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MELO3C025868 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C025868
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionPeptidyl-prolyl cis-trans isomerase
Genome locationchr11:20446546..20446856
RNA-Seq ExpressionMELO3C025868
SyntenyMELO3C025868
Gene Ontology termsGO:0000413 - protein peptidyl-prolyl isomerization (biological process)
GO:0000911 - cytokinesis by cell plate formation (biological process)
GO:0006457 - protein folding (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity (molecular function)
GO:0016018 - cyclosporin A binding (molecular function)
InterPro domainsIPR029000 - Cyclophilin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061849.1 photosynthetic NDH subunit of lumenal location 5 [Cucumis melo var. makuwa]5.4e-26100Show/hide
Query:  VPPLQEKVANKVYFDVSIGNPVGKLAGRIVIDVPKTAENFRALCTGEKGFGFKGSTPFIV
        VPPLQEKVANKVYFDVSIGNPVGKLAGRIVIDVPKTAENFRALCTGEKGFGFKGSTPFIV
Subjt:  VPPLQEKVANKVYFDVSIGNPVGKLAGRIVIDVPKTAENFRALCTGEKGFGFKGSTPFIV

XP_004140542.1 photosynthetic NDH subunit of lumenal location 5, chloroplastic [Cucumis sativus]7.6e-2088.33Show/hide
Query:  VPPLQEKVANKVYFDVSIGNPVGKLAGRIVI-----DVPKTAENFRALCTGEKGFGFKGS
        VPPLQ KV NKVYFDVSIGNPVGKLAGRIVI     DVPKTAENFRALCTGEKGFGFKGS
Subjt:  VPPLQEKVANKVYFDVSIGNPVGKLAGRIVI-----DVPKTAENFRALCTGEKGFGFKGS

XP_008459881.1 PREDICTED: photosynthetic NDH subunit of lumenal location 5, chloroplastic [Cucumis melo]7.6e-2088.33Show/hide
Query:  VPPLQEKVANKVYFDVSIGNPVGKLAGRIVI-----DVPKTAENFRALCTGEKGFGFKGS
        VPPLQ KV NKVYFDVSIGNPVGKLAGRIVI     DVPKTAENFRALCTGEKGFGFKGS
Subjt:  VPPLQEKVANKVYFDVSIGNPVGKLAGRIVI-----DVPKTAENFRALCTGEKGFGFKGS

XP_010090669.1 photosynthetic NDH subunit of lumenal location 5, chloroplastic [Morus notabilis]1.1e-1881.97Show/hide
Query:  VPPLQEKVANKVYFDVSIGNPVGKLAGRIVI-----DVPKTAENFRALCTGEKGFGFKGST
        V PLQ KV NKVYFD+SIGNPVGKLAGRIVI     DVP+TAENFRALCTGEKGFG+KGST
Subjt:  VPPLQEKVANKVYFDVSIGNPVGKLAGRIVI-----DVPKTAENFRALCTGEKGFGFKGST

XP_038875935.1 photosynthetic NDH subunit of lumenal location 5, chloroplastic [Benincasa hispida]7.6e-2088.33Show/hide
Query:  VPPLQEKVANKVYFDVSIGNPVGKLAGRIVI-----DVPKTAENFRALCTGEKGFGFKGS
        VPPLQ KV NKVYFDVSIGNPVGKLAGRIVI     DVPKTAENFRALCTGEKGFGFKGS
Subjt:  VPPLQEKVANKVYFDVSIGNPVGKLAGRIVI-----DVPKTAENFRALCTGEKGFGFKGS

TrEMBL top hitse value%identityAlignment
A0A0A0KAE0 Peptidyl-prolyl cis-trans isomerase3.7e-2088.33Show/hide
Query:  VPPLQEKVANKVYFDVSIGNPVGKLAGRIVI-----DVPKTAENFRALCTGEKGFGFKGS
        VPPLQ KV NKVYFDVSIGNPVGKLAGRIVI     DVPKTAENFRALCTGEKGFGFKGS
Subjt:  VPPLQEKVANKVYFDVSIGNPVGKLAGRIVI-----DVPKTAENFRALCTGEKGFGFKGS

