CuGenDBv2

Gene ID	MELO3C026013
Organism	Cucumis melo DHL92 (Melon (DHL92) v4)
Description	kinetochore protein SPC24 homolog
Genome location	chr08:27827917..27834421
RNA-Seq Expression	MELO3C026013
Synteny	MELO3C026013
Gene Ontology terms	GO:0051983 - regulation of chromosome segregation (biological process)
InterPro domains	IPR044951 - Kinetochore protein SPC24-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0037730.1 uncharacterized protein E6C27_scaffold141G00230 [Cucumis melo var. makuwa]

3.1e-50

100

Show/hide

Query:  MGDFATNSNIEELASFADDLVAILKDPTDVHNLNQCLEHFKTLQSSCDDDFNSVQSSVEDYEKKIKACREKTEEAKANTVADDEMEILEKELEEEVGKGH
        MGDFATNSNIEELASFADDLVAILKDPTDVHNLNQCLEHFKTLQSSCDDDFNSVQSSVEDYEKKIKACREKTEEAKANTVADDEMEILEKELEEEVGKGH
Subjt:  MGDFATNSNIEELASFADDLVAILKDPTDVHNLNQCLEHFKTLQSSCDDDFNSVQSSVEDYEKKIKACREKTEEAKANTVADDEMEILEKELEEEVGKGH

Query:  LLMEEIR
        LLMEEIR
Subjt:  LLMEEIR

XP_004148609.1 kinetochore protein SPC24 homolog [Cucumis sativus]

3.8e-48

96.26

Show/hide

Query:  MGDFATNSNIEELASFADDLVAILKDPTDVHNLNQCLEHFKTLQSSCDDDFNSVQSSVEDYEKKIKACREKTEEAKANTVADDEMEILEKELEEEVGKGH
        MGDFATNSNIEELASFADDLVAILKDPTDV NLNQCLEHFKTLQSSCDDDF SVQSS+EDYEKKIKACREKTEEAKANTVADDEMEILEKELEEE+GKGH
Subjt:  MGDFATNSNIEELASFADDLVAILKDPTDVHNLNQCLEHFKTLQSSCDDDFNSVQSSVEDYEKKIKACREKTEEAKANTVADDEMEILEKELEEEVGKGH

Query:  LLMEEIR
        LLMEEIR
Subjt:  LLMEEIR

XP_008464222.1 PREDICTED: uncharacterized protein LOC103502153 [Cucumis melo]

3.1e-50

100

Show/hide

Query:  MGDFATNSNIEELASFADDLVAILKDPTDVHNLNQCLEHFKTLQSSCDDDFNSVQSSVEDYEKKIKACREKTEEAKANTVADDEMEILEKELEEEVGKGH
        MGDFATNSNIEELASFADDLVAILKDPTDVHNLNQCLEHFKTLQSSCDDDFNSVQSSVEDYEKKIKACREKTEEAKANTVADDEMEILEKELEEEVGKGH
Subjt:  MGDFATNSNIEELASFADDLVAILKDPTDVHNLNQCLEHFKTLQSSCDDDFNSVQSSVEDYEKKIKACREKTEEAKANTVADDEMEILEKELEEEVGKGH

Query:  LLMEEIR
        LLMEEIR
Subjt:  LLMEEIR

XP_022978290.1 uncharacterized protein LOC111478320 [Cucurbita maxima]

2.8e-35

75.7

Show/hide

Query:  MGDFATNSNIEELASFADDLVAILKDPTDVHNLNQCLEHFKTLQSSCDDDFNSVQSSVEDYEKKIKACREKTEEAKANTVADDEMEILEKELEEEVGKGH
        M DFA   NIEE+ S+ DDLVA+L D  DV  LNQCLEHFKTLQSSC DDF++VQSSV+DYEKKI+ACR+KTEEAKA+TVADDE++ILEKEL EE+GKG+
Subjt:  MGDFATNSNIEELASFADDLVAILKDPTDVHNLNQCLEHFKTLQSSCDDDFNSVQSSVEDYEKKIKACREKTEEAKANTVADDEMEILEKELEEEVGKGH

Query:  LLMEEIR
        LLMEEIR
Subjt:  LLMEEIR

XP_038883770.1 kinetochore protein SPC24 homolog [Benincasa hispida]

