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MELO3C026049 (gene) of Melon (DHL92) v4 genome

Gene IDMELO3C026049
OrganismCucumis melo DHL92 (Melon (DHL92) v4)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr08:27230179..27231955
RNA-Seq ExpressionMELO3C026049
SyntenyMELO3C026049
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036767.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]2.0e-8783.67Show/hide
Query:  MDVTQEYIHWYKNITRLYITQPGAAVGHLRSNNSRLRNVANNPQQILNICNDNEQYMENIHYMYDVPITLAPVQRRCVLVQKPDQLEEVDQHVEEMPLMT
        MDVTQEYIHWYKNI++LYITQPGAA+ HLRSNN RLRNVA++PQQ+LNICNDNEQYMENIHYMYDVPI  APVQRR  LVQ+PDQLEEVDQH +E+P MT
Subjt:  MDVTQEYIHWYKNITRLYITQPGAAVGHLRSNNSRLRNVANNPQQILNICNDNEQYMENIHYMYDVPITLAPVQRRCVLVQKPDQLEEVDQHVEEMPLMT

Query:  QIQSEHSYVSPVMMMSAFGTTYYDLGVGQSSDFGTGYYNSEASPSSSNFGQQYYDLGSDPSSSYMHGHGRGHGEHNEYLYYKVPAAVPEQSDEQQQ
        Q QSEH+YVSPVMMM  FGTTYYD GVGQSSDFG GYYNS+A  SS++FGQQYYDLGSDPSSSYMHGHGRG G+HNEYLYY+VPAAVPEQSDE QQ
Subjt:  QIQSEHSYVSPVMMMSAFGTTYYDLGVGQSSDFGTGYYNSEASPSSSNFGQQYYDLGSDPSSSYMHGHGRGHGEHNEYLYYKVPAAVPEQSDEQQQ

KAA0050408.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]4.7e-10598.47Show/hide
Query:  MDVTQEYIHWYKNITRLYITQPGAAVGHLRSNNSRLRNVANNPQQILNICNDNEQYMENIHYMYDVPITLAPVQRRCVLVQKPDQLEEVDQHVEEMPLMT
        MDVTQEYIHWYKNITRLYITQPGA VGHLRSNNSRLRNVANNPQQILNICNDNEQYMENIHYMYDVPITLAPVQRRC LVQKPDQLEEVDQHVEEMPLMT
Subjt:  MDVTQEYIHWYKNITRLYITQPGAAVGHLRSNNSRLRNVANNPQQILNICNDNEQYMENIHYMYDVPITLAPVQRRCVLVQKPDQLEEVDQHVEEMPLMT

Query:  QIQSEHSYVSPVMMMSAFGTTYYDLGVGQSSDFGTGYYNSEASPSSSNFGQQYYDLGSDPSSSYMHGHGRGHGEHNEYLYYKVPAAVPEQSDEQQQ
        Q QSEHSYVSPVMMMSAFGTTYYDLGVGQSSDFGTGYYNSEASPSSSNFGQQYYDLGSDPSSSYMHGHGRGHGEHNEYLYYKVPAAVPEQSDEQQQ
Subjt:  QIQSEHSYVSPVMMMSAFGTTYYDLGVGQSSDFGTGYYNSEASPSSSNFGQQYYDLGSDPSSSYMHGHGRGHGEHNEYLYYKVPAAVPEQSDEQQQ

TYJ95836.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]2.0e-8783.67Show/hide
Query:  MDVTQEYIHWYKNITRLYITQPGAAVGHLRSNNSRLRNVANNPQQILNICNDNEQYMENIHYMYDVPITLAPVQRRCVLVQKPDQLEEVDQHVEEMPLMT
        MDVTQEYIHWYKNI++LYITQPGAA+ HLRSNN RLRNVA++PQQ+LNICNDNEQYMENIHYMYDVPI  APVQRR  LVQ+PDQLEEVDQH +E+P MT
Subjt:  MDVTQEYIHWYKNITRLYITQPGAAVGHLRSNNSRLRNVANNPQQILNICNDNEQYMENIHYMYDVPITLAPVQRRCVLVQKPDQLEEVDQHVEEMPLMT