A0A1S3CBN7 Peptidyl-prolyl cis-trans isomerase3.7e-2088.33Show/hide
Query:  VPPLQEKVANKVYFDVSIGNPVGKLAGRIVI-----DVPKTAENFRALCTGEKGFGFKGS
        VPPLQ KV NKVYFDVSIGNPVGKLAGRIVI     DVPKTAENFRALCTGEKGFGFKGS
Subjt:  VPPLQEKVANKVYFDVSIGNPVGKLAGRIVI-----DVPKTAENFRALCTGEKGFGFKGS

A0A5D3CTY6 Photosynthetic NDH subunit of lumenal location 52.6e-26100Show/hide
Query:  VPPLQEKVANKVYFDVSIGNPVGKLAGRIVIDVPKTAENFRALCTGEKGFGFKGSTPFIV
        VPPLQEKVANKVYFDVSIGNPVGKLAGRIVIDVPKTAENFRALCTGEKGFGFKGSTPFIV
Subjt:  VPPLQEKVANKVYFDVSIGNPVGKLAGRIVIDVPKTAENFRALCTGEKGFGFKGSTPFIV

A0A5D3DM20 Peptidyl-prolyl cis-trans isomerase3.7e-2088.33Show/hide
Query:  VPPLQEKVANKVYFDVSIGNPVGKLAGRIVI-----DVPKTAENFRALCTGEKGFGFKGS
        VPPLQ KV NKVYFDVSIGNPVGKLAGRIVI     DVPKTAENFRALCTGEKGFGFKGS
Subjt:  VPPLQEKVANKVYFDVSIGNPVGKLAGRIVI-----DVPKTAENFRALCTGEKGFGFKGS

W9QW97 Peptidyl-prolyl cis-trans isomerase5.3e-1981.97Show/hide
Query:  VPPLQEKVANKVYFDVSIGNPVGKLAGRIVI-----DVPKTAENFRALCTGEKGFGFKGST
        V PLQ KV NKVYFD+SIGNPVGKLAGRIVI     DVP+TAENFRALCTGEKGFG+KGST
Subjt:  VPPLQEKVANKVYFDVSIGNPVGKLAGRIVI-----DVPKTAENFRALCTGEKGFGFKGST

SwissProt top hitse value%identityAlignment
P14088 Peptidyl-prolyl cis-trans isomerase3.9e-1171.43Show/hide
Query:  KVYFDVSIGNPVGKLAGRIVI----DVPKTAENFRALCTGEKGFGFKGS
        K +FD+SIG   GK AGRIV     DVPKT ENFRALCTGEKGFG+KGS
Subjt:  KVYFDVSIGNPVGKLAGRIVI----DVPKTAENFRALCTGEKGFGFKGS

P14832 Peptidyl-prolyl cis-trans isomerase9.7e-1062.75Show/hide
Query:  NKVYFDVSI-GNPVGKLAGRIVID-VPKTAENFRALCTGEKGFGFKGSTPF
        ++VYFDV   G P+G++  ++  D VPKTAENFRALCTGEKGFG+ GS PF
Subjt:  NKVYFDVSI-GNPVGKLAGRIVID-VPKTAENFRALCTGEKGFGFKGSTPF

P34791 Peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic2.7e-1264.91Show/hide
Query:  QEKVANKVYFDVSIGNPVGKLAGRIVID-----VPKTAENFRALCTGEKGFGFKGST
        Q KV NKVYFDV IG   G++AGRIV+      VPKT ENFRALCTGEK +G+KGS+
Subjt:  QEKVANKVYFDVSIGNPVGKLAGRIVID-----VPKTAENFRALCTGEKGFGFKGST

P54985 Peptidyl-prolyl cis-trans isomerase9.7e-1065.96Show/hide
Query:  KVYFDVSI-GNPVGKLAGRIVID-VPKTAENFRALCTGEKGFGFKGS
        +V+FD+S  G PVG++   +  D VPKTAENFRALCTGEKGFG+KGS
Subjt:  KVYFDVSI-GNPVGKLAGRIVID-VPKTAENFRALCTGEKGFGFKGS