1.1e-39

82.24

Show/hide

Query:  MGDFATNSNIEELASFADDLVAILKDPTDVHNLNQCLEHFKTLQSSCDDDFNSVQSSVEDYEKKIKACREKTEEAKANTVADDEMEILEKELEEEVGKGH
        MGDF + SNIE   SFADDLVA+LKDP DV +LNQCLEHFK LQSSCDDDF+SVQS V+DYEKKIKAC++KTEEAKANTV DDEM ILEKEL+EEVGKGH
Subjt:  MGDFATNSNIEELASFADDLVAILKDPTDVHNLNQCLEHFKTLQSSCDDDFNSVQSSVEDYEKKIKACREKTEEAKANTVADDEMEILEKELEEEVGKGH

Query:  LLMEEIR
        LLMEEIR
Subjt:  LLMEEIR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L002 Uncharacterized protein

1.8e-48

96.26

Show/hide

Query:  MGDFATNSNIEELASFADDLVAILKDPTDVHNLNQCLEHFKTLQSSCDDDFNSVQSSVEDYEKKIKACREKTEEAKANTVADDEMEILEKELEEEVGKGH
        MGDFATNSNIEELASFADDLVAILKDPTDV NLNQCLEHFKTLQSSCDDDF SVQSS+EDYEKKIKACREKTEEAKANTVADDEMEILEKELEEE+GKGH
Subjt:  MGDFATNSNIEELASFADDLVAILKDPTDVHNLNQCLEHFKTLQSSCDDDFNSVQSSVEDYEKKIKACREKTEEAKANTVADDEMEILEKELEEEVGKGH

Query:  LLMEEIR
        LLMEEIR
Subjt:  LLMEEIR

A0A1S3CKZ4 uncharacterized protein LOC103502153

1.5e-50

100

Show/hide

Query:  MGDFATNSNIEELASFADDLVAILKDPTDVHNLNQCLEHFKTLQSSCDDDFNSVQSSVEDYEKKIKACREKTEEAKANTVADDEMEILEKELEEEVGKGH
        MGDFATNSNIEELASFADDLVAILKDPTDVHNLNQCLEHFKTLQSSCDDDFNSVQSSVEDYEKKIKACREKTEEAKANTVADDEMEILEKELEEEVGKGH
Subjt:  MGDFATNSNIEELASFADDLVAILKDPTDVHNLNQCLEHFKTLQSSCDDDFNSVQSSVEDYEKKIKACREKTEEAKANTVADDEMEILEKELEEEVGKGH

Query:  LLMEEIR
        LLMEEIR
Subjt:  LLMEEIR

A0A5D3CGK0 Uncharacterized protein

1.5e-50

100

Show/hide

Query:  MGDFATNSNIEELASFADDLVAILKDPTDVHNLNQCLEHFKTLQSSCDDDFNSVQSSVEDYEKKIKACREKTEEAKANTVADDEMEILEKELEEEVGKGH
        MGDFATNSNIEELASFADDLVAILKDPTDVHNLNQCLEHFKTLQSSCDDDFNSVQSSVEDYEKKIKACREKTEEAKANTVADDEMEILEKELEEEVGKGH
Subjt:  MGDFATNSNIEELASFADDLVAILKDPTDVHNLNQCLEHFKTLQSSCDDDFNSVQSSVEDYEKKIKACREKTEEAKANTVADDEMEILEKELEEEVGKGH

Query:  LLMEEIR
        LLMEEIR
Subjt:  LLMEEIR

A0A6J1GFS1 uncharacterized protein LOC111453528

1.2e-34

73.83

Show/hide

Query:  MGDFATNSNIEELASFADDLVAILKDPTDVHNLNQCLEHFKTLQSSCDDDFNSVQSSVEDYEKKIKACREKTEEAKANTVADDEMEILEKELEEEVGKGH
        M DFA   NIEEL S+ DDLVA+L D  DV  LNQCLEHFKTLQSSC DDF++VQSSV+DYEKKI+ACR+KTEEA+ +TV+DDE++ILEKEL EE+GKG+
Subjt:  MGDFATNSNIEELASFADDLVAILKDPTDVHNLNQCLEHFKTLQSSCDDDFNSVQSSVEDYEKKIKACREKTEEAKANTVADDEMEILEKELEEEVGKGH