Query:  QIQSEHSYVSPVMMMSAFGTTYYDLGVGQSSDFGTGYYNSEASPSSSNFGQQYYDLGSDPSSSYMHGHGRGHGEHNEYLYYKVPAAVPEQSDEQQQ
        Q QSEH+YVSPVMMM  FGTTYYD GVGQSSDFG GYYNS+A  SS++FGQQYYDLGSDPSSSYMHGHGRG G+HNEYLYY+VPAAVPEQSDE QQ
Subjt:  QIQSEHSYVSPVMMMSAFGTTYYDLGVGQSSDFGTGYYNSEASPSSSNFGQQYYDLGSDPSSSYMHGHGRGHGEHNEYLYYKVPAAVPEQSDEQQQ

XP_008449513.1 PREDICTED: mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo]3.4e-8783.84Show/hide
Query:  MDVTQEYIHWYKNITRLYITQPGAAVGHLRSNNSRLRNVANNPQQILNICNDNEQYMENIHYMYDVPITLAPVQRRCVLVQKPDQLEEVDQHVEEMPLM-
        MDVTQEYIHWYKNI++LYITQPGAA+ HLRSNN+RLRN+A++PQQ+LNICNDNEQYMENIHYMYDVPI  APVQRR  LVQ+ DQLEEVDQH EE+P M 
Subjt:  MDVTQEYIHWYKNITRLYITQPGAAVGHLRSNNSRLRNVANNPQQILNICNDNEQYMENIHYMYDVPITLAPVQRRCVLVQKPDQLEEVDQHVEEMPLM-

Query:  -TQIQSEHSYVSPVMMMSAFGTTYYDLGVGQSSDFGTGYYNSEASPSSSNFGQQYYDLGSDPSSSYMHGHGRGHGEHNEYLYYKVPAAVPEQSDEQQQ
         TQ QSEH+YVSPVMMM  FG TYYD GVGQSSDFG GYYNSEA  SS++FGQQYYDLGSDPSSSYMHGHGRG GEHNEYLYYKVPAAVPEQSDEQQQ
Subjt:  -TQIQSEHSYVSPVMMMSAFGTTYYDLGVGQSSDFGTGYYNSEASPSSSNFGQQYYDLGSDPSSSYMHGHGRGHGEHNEYLYYKVPAAVPEQSDEQQQ

XP_016900498.1 PREDICTED: GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo]3.4e-8783.84Show/hide
Query:  MDVTQEYIHWYKNITRLYITQPGAAVGHLRSNNSRLRNVANNPQQILNICNDNEQYMENIHYMYDVPITLAPVQRRCVLVQKPDQLEEVDQHVEEMPLM-
        MDVTQEYIHWYKNI++LYITQPGAA+ HLRSNN+RLRN+A++PQQ+LNICNDNEQYMENIHYMYDVPI  APVQRR  LVQ+ DQLEEVDQH EE+P M 
Subjt:  MDVTQEYIHWYKNITRLYITQPGAAVGHLRSNNSRLRNVANNPQQILNICNDNEQYMENIHYMYDVPITLAPVQRRCVLVQKPDQLEEVDQHVEEMPLM-

Query:  -TQIQSEHSYVSPVMMMSAFGTTYYDLGVGQSSDFGTGYYNSEASPSSSNFGQQYYDLGSDPSSSYMHGHGRGHGEHNEYLYYKVPAAVPEQSDEQQQ
         TQ QSEH+YVSPVMMM  FG TYYD GVGQSSDFG GYYNSEA  SS++FGQQYYDLGSDPSSSYMHGHGRG GEHNEYLYYKVPAAVPEQSDEQQQ
Subjt:  -TQIQSEHSYVSPVMMMSAFGTTYYDLGVGQSSDFGTGYYNSEASPSSSNFGQQYYDLGSDPSSSYMHGHGRGHGEHNEYLYYKVPAAVPEQSDEQQQ