Q9ASS6 Photosynthetic NDH subunit of lumenal location 5, chloroplastic5.1e-1970.31Show/hide
Query:  ATLVPPLQEKVANKVYFDVSIGNPVGKLAGRIVI-----DVPKTAENFRALCTGEKGFGFKGST
        A +V   Q K+ +KVYFD+S+GNPVGKLAGRIVI     DVP+T ENFRALCTGEKGFG+KGST
Subjt:  ATLVPPLQEKVANKVYFDVSIGNPVGKLAGRIVI-----DVPKTAENFRALCTGEKGFGFKGST

Arabidopsis top hitse value%identityAlignment
AT3G62030.1 rotamase CYP 41.9e-1364.91Show/hide
Query:  QEKVANKVYFDVSIGNPVGKLAGRIVID-----VPKTAENFRALCTGEKGFGFKGST
        Q KV NKVYFDV IG   G++AGRIV+      VPKT ENFRALCTGEK +G+KGS+
Subjt:  QEKVANKVYFDVSIGNPVGKLAGRIVID-----VPKTAENFRALCTGEKGFGFKGST

AT3G62030.2 rotamase CYP 41.9e-1364.91Show/hide
Query:  QEKVANKVYFDVSIGNPVGKLAGRIVID-----VPKTAENFRALCTGEKGFGFKGST
        Q KV NKVYFDV IG   G++AGRIV+      VPKT ENFRALCTGEK +G+KGS+
Subjt:  QEKVANKVYFDVSIGNPVGKLAGRIVID-----VPKTAENFRALCTGEKGFGFKGST

AT3G62030.3 rotamase CYP 41.9e-1364.91Show/hide
Query:  QEKVANKVYFDVSIGNPVGKLAGRIVID-----VPKTAENFRALCTGEKGFGFKGST
        Q KV NKVYFDV IG   G++AGRIV+      VPKT ENFRALCTGEK +G+KGS+
Subjt:  QEKVANKVYFDVSIGNPVGKLAGRIVID-----VPKTAENFRALCTGEKGFGFKGST

AT5G13120.1 cyclophilin 20-23.6e-2070.31Show/hide
Query:  ATLVPPLQEKVANKVYFDVSIGNPVGKLAGRIVI-----DVPKTAENFRALCTGEKGFGFKGST
        A +V   Q K+ +KVYFD+S+GNPVGKLAGRIVI     DVP+T ENFRALCTGEKGFG+KGST
Subjt:  ATLVPPLQEKVANKVYFDVSIGNPVGKLAGRIVI-----DVPKTAENFRALCTGEKGFGFKGST

AT5G13120.2 cyclophilin 20-23.6e-2070.31Show/hide
Query:  ATLVPPLQEKVANKVYFDVSIGNPVGKLAGRIVI-----DVPKTAENFRALCTGEKGFGFKGST
        A +V   Q K+ +KVYFD+S+GNPVGKLAGRIVI     DVP+T ENFRALCTGEKGFG+KGST
Subjt:  ATLVPPLQEKVANKVYFDVSIGNPVGKLAGRIVI-----DVPKTAENFRALCTGEKGFGFKGST


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACATTGGTACCTCCTTTACAAGAGAAAGTTGCAAACAAGGTGTATTTTGATGTTAGTATTGGTAATCCAGTAGGGAAGCTTGCTGGGAGGATTGTGATT
GATGTCCCCAAAACGGCAGAGAATTTCCGTGCTCTTTGCACAGGAGAGAAGGGCTTTGGATTCAAAGGTTCTACACCTTTCATCGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGACATTGGTACCTCCTTTACAAGAGAAAGTTGCAAACAAGGTGTATTTTGATGTTAGTATTGGTAATCCAGTAGGGAAGCTTGCTGGGAGGATTGTGATT
GATGTCCCCAAAACGGCAGAGAATTTCCGTGCTCTTTGCACAGGAGAGAAGGGCTTTGGATTCAAAGGTTCTACACCTTTCATCGTGTAA
Protein sequenceShow/hide protein sequence
MATLVPPLQEKVANKVYFDVSIGNPVGKLAGRIVIDVPKTAENFRALCTGEKGFGFKGSTPFIV