Query:  LLMEEIR
        LLMEEIR
Subjt:  LLMEEIR

A0A6J1IPN8 uncharacterized protein LOC111478320

1.4e-35

75.7

Show/hide

Query:  MGDFATNSNIEELASFADDLVAILKDPTDVHNLNQCLEHFKTLQSSCDDDFNSVQSSVEDYEKKIKACREKTEEAKANTVADDEMEILEKELEEEVGKGH
        M DFA   NIEE+ S+ DDLVA+L D  DV  LNQCLEHFKTLQSSC DDF++VQSSV+DYEKKI+ACR+KTEEAKA+TVADDE++ILEKEL EE+GKG+
Subjt:  MGDFATNSNIEELASFADDLVAILKDPTDVHNLNQCLEHFKTLQSSCDDDFNSVQSSVEDYEKKIKACREKTEEAKANTVADDEMEILEKELEEEVGKGH

Query:  LLMEEIR
        LLMEEIR
Subjt:  LLMEEIR

SwissProt top hits

e value

%identity

Alignment

Q67XT3 Kinetochore protein SPC24 homolog

1.0e-16

42.06

Show/hide

Query:  MGDFATNSNIEELASFADDLVAILKDPTDVHNLNQCLEHFKTLQSSCDDDFNSVQSSVEDYEKKIKACREKTEEAKANTVADDEMEILEKELEEEVGKGH
        MG+ + N +IE+L S+ DDL+ +L        ++Q  E FK L  +C +DFN +Q S+ED + K+ AC++KTEEA ++  A+DE+E L+KEL+EE+ +  
Subjt:  MGDFATNSNIEELASFADDLVAILKDPTDVHNLNQCLEHFKTLQSSCDDDFNSVQSSVEDYEKKIKACREKTEEAKANTVADDEMEILEKELEEEVGKGH

Query:  LLMEEIR
         L +E+R
Subjt:  LLMEEIR

Arabidopsis top hits

e value

%identity

Alignment

AT3G08880.1 unknown protein

7.5e-18

42.06

Show/hide

Query:  MGDFATNSNIEELASFADDLVAILKDPTDVHNLNQCLEHFKTLQSSCDDDFNSVQSSVEDYEKKIKACREKTEEAKANTVADDEMEILEKELEEEVGKGH
        MG+ + N +IE+L S+ DDL+ +L        ++Q  E FK L  +C +DFN +Q S+ED + K+ AC++KTEEA ++  A+DE+E L+KEL+EE+ +  
Subjt:  MGDFATNSNIEELASFADDLVAILKDPTDVHNLNQCLEHFKTLQSSCDDDFNSVQSSVEDYEKKIKACREKTEEAKANTVADDEMEILEKELEEEVGKGH

Query:  LLMEEIR
         L +E+R
Subjt:  LLMEEIR

AT5G01570.1 unknown protein

2.5e-13

38.38

Show/hide

Query:  NIEELASFADDLVAILKDPTDVHNLNQCLEHFKTLQSSCDDDFNSVQSSVEDYEKKIKACREKTEEAKANTVADDEMEILEKELEEEVGKGHLLMEEIR
        N E + S+ D+L+ +L D      L Q LE  + +  SCD+DF  +  S++D +KK+  C+EKT+EA +    ++E+E L+KEL+EE+     L EE+R
Subjt:  NIEELASFADDLVAILKDPTDVHNLNQCLEHFKTLQSSCDDDFNSVQSSVEDYEKKIKACREKTEEAKANTVADDEMEILEKELEEEVGKGHLLMEEIR