TrEMBL top hitse value%identityAlignment
A0A1S3BLK4 mediator of RNA polymerase II transcription subunit 12-like isoform X11.7e-8783.84Show/hide
Query:  MDVTQEYIHWYKNITRLYITQPGAAVGHLRSNNSRLRNVANNPQQILNICNDNEQYMENIHYMYDVPITLAPVQRRCVLVQKPDQLEEVDQHVEEMPLM-
        MDVTQEYIHWYKNI++LYITQPGAA+ HLRSNN+RLRN+A++PQQ+LNICNDNEQYMENIHYMYDVPI  APVQRR  LVQ+ DQLEEVDQH EE+P M 
Subjt:  MDVTQEYIHWYKNITRLYITQPGAAVGHLRSNNSRLRNVANNPQQILNICNDNEQYMENIHYMYDVPITLAPVQRRCVLVQKPDQLEEVDQHVEEMPLM-

Query:  -TQIQSEHSYVSPVMMMSAFGTTYYDLGVGQSSDFGTGYYNSEASPSSSNFGQQYYDLGSDPSSSYMHGHGRGHGEHNEYLYYKVPAAVPEQSDEQQQ
         TQ QSEH+YVSPVMMM  FG TYYD GVGQSSDFG GYYNSEA  SS++FGQQYYDLGSDPSSSYMHGHGRG GEHNEYLYYKVPAAVPEQSDEQQQ
Subjt:  -TQIQSEHSYVSPVMMMSAFGTTYYDLGVGQSSDFGTGYYNSEASPSSSNFGQQYYDLGSDPSSSYMHGHGRGHGEHNEYLYYKVPAAVPEQSDEQQQ

A0A5A7T598 Serine/threonine-protein phosphatase 7 long form-like protein9.7e-8883.67Show/hide
Query:  MDVTQEYIHWYKNITRLYITQPGAAVGHLRSNNSRLRNVANNPQQILNICNDNEQYMENIHYMYDVPITLAPVQRRCVLVQKPDQLEEVDQHVEEMPLMT
        MDVTQEYIHWYKNI++LYITQPGAA+ HLRSNN RLRNVA++PQQ+LNICNDNEQYMENIHYMYDVPI  APVQRR  LVQ+PDQLEEVDQH +E+P MT
Subjt:  MDVTQEYIHWYKNITRLYITQPGAAVGHLRSNNSRLRNVANNPQQILNICNDNEQYMENIHYMYDVPITLAPVQRRCVLVQKPDQLEEVDQHVEEMPLMT

Query:  QIQSEHSYVSPVMMMSAFGTTYYDLGVGQSSDFGTGYYNSEASPSSSNFGQQYYDLGSDPSSSYMHGHGRGHGEHNEYLYYKVPAAVPEQSDEQQQ
        Q QSEH+YVSPVMMM  FGTTYYD GVGQSSDFG GYYNS+A  SS++FGQQYYDLGSDPSSSYMHGHGRG G+HNEYLYY+VPAAVPEQSDE QQ
Subjt:  QIQSEHSYVSPVMMMSAFGTTYYDLGVGQSSDFGTGYYNSEASPSSSNFGQQYYDLGSDPSSSYMHGHGRGHGEHNEYLYYKVPAAVPEQSDEQQQ

A0A5A7U558 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.3e-10598.47Show/hide
Query:  MDVTQEYIHWYKNITRLYITQPGAAVGHLRSNNSRLRNVANNPQQILNICNDNEQYMENIHYMYDVPITLAPVQRRCVLVQKPDQLEEVDQHVEEMPLMT
        MDVTQEYIHWYKNITRLYITQPGA VGHLRSNNSRLRNVANNPQQILNICNDNEQYMENIHYMYDVPITLAPVQRRC LVQKPDQLEEVDQHVEEMPLMT
Subjt:  MDVTQEYIHWYKNITRLYITQPGAAVGHLRSNNSRLRNVANNPQQILNICNDNEQYMENIHYMYDVPITLAPVQRRCVLVQKPDQLEEVDQHVEEMPLMT

