIDMSQDDVRASRPAHVSDGKPGSSRSKRKRESQ
Subjt:  LHPATKGLLNKSFYYYDKLAYVFERDRATGRFIETFADIGSNEHAEYEGFDMSDGNDMKFPSMYSQGIDMSQDDVRASRPAHVSDGKPGSSRSKRKRESQ

Query:  WEGKI
        WEG++
Subjt:  WEGKI

A0A5A7U9D5 Retrotransposon protein2.4e-3969.05Show/hide
Query:  MRLHPATKGLLNKSFYYYDKLAYVFERDRATGRFIETFADIGSNEHAEYEGFDMSDGNDMKFPSMYSQGIDMSQDDVRASRPAHVSDGKPGSSRSKRKRE
        M+ HP  KGLLNKSF YYD+LAY+F+RDR T RFIETF DIGSNE   YEGF+MSDGN+ +F S+YSQGIDMSQ+DV AS+PAH S+ +  SSR KRKR 
Subjt:  MRLHPATKGLLNKSFYYYDKLAYVFERDRATGRFIETFADIGSNEHAEYEGFDMSDGNDMKFPSMYSQGIDMSQDDVRASRPAHVSDGKPGSSRSKRKRE

Query:  SQWEGKIDMIHMVLECMNDQLKTIVE
        SQ +G+I +IHM L+CMNDQLK IVE
Subjt:  SQWEGKIDMIHMVLECMNDQLKTIVE

A0A5D3BQI7 Retrotransposon protein7.2e-4473.81Show/hide
Query:  MRLHPATKGLLNKSFYYYDKLAYVFERDRATGRFIETFADIGSNEHAEYEGFDMSDGNDMKFPSMYSQGIDMSQDDVRASRPAHVSDGKPGSSRSKRKRE
        +R HPA K LLNK F YYD+LAYVFE DRATGRF+ETFADIGSNE A YEGFDMSDGND++FP MYSQGID+SQDDVR S+PA  SDG+  SS SKRKR 
Subjt:  MRLHPATKGLLNKSFYYYDKLAYVFERDRATGRFIETFADIGSNEHAEYEGFDMSDGNDMKFPSMYSQGIDMSQDDVRASRPAHVSDGKPGSSRSKRKRE

Query:  SQWEGKIDMIHMVLECMNDQLKTIVE
        SQ EG++D+I+M L+CMNDQL+TI+E
Subjt:  SQWEGKIDMIHMVLECMNDQLKTIVE

A0A5D3DS68 Retrotransposon protein4.1e-3965.08Show/hide
Query:  MRLHPATKGLLNKSFYYYDKLAYVFERDRATGRFIETFADIGSNEHAEYEGFDMSDGNDMKFPSMYSQGIDMSQDDVRASRPAHVSDGKPGSSRSKRKRE
        M+ HP  KGLLNKSF YYD+LAYVF RDR  G F+ETF D+GSN+ + YEGF  +DGND +FPSMYSQG DMSQDDVRAS PA  S+ + GS+ SK++RE
Subjt:  MRLHPATKGLLNKSFYYYDKLAYVFERDRATGRFIETFADIGSNEHAEYEGFDMSDGNDMKFPSMYSQGIDMSQDDVRASRPAHVSDGKPGSSRSKRKRE

Query:  SQWEGKIDMIHMVLECMNDQLKTIVE
         QW G+I+MIH  LEC NDQL+ I E
Subjt:  SQWEGKIDMIHMVLECMNDQLKTIVE

A0A5D3DXB2 Retrotransposon protein5.0e-4576.98Show/hide
Query:  MRLHPATKGLLNKSFYYYDKLAYVFERDRATGRFIETFADIGSNEHAEYEGFDMSDGNDMKFPSMYSQGIDMSQDDVRASRPAHVSDGKPGSSRSKRKRE
        M+ HPA KGLLNK F YYD+LAYVF RDRATG+F ETF DI SNE A YEGFDMSD NDM+FP MYSQ I MSQDDVRASRP  VSD + GSS SKRKRE
Subjt:  MRLHPATKGLLNKSFYYYDKLAYVFERDRATGRFIETFADIGSNEHAEYEGFDMSDGNDMKFPSMYSQGIDMSQDDVRASRPAHVSDGKPGSSRSKRKRE

Query:  SQWEGKIDMIHMVLECMNDQLKTIVE
        SQWEG+I+MIHM LEC NDQL+TIVE
Subjt:  SQWEGKIDMIHMVLECMNDQLKTIVE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGTTGCATCCTGCAACGAAGGGCCTCCTTAACAAATCCTTTTACTATTACGACAAACTTGCATATGTGTTCGAGAGGGATAGAGCGACGGGTCGCTTTATAGAGAC
CTTCGCCGACATCGGGTCTAATGAGCATGCCGAGTATGAGGGGTTTGACATGTCGGATGGGAACGATATGAAGTTTCCATCCATGTACAGCCAAGGGATTGACATGTCCC
AGGATGATGTACGCGCATCACGACCCGCTCACGTGTCAGATGGTAAACCCGGATCGAGTAGATCTAAGAGAAAGAGGGAAAGCCAGTGGGAGGGTAAGATTGACATGATA
CATATGGTCCTGGAGTGTATGAATGACCAACTCAAGACCATAGTCGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGGTTGCATCCTGCAACGAAGGGCCTCCTTAACAAATCCTTTTACTATTACGACAAACTTGCATATGTGTTCGAGAGGGATAGAGCGACGGGTCGCTTTATAGAGAC
CTTCGCCGACATCGGGTCTAATGAGCATGCCGAGTATGAGGGGTTTGACATGTCGGATGGGAACGATATGAAGTTTCCATCCATGTACAGCCAAGGGATTGACATGTCCC
AGGATGATGTACGCGCATCACGACCCGCTCACGTGTCAGATGGTAAACCCGGATCGAGTAGATCTAAGAGAAAGAGGGAAAGCCAGTGGGAGGGTAAGATTGACATGATA
CATATGGTCCTGGAGTGTATGAATGACCAACTCAAGACCATAGTCGAGTGA
Protein sequenceShow/hide protein sequence
MRLHPATKGLLNKSFYYYDKLAYVFERDRATGRFIETFADIGSNEHAEYEGFDMSDGNDMKFPSMYSQGIDMSQDDVRASRPAHVSDGKPGSSRSKRKRESQWEGKIDMI
HMVLECMNDQLKTIVE