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGAGATTTCGCCACAAATTCCAACATTGAGGAGCTCGCATCTTTTGCCGACGATCTGGTAGCAATCTTAAAGGACCCAACTGACGTTCATAACTTGAATCAATGTCT
TGAACATTTCAAGACTCTTCAATCTTCTTGTGACGATGATTTCAATAGTGTTCAAAGCTCAGTTGAAGATTATGAGAAGAAAATTAAAGCATGCCGGGAGAAAACAGAAG
AGGCCAAAGCGAACACTGTTGCAGATGATGAAATGGAGATTCTAGAAAAGGAACTCGAAGAGGAGGTTGGGAAAGGGCATTTGCTCATGGAGGAGATAAGATAA

mRNA sequence

Show/hide mRNA sequence

AAGAACAAATATCGGCCCGAAGCGTAAGTCCCCACTCACCACTGAAGATTCCCCTTTTTCTTCTTCTTCTTCTTCTTCTTCTTCACAGCAACCTCCTTGTTGACGTCTTC
TTCAATTAAGCAAAATGGGAGATTTCGCCACAAATTCCAACATTGAGGAGCTCGCATCTTTTGCCGACGATCTGGTAGCAATCTTAAAGGACCCAACTGACGTTCATAAC
TTGAATCAATGTCTTGAACATTTCAAGACTCTTCAATCTTCTTGTGACGATGATTTCAATAGTGTTCAAAGCTCAGTTGAAGATTATGAGAAGAAAATTAAAGCATGCCG
GGAGAAAACAGAAGAGGCCAAAGCGAACACTGTTGCAGATGATGAAATGGAGATTCTAGAAAAGGAACTCGAAGAGGAGGTTGGGAAAGGGCATTTGCTCATGGAGGAGA
TAAGATAAGTGTAGAATTAACTTTAATTTTGAATTTTTCTTCATGTGATTGTTTGTTCCTAATGTATTTGTGTATGTATATGATGCACCTGGTTTTTTTTCAACACATTG
GTCACCAATGAGATTAATGAGCTAGAACGCCAAAGGGTTTCTGTTCAAGAAAGGAAGCAAGCGATGAAGAAACTTGAGCAACAAGAACTTTGGGCTCAGAGGAAGCTTTC
GATGTATGCTTCGGTCACTGATATCATACCAAACATGGACGATCAGTCTAAAATTTCTGGCCATATTGTGGACAGAAATAAACGAGTTGTCCAAAAGTTTGAATTCGACC
CAACTAAGATATCTTCTTTTGATACATGCAATGGCCTTTGGAATATGATTAATTCCCCATAGTAGAGATATCAATTACATTGTCTTTTGTGAATTAGAAGTTTATTATTG
CTTGGTCCTTTTAGTCACTTCATGGTATTACAATAGAACGCTTATTTTGTTGTGTATGTATGTTTGAAGGACTACTTTCTAAGGTCCTCTTGTATGTGATAACTTATTGT
AAATCAAATCTCCTTGGTCCTTGATGATTATTAAAGAAAAGAATTCCCGTCTATGTTAAGGCACCAATCCATGTAAATGGTGAATGATGTTGCTCATTTTCTTGGATATT
TGAGGCTTGGAAGCAACTAACTTTGTATCTATTCCACTGATCTCAATTCTACTATCTTTTGTAATCTGATTATATTAGTTGTTGAAAATGATTTTTTACTTTCTTTATAG
TTGAGGTTGAAGGCTACTGTTTTAGCTCATATGTTAGTTTGTTACTTTTCTGCTATTAACTTTAATCTTTCTCATTGTATATCTATACTTCCGTGGAGATGACTTAAGTT
TCGGTATTATTTCCTCCACTTTACATCTGTTCATAGCTATGGATGGTACAATGAAAATATTATGACCATGGGATGCTTATGTCTATTCTGATGTAATTCTGAGACAATAT
TCTATGATAATATTACTTATGTTAGAACACGCAGCAAATAGTTTCAAGCCACCCGAAAGCAAGAAGGACAAGAGCTGGCCACCAACTTTCATTCATGATATTAGATTCAA
GCTCCATAAGCTTCATAAAATAGAGTTCAGAATATCAGGTATTGGCGGTTGTCGAGGTTTATAGACTTGCAAGCTTCTGGTACACCA

Protein sequence

Show/hide protein sequence

MGDFATNSNIEELASFADDLVAILKDPTDVHNLNQCLEHFKTLQSSCDDDFNSVQSSVEDYEKKIKACREKTEEAKANTVADDEMEILEKELEEEVGKGHLLMEEIR

MELO3C026013 (gene) of Melon (DHL92) v4 genome