Query:  QIQSEHSYVSPVMMMSAFGTTYYDLGVGQSSDFGTGYYNSEASPSSSNFGQQYYDLGSDPSSSYMHGHGRGHGEHNEYLYYKVPAAVPEQSDEQQQ
        Q QSEHSYVSPVMMMSAFGTTYYDLGVGQSSDFGTGYYNSEASPSSSNFGQQYYDLGSDPSSSYMHGHGRGHGEHNEYLYYKVPAAVPEQSDEQQQ
Subjt:  QIQSEHSYVSPVMMMSAFGTTYYDLGVGQSSDFGTGYYNSEASPSSSNFGQQYYDLGSDPSSSYMHGHGRGHGEHNEYLYYKVPAAVPEQSDEQQQ

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein9.7e-8883.67Show/hide
Query:  MDVTQEYIHWYKNITRLYITQPGAAVGHLRSNNSRLRNVANNPQQILNICNDNEQYMENIHYMYDVPITLAPVQRRCVLVQKPDQLEEVDQHVEEMPLMT
        MDVTQEYIHWYKNI++LYITQPGAA+ HLRSNN RLRNVA++PQQ+LNICNDNEQYMENIHYMYDVPI  APVQRR  LVQ+PDQLEEVDQH +E+P MT
Subjt:  MDVTQEYIHWYKNITRLYITQPGAAVGHLRSNNSRLRNVANNPQQILNICNDNEQYMENIHYMYDVPITLAPVQRRCVLVQKPDQLEEVDQHVEEMPLMT

Query:  QIQSEHSYVSPVMMMSAFGTTYYDLGVGQSSDFGTGYYNSEASPSSSNFGQQYYDLGSDPSSSYMHGHGRGHGEHNEYLYYKVPAAVPEQSDEQQQ
        Q QSEH+YVSPVMMM  FGTTYYD GVGQSSDFG GYYNS+A  SS++FGQQYYDLGSDPSSSYMHGHGRG G+HNEYLYY+VPAAVPEQSDE QQ
Subjt:  QIQSEHSYVSPVMMMSAFGTTYYDLGVGQSSDFGTGYYNSEASPSSSNFGQQYYDLGSDPSSSYMHGHGRGHGEHNEYLYYKVPAAVPEQSDEQQQ

A0A5D3DUI1 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.7e-8783.84Show/hide
Query:  MDVTQEYIHWYKNITRLYITQPGAAVGHLRSNNSRLRNVANNPQQILNICNDNEQYMENIHYMYDVPITLAPVQRRCVLVQKPDQLEEVDQHVEEMPLM-
        MDVTQEYIHWYKNI++LYITQPGAA+ HLRSNN+RLRN+A++PQQ+LNICNDNEQYMENIHYMYDVPI  APVQRR  LVQ+ DQLEEVDQH EE+P M 
Subjt:  MDVTQEYIHWYKNITRLYITQPGAAVGHLRSNNSRLRNVANNPQQILNICNDNEQYMENIHYMYDVPITLAPVQRRCVLVQKPDQLEEVDQHVEEMPLM-

Query:  -TQIQSEHSYVSPVMMMSAFGTTYYDLGVGQSSDFGTGYYNSEASPSSSNFGQQYYDLGSDPSSSYMHGHGRGHGEHNEYLYYKVPAAVPEQSDEQQQ
         TQ QSEH+YVSPVMMM  FG TYYD GVGQSSDFG GYYNSEA  SS++FGQQYYDLGSDPSSSYMHGHGRG GEHNEYLYYKVPAAVPEQSDEQQQ
Subjt:  -TQIQSEHSYVSPVMMMSAFGTTYYDLGVGQSSDFGTGYYNSEASPSSSNFGQQYYDLGSDPSSSYMHGHGRGHGEHNEYLYYKVPAAVPEQSDEQQQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGTAACTCAAGAATACATCCATTGGTACAAAAACATTACTAGACTCTATATCACCCAACCGGGAGCTGCTGTGGGTCATCTGAGATCAAACAATAGTAGA
CTTCGGAATGTTGCAAATAATCCACAACAGATCCTAAATATATGCAACGATAACGAGCAATACATGGAGAACATTCACTATATGTACGATGTCCCTATTACACTT
GCTCCAGTTCAGAGGAGATGTGTTCTAGTCCAAAAGCCTGATCAATTGGAAGAAGTTGACCAACACGTGGAAGAAATGCCTCTCATGACACAGATACAAAGTGAG
CATAGTTACGTTAGTCCAGTAATGATGATGTCAGCATTTGGAACGACATATTATGATTTAGGAGTCGGTCAATCGTCAGACTTTGGAACAGGATATTATAATTCA
GAGGCAAGTCCATCATCATCAAACTTTGGGCAACAATACTATGATTTAGGGAGCGATCCATCATCTTCATACATGCATGGTCACGGACGTGGTCATGGAGAACAT
AATGAATATTTGTACTACAAAGTGCCTGCAGCGGTACCCGAGCAATCAGATGAGCAACAACAATAA
mRNA sequenceShow/hide mRNA sequence
TCACATGTTATGCACAGATATATATTTTACGGTTGATGGGTGGGACTATGCTTGCAGATAAATCAACTCGTTATGTGCACCTAATGTTCCTACCATTCTTAGCTA
ATCTACACCACATGGGGCGATATTCTTCGGGTTGAGCCTGTTTGGCATAGCTATATAGACAATTATGCAAAGCATCCAAACAAGGTATTCGTGAAATTACTAGAC
CACTAATACTGTTACAAATATGGGCTTGGGAACAATTTTCAATAGTGGCTCCATAACTCCTATATGTCAATGCTCATCGATTACACGGTCGAACTTATGATTCAA
GATGGAGAGATCAATTTTGTGTGACCAGATCGACTACACATGTAGTCTCTCAGTATAGGTATATGTTTGATCTTCTTCAACCTAGTCAGATTATCTGGAAGTCGT
ACAAAACTGTCATAGATAGCTTGCCACATTTCTGTACGAATGGTCACGACATAAGACGAACAATTAATTCTGTCATATGTTTCTACATTAAAGGTTTACTGCTAC
AGGACCTCCAGTTGAGCAATTTGATATGGATGTAACTCAAGAATACATCCATTGGTACAAAAACATTACTAGACTCTATATCACCCAACCGGGAGCTGCTGTGGG
TCATCTGAGATCAAACAATAGTAGACTTCGGAATGTTGCAAATAATCCACAACAGATCCTAAATATATGCAACGATAACGAGCAATACATGGAGAACATTCACTA
TATGTACGATGTCCCTATTACACTTGCTCCAGTTCAGAGGAGATGTGTTCTAGTCCAAAAGCCTGATCAATTGGAAGAAGTTGACCAACACGTGGAAGAAATGCC
TCTCATGACACAGATACAAAGTGAGCATAGTTACGTTAGTCCAGTAATGATGATGTCAGCATTTGGAACGACATATTATGATTTAGGAGTCGGTCAATCGTCAGA
CTTTGGAACAGGATATTATAATTCAGAGGCAAGTCCATCATCATCAAACTTTGGGCAACAATACTATGATTTAGGGAGCGATCCATCATCTTCATACATGCATGG
TCACGGACGTGGTCATGGAGAACATAATGAATATTTGTACTACAAAGTGCCTGCAGCGGTACCCGAGCAATCAGATGAGCAACAACAATAAAAGAATCAAGAGGA
AATACAACAACAAAGAGTTCAGAGTCGACGACGACAACTAGCTAAAAATTGTCAACGTCCAAGCTGTGGAACACATTGATTTTTTTCTTTGAACGAAAATTGTTA
AATTATTGTATTAGACATTTTGTTTCATATTTAATTACTTTTCAATCAAAAGCACTTACTACAAATTTATGACCTTCAATTAATACAAAACTAAAAGACTACAAC
GATAAATAT
Protein sequenceShow/hide protein sequence
MDVTQEYIHWYKNITRLYITQPGAAVGHLRSNNSRLRNVANNPQQILNICNDNEQYMENIHYMYDVPITLAPVQRRCVLVQKPDQLEEVDQHVEEMPLMTQIQSE
HSYVSPVMMMSAFGTTYYDLGVGQSSDFGTGYYNSEASPSSSNFGQQYYDLGSDPSSSYMHGHGRGHGEHNEYLYYKVPAAVPEQSDEQQQ